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HSP90AA1
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  • HSP90AA1
BRAIN RETINA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Eye
Retina
RETINA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1127.6 nTPM
GTEx:1127.6 nTPM
FANTOM5:373.0 Scaled Tags Per Million
Pig:543.4 nTPM
Mouse:1812.6 nTPM

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1127.6
GTEx sample id Sample description nTPM
Retina
Average nTPM: 1127.6
Samples: 105

Max nTPM: 2614.9
Min nTPM: 631.0
Std nTPM: 347.8
Median nTPM:
99_1 64 years, male 2614.9
491_1 89 years, female 2526.6
490_1 67 years, female 2061.6
379_1 60 years, male 1767.7
415_1 77 years, female 1711.4
447_1 81 years, male 1702.5
162_1 79 years, female 1634.6
42_1 85 years, male 1548.3
317_1 60 years, male 1543.5
32_1 67 years, male 1535.3
347_1 72 years, male 1533.8
413_1 59 years, female 1499.3
117_1 61 years, male 1488.7
120_1 70 years, female 1483.6
386_1 76 years, male 1454.5
375_1 74 years, female 1449.1
315_1 62 years, female 1390.0
115_1 83 years, male 1388.4
109_1 81 years, female 1365.9
142_1 61 years, female 1363.5
355_1 70 years, female 1362.9
265_1 87 years, male 1358.0
414_1 84 years, female 1352.1
6_1 73 years, female 1346.2
119_1 70 years, female 1332.6
266_1 85 years, male 1328.4
352_1 62 years, male 1314.5
9_1 66 years, female 1307.6
324_1 76 years, male 1298.8
43_1 64 years, female 1296.2
468_1 89 years, male 1285.9
217_1 76 years, male 1271.4
172_1 72 years, female 1269.6
229_1 69 years, female 1269.3
149_1 88 years, male 1250.4
396_1 62 years, male 1241.4
307_1 66 years, female 1219.3
89_1 63 years, male 1212.9
126_1 63 years, male 1203.8
173_1 67 years, male 1162.9
246_1 77 years, male 1147.0
254_1 77 years, female 1143.2
153_1 70 years, female 1131.8
466_1 57 years, female 1129.8
349_1 83 years, male 1126.8
480_1 63 years, male 1125.2
526_1 61 years, male 1124.8
389_1 86 years, female 1124.5
404_1 82 years, female 1124.4
237_1 82 years, male 1092.8
243_1 75 years, male 1089.0
321_1 62 years, female 1086.7
313_1 79 years, female 1084.7
384_1 83 years, male 1084.1
189_1 76 years, male 1057.9
35_1 74 years, female 1052.1
145_1 84 years, male 1043.1
314_1 67 years, male 1031.4
177_1 74 years, male 1022.1
41_1 94 years, female 998.6
348_1 84 years, male 997.2
316_1 62 years, male 991.4
376_1 75 years, female 988.5
286_1 68 years, female 984.9
499_1 55 years, female 978.5
319_1 81 years, male 974.4
354_1 81 years, female 969.0
291_1 76 years, male 956.0
311_1 78 years, male 935.4
308_1 70 years, female 922.4
518_1 75 years, female 921.0
350_1 84 years, female 918.2
503_1 68 years, male 912.9
335_1 73 years, female 906.1
405_1 91 years, male 903.7
501_1 88 years, male 899.5
17_1 71 years, male 897.5
394_1 75 years, female 894.9
356_1 87 years, female 893.2
425_1 59 years, female 864.5
139_1 64 years, female 859.8
81_1 67 years, male 856.4
377_1 82 years, female 849.2
351_1 91 years, male 844.0
452_1 88 years, female 833.0
18_1 88 years, male 821.3
137_1 83 years, male 814.7
163_1 78 years, male 798.3
292_1 71 years, male 796.8
251_1 78 years, male 796.4
495_1 57 years, female 792.9
4_1 88 years, female 773.8
353_1 82 years, female 772.8
218_1 71 years, female 761.1
264_1 73 years, female 759.3
2_1 77 years, female 758.6
288_1 66 years, female 754.0
517_1 88 years, male 743.8
406_1 79 years, male 743.6
506_1 65 years, male 733.8
318_1 68 years, male 728.7
320_1 89 years, female 636.2
295_1 61 years, female 633.6
293_1 68 years, female 631.0
322_1 76 years, male 631.0
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 373.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 373.0
FF:10030-101E3 24-65 years, mixed 373.0

RETINA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 543.4
Pig sample Sample description nTPM
Retina
nTPM: 543.4
Samples: 4

Max nTPM: 607.3
Min nTPM: 502.7
Sample A Female 531.2
Sample B Female 502.7
Sample C Male 607.3
Sample D Male 532.4

RETINA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1812.6
Mouse sample Sample description nTPM
Retina
nTPM: 1812.6
Samples: 4

Max nTPM: 1945.0
Min nTPM: 1691.4
Sample A Male 1774.2
Sample B Male 1691.4
Sample C Female 1839.6
Sample D Female 1945.0

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.