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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:193.8 nTPM
FANTOM5:315.8 Scaled Tags Per Million
Pig:44.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody CAB005052
Glial cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 193.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 193.8
Samples: 246

Max nTPM: 342.7
Min nTPM: 124.5
Std nTPM: 43.6
Median nTPM: 184.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 342.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 337.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 329.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 322.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 310.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 301.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 297.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 291.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 282.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 279.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 279.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 277.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 271.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 270.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 264.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 262.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 260.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 260.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 259.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 258.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 257.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 256.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 254.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 253.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 252.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 250.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 249.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 248.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 246.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 246.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 245.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 245.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 244.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 243.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 241.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 241.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 239.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 239.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 239.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 237.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 236.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 235.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 235.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 234.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 233.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 231.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 230.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 230.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 229.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 229.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 228.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 228.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 226.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 226.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 224.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 224.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 224.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 224.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 223.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 223.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 223.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 222.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 222.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 221.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 220.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 220.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 220.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 220.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 220.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 220.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 218.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 218.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 218.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 217.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 217.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 217.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 217.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 215.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 213.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 212.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 212.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 211.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 211.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 210.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 210.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 210.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 208.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 207.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 206.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 205.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 204.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 204.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 204.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 202.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 201.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 200.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 198.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 198.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 198.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 197.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 196.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 195.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 195.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 195.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 193.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 192.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 191.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 191.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 191.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 191.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 191.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 191.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 190.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 190.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 189.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 189.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 188.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 187.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 187.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 186.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 185.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 185.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 184.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 184.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 184.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 184.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 184.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 183.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 182.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 182.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 182.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 182.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 180.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 180.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 180.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 180.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 180.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 180.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 179.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 179.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 177.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 176.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 176.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 176.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 175.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 175.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 174.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 173.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 173.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 172.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 171.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 171.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 170.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 170.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 169.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 169.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 169.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 169.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 168.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 168.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 167.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 166.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 166.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 165.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 165.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 164.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 164.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 163.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 163.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 163.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 162.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 162.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 162.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 162.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 161.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 161.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 160.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 160.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 159.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 159.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 159.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 159.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 158.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 158.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 158.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 158.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 158.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 158.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 158.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 158.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 157.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 157.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 157.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 157.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 157.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 157.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 156.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 156.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 156.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 156.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 155.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 154.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 154.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 153.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 152.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 152.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 151.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 151.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 151.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 150.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 150.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 150.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 150.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 149.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 149.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 148.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 148.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 148.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 148.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 147.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 147.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 147.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 146.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 146.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 145.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 144.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 143.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 139.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 139.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 139.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 138.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 137.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 137.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 137.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 136.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 135.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 134.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 134.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 132.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 131.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 127.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 126.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 126.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 125.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 125.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 124.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 315.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 315.8
FF:10164-103B2 76 years, female 315.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 44.5
Pig sample Sample description nTPM
Caudate
nTPM: 44.6
Samples: 4

Max nTPM: 48.8
Min nTPM: 40.5
Sample A Female 45.2
Sample B Female 43.7
Sample C Male 48.8
Sample D Male 40.5

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