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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:1233.0 nTPM
FANTOM5:2128.6 Scaled Tags Per Million
Pig:1242.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA041264Antibody HPA041271Antibody CAB002621
Glial cells Not detectedNot detectedMedium
Neuronal cells LowNot detectedMedium







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1233.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 1233.0
Samples: 246

Max nTPM: 2433.5
Min nTPM: 543.0
Std nTPM: 323.1
Median nTPM: 1221.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 2433.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 2208.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 2149.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 2054.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1965.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 1945.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 1936.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 1885.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 1885.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 1809.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1807.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1807.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1804.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 1773.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1755.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1755.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 1746.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1743.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1726.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1710.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1708.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1688.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 1642.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 1642.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 1625.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1622.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1617.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1604.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 1601.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1597.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1587.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1586.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 1573.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 1565.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1552.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 1531.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 1526.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 1515.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1515.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 1512.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1511.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1507.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 1502.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1500.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 1497.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1493.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1487.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 1487.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1483.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1475.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1473.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 1473.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 1472.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1472.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 1470.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 1469.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 1469.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 1464.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1464.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 1462.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 1461.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1459.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1459.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1457.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 1456.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 1454.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 1451.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 1441.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 1441.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1441.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 1428.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 1427.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 1422.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 1418.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1414.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1394.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1394.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 1387.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1387.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 1385.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 1381.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 1378.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1377.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1375.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1375.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1374.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1365.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 1365.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 1358.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 1358.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 1351.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1351.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 1347.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 1345.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 1343.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1339.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 1332.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1323.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 1314.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 1303.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 1290.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 1290.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1288.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 1288.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1288.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1287.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 1279.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 1278.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1277.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 1274.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 1268.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 1256.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1249.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 1245.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1243.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 1242.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 1237.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 1235.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 1233.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 1226.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 1226.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1225.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 1223.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 1218.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 1212.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 1201.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 1200.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1197.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1194.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 1184.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 1180.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 1179.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 1176.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 1169.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 1167.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 1167.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 1158.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 1156.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 1152.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1140.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 1140.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 1133.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 1126.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 1125.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1121.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1115.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 1112.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 1111.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 1111.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 1107.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 1106.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1104.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 1096.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 1095.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1081.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1081.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1079.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 1077.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 1068.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 1056.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 1056.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 1054.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1046.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1044.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1043.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1042.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 1039.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 1038.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 1036.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 1031.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 1029.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 1027.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1026.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1022.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 1022.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1013.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 1012.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 1012.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1008.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 1008.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 1005.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 998.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 997.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 996.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 995.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 995.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 995.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 994.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 993.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 978.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 968.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 968.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 960.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 948.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 944.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 939.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 936.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 936.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 935.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 932.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 929.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 924.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 923.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 921.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 920.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 914.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 905.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 901.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 901.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 885.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 883.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 879.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 873.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 873.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 871.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 870.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 869.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 861.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 857.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 855.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 828.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 824.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 822.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 818.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 816.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 808.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 800.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 791.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 790.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 786.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 775.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 770.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 762.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 758.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 758.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 739.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 729.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 728.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 715.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 714.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 685.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 683.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 660.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 643.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 634.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 543.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 2128.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 2128.6
FF:10164-103B2 76 years, female 2128.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1242.5
Pig sample Sample description nTPM
Caudate
nTPM: 1242.5
Samples: 4

Max nTPM: 1424.5
Min nTPM: 1072.1
Sample A Female 1132.5
Sample B Female 1340.8
Sample C Male 1424.5
Sample D Male 1072.1

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