PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:2654.8 nTPM
HPA:2654.8 nTPM
FANTOM5:2953.2 Scaled Tags Per Million
Pig:1902.7 nTPM
Mouse:641.0 nTPM
Allen mouse:21.1 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 2654.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 2270.9
2301 Female, age 85, both hemispheres 2478.2
2090 Male, age 80, both hemispheres 2376.7
2188 Female, age 91, both hemispheres 2247.4
1984 Male, age 76, both hemispheres 1981.1
Area postrema
nTPM: 2313.5
2799 Male, age 61, both hemispheres 2610.5
2306 Male, age 80, both hemispheres 2240.6
2054 Male, age 76, both hemispheres 2089.5
Cuneate nuclei
nTPM: 2181.0
2376 Male, age 61, both hemispheres 2247.1
2131 Male, age 76, both hemispheres 2149.3
2381 Male, age 80, both hemispheres 2146.5
Dorsal cochlear nucleus
nTPM: 2224.1
2187 Female, age 91, both hemispheres 2391.3
2370 Male, age 61, both hemispheres 2309.4
2378 Male, age 80, both hemispheres 2147.3
2802 Male, age 74, right hemisphere 2140.5
2058 Male, age 76, both hemispheres 2132.1
Dorsal medullary reticular nucleus
nTPM: 2153.5
2040 Female, age 85, both hemispheres 2163.0
2088 Male, age 76, both hemispheres 2156.2
2373 Male, age 61, both hemispheres 2141.4
Dorsal motor vagal complex
nTPM: 2148.4
2133 Female, age 91, both hemispheres 2281.3
2813 Female, age 72, unknown 2233.0
2185 Male, age 76, both hemispheres 2227.8
2000 Male, age 74, unknown 2179.8
2807 Female, age 85, both hemispheres 2140.1
2643 Male, age 74, both hemispheres 2134.1
2844 Male, age 55, unknown 2068.5
2797 Male, age 61, both hemispheres 1922.9
Dorsal tegmental nucleus
nTPM: 2412.0
2358 Male, age 61, both hemispheres 3027.8
2326 Male, age 74, both hemispheres 2343.2
2083 Male, age 80, both hemispheres 2229.4
1936 Male, age 76, left hemisphere 2047.4
Dorsolateral tegmental area
nTPM: 2275.7
2337 Male, age 61, both hemispheres 2860.3
2654 Male, age 80, both hemispheres 2222.6
2360 Male, age 74, both hemispheres 2173.5
2751 Female, age 85, both hemispheres 2172.8
2141 Male, age 76, both hemispheres 1949.2
Gigantocellular reticular nuclei, medullary
nTPM: 2187.0
2314 Male, age 61, both hemispheres 2460.7
2462 Male, age 74, both hemispheres 2223.1
2310 Male, age 80, both hemispheres 2178.2
2387 Female, age 91, both hemispheres 2113.8
1876 Female, age 85, both hemispheres 2099.4
2022 Male, age 76, right hemisphere 2046.5
Gigantocellular reticular nuclei, pars
nTPM: 2139.7
2336 Male, age 61, both hemispheres 2283.2
2330 Male, age 80, both hemispheres 2148.0
2706 Male, age 80, both hemispheres 2105.4
2084 Female, age 85, both hemispheres 2087.7
2168 Male, age 76, both hemispheres 2074.2
Inferior olive
nTPM: 2404.5
2563 Male, age 74, both hemispheres 2582.6
2178 Male, age 61, both hemispheres 2497.6
2085 Female, age 85, both hemispheres 2370.9
2628 Female, age 91, both hemispheres 2330.4
2379 Male, age 80, both hemispheres 2241.1
Kolliker-Fuse nucleus
nTPM: 2320.3
2793 Female, age 91, left hemisphere 2344.7
2163 Male, age 80, both hemispheres 2339.6
2315 Male, age 76, right hemisphere 2276.5
Lateral lemniscal nuclei
nTPM: 2152.5
2746 Female, age 85, left hemisphere 2225.0
2453 Male, age 74, right hemisphere 2163.9
2169 Male, age 76, both hemispheres 2151.2
2320 Female, age 91, left hemisphere 2131.0
2036 Male, age 80, both hemispheres 2091.7
Lateral medullary reticular nucleus
nTPM: 2511.4
2305 Male, age 74, both hemispheres 3234.4
2374 Male, age 61, both hemispheres 2459.7
2852 Male, age 80, both hemispheres 2445.8
2804 Female, age 91, both hemispheres 2363.6
2190 Female, age 85, both hemispheres 2322.1
2044 Male, age 76, both hemispheres 2242.8
Lateral parabrachial nucleus
nTPM: 2243.8
2792 Male, age 76, both hemispheres 2351.5
2013 Male, age 80, both hemispheres 2256.6
2790 Male, age 61, both hemispheres 2243.3
2139 Female, age 85, right hemisphere 2123.6
Lateral vestibular nucleus
nTPM: 2288.3
2311 Male, age 80, both hemispheres 2358.5
2184 Male, age 76, both hemispheres 2218.2
Locus coeruleus
nTPM: 2094.8
2123 Female, age 91, both hemispheres 2206.3
2720 Male, age 74, both hemispheres 2164.3
2162 Male, age 80, both hemispheres 2132.1
1980 Male, age 76, both hemispheres 2100.3
2317 Female, age 72, unknown 2075.1
2014 Male, age 55, unknown 2070.3
2788 Male, age 74, unknown 1915.0
Medial olivary nucleus
nTPM: 2569.2
1943 Male, age 61, both hemispheres 2841.2
1962 Male, age 76, both hemispheres 2546.2
2138 Female, age 91, both hemispheres 2451.0
2851 Male, age 80, both hemispheres 2438.6
Medial parabrachial nucleus
nTPM: 2263.8
2170 Female, age 91, both hemispheres 2540.8
2854 Male, age 80, both hemispheres 2298.3
2156 Male, age 61, both hemispheres 2251.6
2786 Male, age 76, both hemispheres 2151.1
2463 Female, age 85, right hemisphere 2077.3
Medial periolivary nuclei
nTPM: 2202.4
2081 Male, age 80, both hemispheres 2325.9
2791 Male, age 74, right hemisphere 2325.4
2458 Female, age 91, both hemispheres 2141.7
2063 Male, age 76, both hemispheres 2141.4
2171 Female, age 85, both hemispheres 2077.6
Medial vestibular nucleus
nTPM: 2294.9
2624 Male, age 61, both hemispheres 2607.5
2801 Male, age 74, both hemispheres 2568.3
2803 Female, age 91, both hemispheres 2193.1
2134 Male, age 76, both hemispheres 2176.6
2093 Male, age 80, both hemispheres 2127.4
2743 Female, age 85, both hemispheres 2096.3
Motor facial nucleus
nTPM: 2163.5
2365 Male, age 74, right hemisphere 2478.1
2697 Female, age 85, both hemispheres 2218.4
2126 Male, age 61, both hemispheres 2215.4
2062 Male, age 76, both hemispheres 2132.4
2795 Female, age 91, both hemispheres 2008.5
2327 Male, age 80, both hemispheres 1928.0
Motor hypoglossal nucleus
nTPM: 2271.2
2182 Male, age 80, both hemispheres 2347.2
2461 Male, age 61, both hemispheres 2345.7
2132 Female, age 85, both hemispheres 2262.0
2125 Female, age 91, both hemispheres 2258.5
2277 Male, age 76, both hemispheres 2142.7
Motor trigeminal nucleus
nTPM: 2211.0
2335 Male, age 61, both hemispheres 2458.4
2560 Male, age 74, both hemispheres 2255.0
2321 Female, age 91, both hemispheres 2171.9
2309 Male, age 76, both hemispheres 2105.9
2079 Male, age 80, both hemispheres 2063.7
Nuclei of the trapezoid body
nTPM: 2072.7
1983 Male, age 76, both hemispheres 2170.5
2159 Male, age 61, both hemispheres 2089.0
2166 Male, age 80, both hemispheres 2064.1
2735 Female, age 85, both hemispheres 2053.6
2368 Female, age 91, both hemispheres 1986.5
Nucleus ambiguus
nTPM: 2388.2
2071 Male, age 76, both hemispheres 2448.5
2096 Female, age 85, both hemispheres 2327.9
Nucleus cuneatus
nTPM: 2210.9
2808 Female, age 85, both hemispheres 2453.3
2564 Male, age 74, both hemispheres 2362.6
2380 Male, age 80, both hemispheres 2205.3
2100 Male, age 76, both hemispheres 2184.3
2562 Male, age 61, both hemispheres 2063.0
2805 Female, age 91, both hemispheres 1997.1
Nucleus gracilis
nTPM: 2344.5
2627 Male, age 74, both hemispheres 2504.7
2299 Female, age 85, both hemispheres 2317.4
2382 Male, age 80, both hemispheres 2211.3
Nucleus raphe magnus
nTPM: 2123.8
2455 Male, age 74, both hemispheres 2306.8
2051 Male, age 76, both hemispheres 2241.9
2160 Male, age 61, both hemispheres 2074.1
2328 Male, age 80, both hemispheres 2042.4
2172 Female, age 85, both hemispheres 2039.2
2459 Female, age 91, both hemispheres 2038.4
Nucleus raphe obscurus
nTPM: 2416.3
2845 Female, age 85, midline 2459.9
2800 Male, age 61, midline 2412.4
2142 Male, age 76, midline 2376.5
Nucleus raphe pallidus
nTPM: 2654.8
1924 Male, age 61, midline 3111.0
2145 Male, age 76, midline 2463.7
2183 Male, age 80, midline 2389.6
Nucleus tractus solitarii
nTPM: 2066.2
2191 Female, age 85, both hemispheres 2262.8
2656 Male, age 76, both hemispheres 2097.0
2307 Male, age 80, both hemispheres 2010.4
2144 Female, age 91, right hemisphere 1894.6
Paramedian reticular nucleus
nTPM: 2163.6
2313 Male, age 61, both hemispheres 2219.2
2057 Male, age 80, both hemispheres 2195.2
2052 Male, age 76, both hemispheres 2145.7
2050 Female, age 85, both hemispheres 2094.6
Parvicellular reticular nuclei
nTPM: 2201.3
2119 Male, age 80, both hemispheres 2295.6
2095 Male, age 76, both hemispheres 2208.8
2558 Male, age 74, both hemispheres 2099.5
Parvicellular reticular nuclei, medullary
nTPM: 2207.0
2091 Female, age 85, both hemispheres 2282.8
2189 Female, age 91, both hemispheres 2251.2
2181 Male, age 80, left hemisphere 2087.1
Peritrigeminal nucleus
nTPM: 2436.4
2067 Female, age 85, both hemispheres 2588.1
2179 Male, age 61, both hemispheres 2381.1
2136 Male, age 76, both hemispheres 2339.9
Pontine nuclei
nTPM: 2271.8
2454 Male, age 74, left hemisphere 2384.6
2109 Female, age 72, unknown 2378.4
2115 Male, age 80, left hemisphere 2359.4
2319 Female, age 91, both hemispheres 2323.9
1863 Male, age 55, unknown 2288.8
2787 Female, age 85, both hemispheres 2198.9
1968 Male, age 76, left hemisphere 2179.6
2727 Male, age 61, right hemisphere 2060.6
Pontine raphe nucleus
nTPM: 2020.0
2853 Male, age 76, midline 2026.2
2122 Female, age 85, midline 2013.8
Posteroventral cochlear nucleus
nTPM: 2311.8
2341 Male, age 80, both hemispheres 2435.5
2135 Female, age 91, both hemispheres 2419.5
2371 Male, age 61, both hemispheres 2380.7
2070 Male, age 76, both hemispheres 2246.4
2752 Female, age 85, both hemispheres 2076.8
Prepositus hypoglossal nucleus
nTPM: 2194.0
2855 Female, age 85, right hemisphere 2245.9
2086 Male, age 80, both hemispheres 2142.0
Principal sensory trigeminal nucleus
nTPM: 2131.5
2367 Female, age 91, left hemisphere 2271.4
2324 Male, age 76, both hemispheres 2248.6
2158 Male, age 61, both hemispheres 2020.1
2008 Male, age 80, left hemisphere 1985.9
Reticular pontine nucleus, caudal
nTPM: 2130.6
2559 Male, age 74, both hemispheres 2351.9
2092 Male, age 76, both hemispheres 2192.4
2457 Female, age 91, both hemispheres 2071.2
2332 Male, age 80, right hemisphere 1907.0
Reticular pontine nucleus, oral
nTPM: 2181.6
2361 Male, age 74, both hemispheres 2377.8
1939 Male, age 80, both hemispheres 2197.7
2167 Male, age 76, both hemispheres 2149.2
2366 Female, age 91, both hemispheres 2115.8
2012 Female, age 85, both hemispheres 2067.5
Reticulotegmental nucleus
nTPM: 2193.0
2452 Male, age 74, both hemispheres 2283.1
2322 Female, age 91, both hemispheres 2266.9
2333 Male, age 80, both hemispheres 2163.9
2325 Male, age 76, both hemispheres 2058.0
Spinal trigeminal nucleus, caudal
nTPM: 2286.7
2312 Male, age 61, both hemispheres 2319.3
2642 Male, age 74, both hemispheres 2317.8
2390 Female, age 91, both hemispheres 2298.4
2447 Male, age 76, both hemispheres 2253.2
2308 Male, age 80, both hemispheres 2244.6
Spinal trigeminal nucleus, interpolar
nTPM: 2265.1
2625 Male, age 61, both hemispheres 2574.8
2066 Male, age 76, right hemisphere 2245.3
2033 Male, age 80, both hemispheres 2240.5
2386 Female, age 85, both hemispheres 2185.0
2389 Female, age 91, both hemispheres 2079.9
Spinal trigeminal nucleus, oral
nTPM: 2184.2
2164 Male, age 80, both hemispheres 2231.8
2737 Female, age 85, both hemispheres 2186.5
1978 Male, age 76, both hemispheres 2134.3
Spinal vestibular nucleus
nTPM: 2228.8
2796 Male, age 61, both hemispheres 2414.7
2748 Male, age 76, both hemispheres 2282.9
2186 Female, age 91, both hemispheres 2180.5
2780 Male, age 80, both hemispheres 2179.8
2806 Female, age 85, both hemispheres 2173.0
2384 Male, age 74, both hemispheres 2142.0
Subcoeruleus area
nTPM: 2187.3
2323 Female, age 91, left hemisphere 2272.7
2451 Male, age 74, both hemispheres 2259.4
2369 Female, age 85, left hemisphere 2200.5
1958 Male, age 80, both hemispheres 2115.7
2089 Male, age 76, left hemisphere 2088.3
Superior olive
nTPM: 2163.4
2364 Male, age 74, right hemisphere 2450.3
2020 Male, age 76, both hemispheres 2175.1
2561 Female, age 91, both hemispheres 2138.2
2329 Male, age 80, right hemisphere 2036.8
1875 Female, age 85, both hemispheres 2016.3
Superior vestibular nucleus
nTPM: 2208.1
2383 Male, age 74, both hemispheres 2234.4
2015 Male, age 80, both hemispheres 2224.4
2061 Male, age 76, both hemispheres 2165.5
Ventral medullary reticular nucleus
nTPM: 2206.5
2372 Male, age 61, both hemispheres 2217.2
2060 Male, age 76, both hemispheres 2195.9
Ventral periolivary nuclei
nTPM: 2102.0
2023 Male, age 76, both hemispheres 2159.2
2130 Female, age 85, both hemispheres 2118.0
2794 Female, age 91, left hemisphere 2094.0
2165 Male, age 80, both hemispheres 2036.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 2364.7
2741 Female, age 85, both hemispheres 2411.5
2180 Male, age 61, both hemispheres 2410.6
2302 Female, age 91, both hemispheres 2370.9
2118 Male, age 80, both hemispheres 2326.5
1986 Male, age 76, both hemispheres 2303.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 2215.4
2359 Male, age 61, both hemispheres 2378.1
2449 Male, age 74, both hemispheres 2248.3
2840 Female, age 85, both hemispheres 2244.8
2161 Male, age 80, both hemispheres 2190.6
1959 Male, age 76, both hemispheres 2131.3
2456 Female, age 91, both hemispheres 2099.3

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 2953.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 2347.9
FF:10182-103D2 60 years, female 2874.8
FF:10165-103B3 76 years, female 1821.0
Medulla oblongata
Scaled Tags Per Million: 2909.8
FF:10038-101F2 18-64 years, mixed 4413.3
FF:10174-103C3 60 years, female 2207.1
FF:10155-103A2 76 years, female 2108.9
Pons
Scaled Tags Per Million: 2953.2
FF:10033-101E6 18-54 years, mixed 2953.2

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 1902.7
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 1902.7
Samples: 4

Max nTPM: 2213.6
Min nTPM: 1539.6
Sample A Female 1800.0
Sample B Female 1539.6
Sample C Male 2213.6
Sample D Male 2057.7
Pons
nTPM: 1732.3
Samples: 4

Max nTPM: 1934.5
Min nTPM: 1256.6
Sample A Female 1927.7
Sample B Female 1256.6
Sample C Male 1810.4
Sample D Male 1934.5

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 641.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 641.0
Samples: 4

Max nTPM: 681.6
Min nTPM: 613.9
Sample A Male 681.6
Sample B Male 613.9
Sample C Female 650.4
Sample D Female 618.0

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 21.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 20.8
74881516 Antisense, RP_060315_04_C04, Mouse strain C57BL/6J (56 days, male) 23.6
81600126 Antisense, RP_080306_03_B07, Mouse strain C57BL/6J (56 days, male) 21.2
69514684 Antisense, RP_050419_03_H03, Mouse strain C57BL/6J (56 days, male) 17.5
Pons
Expression energy: 21.1
74881516 Antisense, RP_060315_04_C04, Mouse strain C57BL/6J (56 days, male) 24.1
81600126 Antisense, RP_080306_03_B07, Mouse strain C57BL/6J (56 days, male) 20.4
69514684 Antisense, RP_050419_03_H03, Mouse strain C57BL/6J (56 days, male) 18.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.