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PLEKHB1
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BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1263.6 nTPM
HPA:1263.6 nTPM
GTEx:2745.2 nTPM
FANTOM5:1683.8 Scaled Tags Per Million
Pig:1149.9 nTPM

SPINAL CORD - Annotated protein expression
Pending normal tissue analysis

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 1263.6
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 1164.2
1981 Female, age 72, midline 1240.8
2048 Male, age 55, midline 1207.9
2816 Male, age 47, midline 1186.9
2194 Female, age 79, both hemispheres 1106.2
2565 Male, age 75, midline 1079.0
Cervical spinal cord, dorsal horn
nTPM: 1111.0
2296 Male, age 66, both hemispheres 1423.7
2173 Female, age 72, unknown 1338.6
1877 Male, age 55, unknown 1120.6
2069 Male, age 47, both hemispheres 1037.4
2721 Male, age 90, both hemispheres 920.1
2297 Male, age 75, both hemispheres 825.8
Cervical spinal cord, ventral horn
nTPM: 1263.6
2098 Female, age 72, unknown 1390.1
2480 Male, age 75, both hemispheres 1339.8
2809 Male, age 90, both hemispheres 1318.4
2295 Male, age 66, both hemispheres 1258.9
2068 Male, age 55, unknown 1140.9
2820 Female, age 79, both hemispheres 1133.4

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 2745.2
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 2745.2
Samples: 159

Max nTPM: 5953.5
Min nTPM: 821.3
Std nTPM: 992.5
Median nTPM: 2656.9
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 5953.5
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 5895.6
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 5839.2
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 4862.7
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 4749.8
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 4713.5
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 4656.4
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 4613.0
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 4464.2
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 4456.4
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 4414.9
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 4318.0
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 4290.3
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 4190.9
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 4148.1
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 4135.1
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 4100.5
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 4064.9
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 3952.0
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 3946.7
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 3905.5
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 3903.4
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 3830.1
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 3742.0
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 3738.8
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 3674.9
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 3630.1
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 3628.2
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 3620.7
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 3566.1
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 3560.7
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 3458.2
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 3410.7
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 3400.9
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 3367.8
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 3342.0
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 3324.0
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 3309.7
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 3227.3
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 3223.6
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 3204.4
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 3193.8
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 3182.4
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 3165.5
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 3124.9
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 3120.2
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 3115.4
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 3109.6
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 3095.7
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 3088.5
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 3088.2
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 3081.2
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 3071.6
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 3057.8
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 3025.5
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 3012.6
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 3008.6
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 2993.9
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 2988.9
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 2988.1
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 2985.5
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 2971.3
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 2946.1
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 2941.6
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 2941.2
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 2863.2
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 2862.6
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 2819.8
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 2812.0
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 2807.7
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 2806.6
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 2805.8
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 2769.1
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 2764.3
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 2741.7
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 2729.9
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 2705.1
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 2679.8
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 2660.7
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 2656.9
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 2647.9
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 2610.1
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 2606.0
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 2605.7
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 2588.9
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 2584.7
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 2546.0
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 2525.7
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 2525.4
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 2517.1
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 2511.8
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 2501.0
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 2438.8
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 2435.8
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 2419.6
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 2404.6
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 2399.0
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 2384.1
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 2369.5
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 2362.7
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 2354.9
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 2348.7
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 2346.9
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 2332.7
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 2330.8
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 2329.2
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 2315.2
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 2280.6
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 2265.1
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 2259.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 2231.2
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 2213.3
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 2184.1
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 2146.6
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 2142.1
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 2135.6
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 2124.7
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 2102.2
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 2100.2
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 2098.2
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 2079.6
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 2015.3
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 1991.5
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 1984.5
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 1969.2
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 1954.8
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 1934.0
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 1927.9
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1921.3
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 1854.8
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 1841.0
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 1831.2
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 1808.0
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 1793.8
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 1757.5
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1741.2
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 1705.1
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 1667.1
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 1586.5
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 1584.7
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 1550.0
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 1532.1
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 1509.4
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 1505.6
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 1432.2
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 1418.9
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 1413.7
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1374.0
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 1362.0
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 1344.4
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1326.1
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 1253.4
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 1192.7
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 1159.4
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 1135.1
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 1037.8
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 1035.1
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 896.8
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 821.3
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1683.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 1683.8
FF:10159-103A6 76 years, female 1998.9
FF:10181-103D1 60 years, female 1368.7

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1149.9
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 925.5
Samples: 4

Max nTPM: 1091.0
Min nTPM: 683.7
Sample A Female 683.7
Sample B Female 996.7
Sample C Male 1091.0
Sample D Male 930.6
Ventral spinal cord
nTPM: 1149.9
Samples: 4

Max nTPM: 1373.2
Min nTPM: 955.1
Sample A Female 955.1
Sample B Female 1129.4
Sample C Male 1141.9
Sample D Male 1373.2

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