We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
ATP1A2
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • ATP1A2
BRAIN THALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Thalamus
THALAMUS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:515.9 nTPM
HPA:515.9 nTPM
FANTOM5:632.1 Scaled Tags Per Million
Mouse:636.6 nTPM
Allen mouse:10.8 Expression energy

THALAMUS - HPA Brain RNA-seq
Max nTPM 515.9
Sample id Sample description nTPM
Anterior thalamic nucleus, ventral
nTPM: 283.1
2497 Male, age 66, unknown 405.5
2032 Female, age 42, unknown 295.6
2396 Male, age 61, right hemisphere 148.1
Centromedial thalamic nucleus
nTPM: 366.9
2401 Male, age 76, right hemisphere 398.6
2279 Female, age 85, left hemisphere 335.3
Habenula
nTPM: 449.4
2203 Male, age 61, left hemisphere 510.2
2276 Male, age 66, unknown 450.9
1957 Male, age 80, both hemispheres 422.3
2252 Male, age 62, unknown 414.2
Lateral geniculate body
nTPM: 459.8
2857 Male, age 74, right hemisphere 635.5
2399 Male, age 61, left hemisphere 605.4
2659 Male, age 66, unknown 473.0
2035 Female, age 72, unknown 427.8
2841 Male, age 80, both hemispheres 420.6
2575 Female, age 94, right hemisphere 415.1
2106 Female, age 67, right hemisphere 353.6
1953 Male, age 62, unknown 347.9
Lateral thalamic nuclei
nTPM: 455.9
2573 Female, age 94, left hemisphere 572.8
2661 Female, age 72, unknown 539.9
2577 Male, age 74, both hemispheres 469.3
1903 Male, age 76, left hemisphere 361.5
2765 Female, age 67, both hemispheres 336.1
Medial dorsal thalamic nucleus
nTPM: 454.8
2572 Female, age 94, right hemisphere 597.0
2576 Male, age 74, both hemispheres 557.0
2492 Male, age 75, right hemisphere 554.0
1810 Male, age 48, unknown 514.4
2402 Female, age 67, both hemispheres 500.8
2026 Male, age 62, unknown 469.1
2283 Male, age 80, right hemisphere 464.4
2498 Male, age 66, unknown 432.5
2660 Female, age 72, unknown 414.0
1859 Male, age 76, both hemispheres 412.3
2039 Female, age 72, unknown 365.8
1930 Female, age 42, unknown 352.2
1971 Male, age 61, right hemisphere 278.9
Medial geniculate body
nTPM: 453.9
2650 Female, age 94, left hemisphere 571.6
2657 Male, age 74, right hemisphere 488.0
2217 Female, age 72, unknown 458.1
2571 Male, age 75, right hemisphere 454.4
2207 Male, age 80, right hemisphere 453.9
2049 Male, age 76, both hemispheres 401.3
1811 Female, age 42, unknown 349.9
Nucleus reuniens
nTPM: 329.0
2205 Male, age 80, left hemisphere 422.7
2212 Female, age 67, left hemisphere 284.0
2210 Female, age 85, left hemisphere 280.5
Nucleus rhomboideus
nTPM: 362.9
2206 Male, age 80, both hemispheres 470.4
2213 Female, age 67, left hemisphere 314.5
2280 Female, age 85, left hemisphere 304.0
Posterior thalamic nucleus
nTPM: 515.9
2655 Male, age 74, right hemisphere 652.6
2649 Female, age 94, both hemispheres 596.6
2495 Female, age 67, right hemisphere 486.5
2266 Male, age 76, right hemisphere 327.8
Pulvinar
nTPM: 451.1
2724 Male, age 74, right hemisphere 618.3
1932 Male, age 80, right hemisphere 514.8
2582 Female, age 72, unknown 490.6
2398 Male, age 61, left hemisphere 470.7
2496 Female, age 67, right hemisphere 425.7
2499 Male, age 66, unknown 418.8
1899 Female, age 42, unknown 410.3
1972 Male, age 62, unknown 401.1
1929 Male, age 48, unknown 383.1
2214 Male, age 76, right hemisphere 377.4
Subthalamic nucleus
nTPM: 340.2
2282 Male, age 61, both hemispheres 408.2
2216 Male, age 48, unknown 377.9
2056 Female, age 72, unknown 347.8
2124 Male, age 62, unknown 338.9
2658 Male, age 74, both hemispheres 329.3
2406 Female, age 72, unknown 313.4
2779 Female, age 42, unknown 303.9
2275 Male, age 66, unknown 302.0
Ventral posterolateral thalamic nucleus
nTPM: 444.9
2570 Male, age 75, right hemisphere 552.7
2197 Male, age 80, both hemispheres 507.1
2581 Female, age 72, unknown 473.2
2578 Male, age 74, both hemispheres 418.5
2740 Male, age 76, right hemisphere 390.3
2397 Male, age 61, right hemisphere 327.8
Ventral posteromedial thalamic nucleus
nTPM: 437.6
2281 Male, age 75, right hemisphere 542.5
2758 Male, age 80, both hemispheres 484.6
2653 Male, age 74, both hemispheres 462.5
2127 Male, age 76, right hemisphere 396.7
2202 Male, age 61, left hemisphere 301.5
Ventral thalamic nuclei
nTPM: 414.6
2858 Female, age 72, unknown 518.7
2204 Male, age 80, both hemispheres 512.4
2580 Male, age 66, unknown 426.2
2285 Male, age 62, unknown 409.5
2652 Male, age 74, left hemisphere 397.5
1860 Male, age 76, both hemispheres 390.5
2291 Female, age 72, unknown 367.5
1845 Male, age 48, unknown 364.9
1912 Female, age 42, unknown 344.6
Ventromedial nucleus
nTPM: 346.2
1822 Female, age 42, unknown 353.3
1982 Female, age 72, unknown 339.1
Zona incerta
nTPM: 340.1
2208 Male, age 80, right hemisphere 473.9
2663 Female, age 72, unknown 364.0
2403 Male, age 62, unknown 356.7
2822 Male, age 74, right hemisphere 272.8
2215 Male, age 66, unknown 232.9

THALAMUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 632.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Thalamus
Scaled Tags Per Million: 632.1
FF:10154-103A1 76 years, female 632.1

THALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 636.6
Mouse sample Sample description nTPM
Thalamus
nTPM: 636.6
Samples: 4

Max nTPM: 718.8
Min nTPM: 520.4
Sample A Male 520.4
Sample B Male 695.2
Sample C Female 611.8
Sample D Female 718.8

THALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 10.8
Allen experiment id Experiment description Expression energy
Thalamus
Expression energy: 10.8
69173256 Antisense, RP_050329_01_C04, Mouse strain C57BL/6J (56 days, male) 10.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.