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PLEKHB1
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BRAIN THALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Thalamus
THALAMUS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1172.4 nTPM
HPA:1172.4 nTPM
FANTOM5:1481.5 Scaled Tags Per Million
Pig:593.2 nTPM
Mouse:846.0 nTPM
Allen mouse:3.9 Expression energy

THALAMUS - Annotated protein expression
Pending normal tissue analysis

THALAMUS - HPA Brain RNA-seq
Max nTPM 1172.4
Sample id Sample description nTPM
Anterior thalamic nucleus, ventral
nTPM: 919.9
2497 Male, age 66, unknown 1009.7
2032 Female, age 42, unknown 977.6
2396 Male, age 61, right hemisphere 772.5
Centromedial thalamic nucleus
nTPM: 1091.3
2279 Female, age 85, left hemisphere 1178.7
2401 Male, age 76, right hemisphere 1003.8
Habenula
nTPM: 933.4
2252 Male, age 62, unknown 979.0
2276 Male, age 66, unknown 935.0
1957 Male, age 80, both hemispheres 916.9
2203 Male, age 61, left hemisphere 902.6
Lateral geniculate body
nTPM: 1086.8
2841 Male, age 80, both hemispheres 1234.3
2575 Female, age 94, right hemisphere 1227.2
2857 Male, age 74, right hemisphere 1119.7
2659 Male, age 66, unknown 1115.1
2035 Female, age 72, unknown 1069.7
2399 Male, age 61, left hemisphere 1020.1
2106 Female, age 67, right hemisphere 981.8
1953 Male, age 62, unknown 926.2
Lateral thalamic nuclei
nTPM: 1106.8
2661 Female, age 72, unknown 1174.6
2573 Female, age 94, left hemisphere 1158.4
2577 Male, age 74, both hemispheres 1151.3
2765 Female, age 67, both hemispheres 1040.6
1903 Male, age 76, left hemisphere 1008.8
Medial dorsal thalamic nucleus
nTPM: 1006.5
2572 Female, age 94, right hemisphere 1309.7
2660 Female, age 72, unknown 1122.5
2576 Male, age 74, both hemispheres 1064.7
1859 Male, age 76, both hemispheres 1055.0
2039 Female, age 72, unknown 1002.9
2492 Male, age 75, right hemisphere 986.0
1810 Male, age 48, unknown 975.5
2402 Female, age 67, both hemispheres 962.9
1930 Female, age 42, unknown 951.8
2026 Male, age 62, unknown 950.0
2283 Male, age 80, right hemisphere 945.5
2498 Male, age 66, unknown 939.0
1971 Male, age 61, right hemisphere 818.8
Medial geniculate body
nTPM: 1042.9
2571 Male, age 75, right hemisphere 1165.6
2650 Female, age 94, left hemisphere 1089.7
2217 Female, age 72, unknown 1084.5
2207 Male, age 80, right hemisphere 1076.7
2657 Male, age 74, right hemisphere 1041.9
2049 Male, age 76, both hemispheres 1017.1
1811 Female, age 42, unknown 824.5
Nucleus reuniens
nTPM: 1120.1
2210 Female, age 85, left hemisphere 1360.9
2205 Male, age 80, left hemisphere 1126.5
2212 Female, age 67, left hemisphere 873.0
Nucleus rhomboideus
nTPM: 1102.9
2280 Female, age 85, left hemisphere 1391.0
2206 Male, age 80, both hemispheres 976.7
2213 Female, age 67, left hemisphere 941.0
Posterior thalamic nucleus
nTPM: 1122.0
2649 Female, age 94, both hemispheres 1491.1
2655 Male, age 74, right hemisphere 1110.0
2266 Male, age 76, right hemisphere 955.3
2495 Female, age 67, right hemisphere 931.6
Pulvinar
nTPM: 1021.8
2724 Male, age 74, right hemisphere 1091.1
1932 Male, age 80, right hemisphere 1071.3
2582 Female, age 72, unknown 1043.0
2496 Female, age 67, right hemisphere 1041.7
2398 Male, age 61, left hemisphere 1040.7
2214 Male, age 76, right hemisphere 1013.3
2499 Male, age 66, unknown 1002.7
1899 Female, age 42, unknown 973.7
1972 Male, age 62, unknown 971.4
1929 Male, age 48, unknown 969.2
Subthalamic nucleus
nTPM: 1172.4
2282 Male, age 61, both hemispheres 1317.5
2216 Male, age 48, unknown 1298.3
2056 Female, age 72, unknown 1275.3
2124 Male, age 62, unknown 1201.5
2658 Male, age 74, both hemispheres 1170.7
2275 Male, age 66, unknown 1154.3
2779 Female, age 42, unknown 1100.8
2406 Female, age 72, unknown 860.8
Ventral posterolateral thalamic nucleus
nTPM: 1051.2
2581 Female, age 72, unknown 1123.1
2570 Male, age 75, right hemisphere 1121.4
2578 Male, age 74, both hemispheres 1113.5
2740 Male, age 76, right hemisphere 1055.5
2197 Male, age 80, both hemispheres 952.2
2397 Male, age 61, right hemisphere 941.8
Ventral posteromedial thalamic nucleus
nTPM: 1027.8
2653 Male, age 74, both hemispheres 1133.1
2281 Male, age 75, right hemisphere 1119.0
2127 Male, age 76, right hemisphere 1095.8
2758 Male, age 80, both hemispheres 933.7
2202 Male, age 61, left hemisphere 857.4
Ventral thalamic nuclei
nTPM: 1095.1
2291 Female, age 72, unknown 1177.0
2580 Male, age 66, unknown 1175.4
2652 Male, age 74, left hemisphere 1148.1
2858 Female, age 72, unknown 1143.5
2204 Male, age 80, both hemispheres 1119.2
1845 Male, age 48, unknown 1058.9
1860 Male, age 76, both hemispheres 1057.2
2285 Male, age 62, unknown 1001.5
1912 Female, age 42, unknown 974.9
Ventromedial nucleus
nTPM: 797.5
1982 Female, age 72, unknown 817.5
1822 Female, age 42, unknown 777.4
Zona incerta
nTPM: 1089.7
2822 Male, age 74, right hemisphere 1228.8
2663 Female, age 72, unknown 1101.1
2403 Male, age 62, unknown 1086.8
2215 Male, age 66, unknown 1065.8
2208 Male, age 80, right hemisphere 966.0

THALAMUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1481.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Thalamus
Scaled Tags Per Million: 1481.5
FF:10154-103A1 76 years, female 1481.5

THALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 593.2
Pig sample Sample description nTPM
Thalamus
nTPM: 593.2
Samples: 4

Max nTPM: 978.9
Min nTPM: 376.0
Sample A Female 475.6
Sample B Female 376.0
Sample C Male 542.1
Sample D Male 978.9

THALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 846.0
Mouse sample Sample description nTPM
Thalamus
nTPM: 846.0
Samples: 4

Max nTPM: 954.5
Min nTPM: 771.0
Sample A Male 853.6
Sample B Male 804.7
Sample C Female 954.5
Sample D Female 771.0

THALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 3.9
Allen experiment id Experiment description Expression energy
Thalamus
Expression energy: 3.9
71836842 Antisense, RP_051017_02_C05, Mouse strain C57BL/6J (56 days, male) 5.6
68196931 Antisense, RP_041116_01_F10, Mouse strain C57BL/6J (56 days, male) 2.1

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