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RPS5
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:497.5 nTPM
FANTOM5:256.2 Scaled Tags Per Million
Pig:143.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA055878Antibody HPA061979
Glial cells Not detectedMedium
Neuronal cells MediumMedium




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 497.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 497.5
Samples: 246

Max nTPM: 1343.5
Min nTPM: 231.0
Std nTPM: 145.0
Median nTPM: 469.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1343.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1207.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 991.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 985.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 888.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 852.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 838.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 834.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 816.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 812.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 800.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 790.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 783.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 716.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 716.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 707.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 698.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 692.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 686.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 680.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 677.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 672.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 666.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 665.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 664.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 660.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 660.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 656.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 655.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 648.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 639.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 635.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 624.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 622.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 621.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 618.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 616.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 614.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 613.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 613.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 609.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 609.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 603.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 595.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 595.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 595.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 594.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 593.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 588.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 579.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 578.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 577.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 571.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 569.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 568.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 565.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 564.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 563.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 562.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 562.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 561.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 560.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 560.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 559.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 553.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 553.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 553.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 551.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 550.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 549.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 548.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 544.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 539.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 539.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 536.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 536.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 535.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 535.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 534.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 533.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 529.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 529.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 527.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 527.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 526.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 525.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 523.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 522.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 520.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 520.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 519.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 514.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 508.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 507.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 507.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 506.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 503.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 503.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 501.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 500.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 498.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 497.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 496.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 496.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 495.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 495.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 492.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 489.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 488.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 481.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 481.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 481.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 479.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 479.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 479.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 476.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 475.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 475.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 475.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 475.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 473.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 470.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 469.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 468.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 465.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 465.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 464.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 463.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 462.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 461.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 461.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 459.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 459.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 458.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 454.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 453.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 453.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 450.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 450.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 449.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 449.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 446.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 446.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 445.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 444.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 443.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 442.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 441.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 441.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 440.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 436.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 435.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 435.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 432.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 432.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 431.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 429.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 428.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 427.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 427.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 426.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 425.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 425.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 424.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 422.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 420.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 420.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 420.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 420.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 420.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 420.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 419.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 419.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 418.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 417.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 417.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 415.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 414.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 414.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 413.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 412.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 411.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 408.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 407.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 405.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 403.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 402.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 401.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 401.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 397.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 393.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 391.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 391.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 391.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 391.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 388.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 388.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 386.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 385.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 384.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 381.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 380.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 379.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 376.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 374.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 373.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 372.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 370.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 370.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 368.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 368.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 368.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 367.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 364.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 363.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 362.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 362.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 360.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 359.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 359.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 359.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 358.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 358.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 358.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 357.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 354.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 347.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 347.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 345.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 341.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 338.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 337.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 334.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 327.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 323.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 320.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 319.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 316.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 311.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 301.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 301.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 295.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 278.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 272.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 254.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 231.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 256.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 256.2
FF:10164-103B2 76 years, female 256.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 143.3
Pig sample Sample description nTPM
Caudate
nTPM: 143.3
Samples: 4

Max nTPM: 160.4
Min nTPM: 121.6
Sample A Female 136.6
Sample B Female 154.7
Sample C Male 160.4
Sample D Male 121.6

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