We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
HSP90AA1
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • HSP90AA1
BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1188.2 nTPM
HPA:1188.2 nTPM
GTEx:599.8 nTPM
FANTOM5:1254.4 Scaled Tags Per Million
Pig:426.5 nTPM
Mouse:815.7 nTPM
Allen mouse:20.5 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 1188.2
Sample id Sample description nTPM
Amygdala
nTPM: 1188.2
2814 Male, age 76, right hemisphere 1248.2
2514 Male, age 75, right hemisphere 1207.5
1987 Female, age 91, left hemisphere 1184.4
2517 Female, age 94, left hemisphere 1152.5
2695 Female, age 67, right hemisphere 1148.6
Basal amygdala
nTPM: 1118.4
2609 Male, age 75, right hemisphere 1167.2
2110 Male, age 80, left hemisphere 1154.1
1955 Male, age 76, both hemispheres 1122.5
2243 Female, age 91, right hemisphere 1100.2
2827 Female, age 67, right hemisphere 1083.9
2685 Female, age 94, left hemisphere 1082.8
Central amygdala
nTPM: 1150.1
1905 Male, age 76, both hemispheres 1188.6
2515 Male, age 75, right hemisphere 1175.4
2826 Female, age 94, left hemisphere 1156.4
2239 Male, age 80, left hemisphere 1130.5
2701 Female, age 91, right hemisphere 1099.4
Corticomedial amygdala
nTPM: 1112.0
2428 Male, age 75, right hemisphere 1165.4
2829 Male, age 80, left hemisphere 1153.1
2240 Male, age 76, both hemispheres 1133.8
2429 Female, age 94, left hemisphere 1095.6
2242 Female, age 91, right hemisphere 1079.5
2535 Female, age 67, right hemisphere 1044.5
Lateral amygdala
nTPM: 1133.2
1883 Male, age 76, both hemispheres 1215.6
2516 Male, age 75, right hemisphere 1184.6
2534 Female, age 94, left hemisphere 1141.5
2830 Female, age 67, right hemisphere 1116.2
2256 Male, age 80, left hemisphere 1094.3
2255 Female, age 91, right hemisphere 1046.7
Stria terminalis, bed nucleus
nTPM: 1131.8
1974 Female, age 91, both hemispheres 1190.5
2201 Male, age 74, unknown 1124.1
2486 Female, age 94, both hemispheres 1080.8

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 599.8
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 599.8
Samples: 152

Max nTPM: 4496.0
Min nTPM: 250.7
Std nTPM: 501.0
Median nTPM: 465.2
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 4496.0
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 2698.3
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 2620.0
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 2301.7
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 2062.9
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 1651.1
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 1587.0
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 1536.6
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 1434.2
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 1309.5
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 1191.0
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 1135.9
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 956.5
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 909.0
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 901.0
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 896.4
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 842.7
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 813.1
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 799.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 723.4
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 720.2
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 718.9
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 716.0
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 704.2
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 683.3
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 681.1
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 656.6
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 648.1
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 639.7
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 630.2
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 623.1
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 614.7
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 601.7
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 596.7
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 592.7
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 590.6
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 588.7
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 586.3
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 574.2
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 573.9
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 573.3
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 563.3
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 558.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 554.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 554.8
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 542.4
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 539.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 539.2
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 533.8
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 526.0
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 520.2
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 518.3
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 517.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 512.0
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 506.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 505.0
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 504.7
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 504.3
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 504.3
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 500.6
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 497.7
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 492.9
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 492.1
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 492.0
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 491.6
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 490.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 486.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 486.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 484.2
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 480.4
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 479.4
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 473.9
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 472.3
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 472.0
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 467.5
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 466.0
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 464.5
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 463.2
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 453.1
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 452.6
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 446.3
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 443.5
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 443.4
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 439.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 437.6
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 437.5
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 436.5
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 434.3
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 434.0
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 432.3
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 431.6
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 430.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 429.8
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 428.9
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 428.0
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 424.0
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 421.3
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 421.2
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 417.7
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 416.0
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 412.0
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 411.6
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 408.9
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 408.6
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 408.4
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 407.3
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 405.6
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 405.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 403.7
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 402.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 401.9
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 400.0
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 393.1
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 393.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 390.2
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 390.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 389.6
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 387.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 385.8
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 384.6
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 383.4
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 380.2
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 377.8
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 376.7
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 371.8
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 368.9
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 367.5
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 366.5
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 365.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 361.9
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 361.2
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 360.7
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 360.0
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 355.9
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 354.7
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 351.2
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 349.3
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 345.5
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 337.3
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 336.3
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 334.3
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 331.2
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 323.8
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 314.8
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 313.0
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 300.0
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 297.1
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 296.4
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 293.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 265.7
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 251.1
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 250.7
Show allShow less

AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1254.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 1254.4
FF:10151-102I7 76 years, female 1254.4

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 426.5
Pig sample Sample description nTPM
Amygdala
nTPM: 426.5
Samples: 4

Max nTPM: 540.5
Min nTPM: 375.3
Sample A Female 540.5
Sample B Female 413.9
Sample C Male 376.1
Sample D Male 375.3

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 815.7
Mouse sample Sample description nTPM
Amygdala
nTPM: 815.7
Samples: 4

Max nTPM: 895.4
Min nTPM: 777.2
Sample A Male 895.4
Sample B Male 777.2
Sample C Female 777.3
Sample D Female 812.8

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 20.5
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 20.5
69012681 Antisense, RP_050309_01_C05, Mouse strain C57BL/6J (56 days, male) 20.5

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.