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PLEKHB1
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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
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Consensus:1472.5 nTPM
HPA:1472.5 nTPM
FANTOM5:1381.6 Scaled Tags Per Million
Pig:830.8 nTPM
Allen mouse:4.7 Expression energy

MEDULLA OBLONGATA - Annotated protein expression
Pending normal tissue analysis

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 1472.5
Sample id Sample description nTPM
Area postrema
nTPM: 1306.0
2799 Male, age 61, both hemispheres 1530.2
2306 Male, age 80, both hemispheres 1350.9
2054 Male, age 76, both hemispheres 1037.0
Cuneate nuclei
nTPM: 1221.7
2376 Male, age 61, both hemispheres 1286.2
2381 Male, age 80, both hemispheres 1279.0
2131 Male, age 76, both hemispheres 1099.7
Dorsal medullary reticular nucleus
nTPM: 1185.7
2373 Male, age 61, both hemispheres 1269.9
2088 Male, age 76, both hemispheres 1171.1
2040 Female, age 85, both hemispheres 1116.1
Dorsal motor vagal complex
nTPM: 1153.6
2797 Male, age 61, both hemispheres 1646.1
2185 Male, age 76, both hemispheres 1280.2
2643 Male, age 74, both hemispheres 1143.4
2807 Female, age 85, both hemispheres 1098.5
2844 Male, age 55, unknown 1041.1
2000 Male, age 74, unknown 1034.0
2813 Female, age 72, unknown 1020.4
2133 Female, age 91, both hemispheres 965.0
Gigantocellular reticular nuclei, medullary
nTPM: 1152.3
2314 Male, age 61, both hemispheres 1594.6
2387 Female, age 91, both hemispheres 1155.7
1876 Female, age 85, both hemispheres 1136.4
2310 Male, age 80, both hemispheres 1094.2
2022 Male, age 76, right hemisphere 1013.5
2462 Male, age 74, both hemispheres 919.4
Gigantocellular reticular nuclei, pars
nTPM: 1106.9
2336 Male, age 61, both hemispheres 1170.0
2330 Male, age 80, both hemispheres 1138.5
2706 Male, age 80, both hemispheres 1132.9
2084 Female, age 85, both hemispheres 1128.6
2168 Male, age 76, both hemispheres 964.6
Inferior olive
nTPM: 1379.8
2178 Male, age 61, both hemispheres 1452.3
2085 Female, age 85, both hemispheres 1433.4
2379 Male, age 80, both hemispheres 1362.1
2628 Female, age 91, both hemispheres 1352.3
2563 Male, age 74, both hemispheres 1299.2
Lateral medullary reticular nucleus
nTPM: 1300.2
2374 Male, age 61, both hemispheres 1427.1
2852 Male, age 80, both hemispheres 1412.8
2804 Female, age 91, both hemispheres 1335.3
2190 Female, age 85, both hemispheres 1285.7
2305 Male, age 74, both hemispheres 1241.7
2044 Male, age 76, both hemispheres 1098.4
Medial vestibular nucleus
nTPM: 1135.4
2624 Male, age 61, both hemispheres 1246.9
2803 Female, age 91, both hemispheres 1213.0
2801 Male, age 74, both hemispheres 1196.8
2093 Male, age 80, both hemispheres 1155.4
2743 Female, age 85, both hemispheres 1048.2
2134 Male, age 76, both hemispheres 952.0
Motor hypoglossal nucleus
nTPM: 1083.5
2182 Male, age 80, both hemispheres 1200.3
2125 Female, age 91, both hemispheres 1166.6
2132 Female, age 85, both hemispheres 1152.5
2461 Male, age 61, both hemispheres 975.7
2277 Male, age 76, both hemispheres 922.3
Nucleus ambiguus
nTPM: 1282.3
2071 Male, age 76, both hemispheres 1451.1
2096 Female, age 85, both hemispheres 1113.5
Nucleus cuneatus
nTPM: 1320.0
2380 Male, age 80, both hemispheres 1481.0
2808 Female, age 85, both hemispheres 1419.2
2805 Female, age 91, both hemispheres 1318.1
2100 Male, age 76, both hemispheres 1296.6
2564 Male, age 74, both hemispheres 1258.6
2562 Male, age 61, both hemispheres 1146.8
Nucleus gracilis
nTPM: 1354.1
2382 Male, age 80, both hemispheres 1423.8
2299 Female, age 85, both hemispheres 1341.5
2627 Male, age 74, both hemispheres 1296.9
Nucleus raphe magnus
nTPM: 984.6
2051 Male, age 76, both hemispheres 1109.2
2328 Male, age 80, both hemispheres 1070.4
2459 Female, age 91, both hemispheres 1037.2
2455 Male, age 74, both hemispheres 966.2
2160 Male, age 61, both hemispheres 892.5
2172 Female, age 85, both hemispheres 832.2
Nucleus raphe obscurus
nTPM: 1472.5
2142 Male, age 76, midline 1532.2
2845 Female, age 85, midline 1473.6
2800 Male, age 61, midline 1411.6
Nucleus raphe pallidus
nTPM: 1281.3
2145 Male, age 76, midline 1445.9
1924 Male, age 61, midline 1280.8
2183 Male, age 80, midline 1117.2
Nucleus tractus solitarii
nTPM: 921.3
2191 Female, age 85, both hemispheres 975.2
2656 Male, age 76, both hemispheres 935.9
2307 Male, age 80, both hemispheres 900.1
2144 Female, age 91, right hemisphere 874.2
Parvicellular reticular nuclei
nTPM: 1121.4
2095 Male, age 76, both hemispheres 1245.5
2119 Male, age 80, both hemispheres 1148.2
2558 Male, age 74, both hemispheres 970.6
Parvicellular reticular nuclei, medullary
nTPM: 1055.5
2189 Female, age 91, both hemispheres 1081.2
2091 Female, age 85, both hemispheres 1060.1
2181 Male, age 80, left hemisphere 1025.3
Peritrigeminal nucleus
nTPM: 1226.2
2136 Male, age 76, both hemispheres 1278.2
2067 Female, age 85, both hemispheres 1229.5
2179 Male, age 61, both hemispheres 1170.7
Prepositus hypoglossal nucleus
nTPM: 1150.1
2855 Female, age 85, right hemisphere 1303.2
2086 Male, age 80, both hemispheres 997.0
Spinal trigeminal nucleus, caudal
nTPM: 1163.8
2312 Male, age 61, both hemispheres 1277.1
2308 Male, age 80, both hemispheres 1241.7
2447 Male, age 76, both hemispheres 1166.1
2642 Male, age 74, both hemispheres 1088.2
2390 Female, age 91, both hemispheres 1046.1
Spinal trigeminal nucleus, interpolar
nTPM: 1036.8
2389 Female, age 91, both hemispheres 1064.0
2033 Male, age 80, both hemispheres 1057.3
2625 Male, age 61, both hemispheres 1038.5
2066 Male, age 76, right hemisphere 1012.3
2386 Female, age 85, both hemispheres 1011.9
Spinal vestibular nucleus
nTPM: 1179.2
2806 Female, age 85, both hemispheres 1286.0
2384 Male, age 74, both hemispheres 1261.1
2748 Male, age 76, both hemispheres 1200.4
2796 Male, age 61, both hemispheres 1164.2
2780 Male, age 80, both hemispheres 1085.3
2186 Female, age 91, both hemispheres 1078.3
Ventral medullary reticular nucleus
nTPM: 1282.2
2372 Male, age 61, both hemispheres 1417.5
2060 Male, age 76, both hemispheres 1146.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 1206.4
2180 Male, age 61, both hemispheres 1288.7
2118 Male, age 80, both hemispheres 1259.6
2302 Female, age 91, both hemispheres 1256.2
1986 Male, age 76, both hemispheres 1154.3
2741 Female, age 85, both hemispheres 1073.0

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 1381.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 1381.6
FF:10038-101F2 18-64 years, mixed 1864.4
FF:10155-103A2 76 years, female 1296.7
FF:10174-103C3 60 years, female 983.8

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 830.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 830.8
Samples: 4

Max nTPM: 1025.9
Min nTPM: 662.3
Sample A Female 662.3
Sample B Female 695.4
Sample C Male 939.7
Sample D Male 1025.9

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 4.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.7
71836842 Antisense, RP_051017_02_C05, Mouse strain C57BL/6J (56 days, male) 8.4
68196931 Antisense, RP_041116_01_F10, Mouse strain C57BL/6J (56 days, male) 0.9

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.