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RPLP0
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN ORAL MUCOSA OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:323.0 nTPM
FANTOM5:34.7 Scaled Tags Per Million
Pig:206.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA003512Antibody HPA073501
Glial cells Not detectedLow
Neuronal cells LowHigh




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 323.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 323.0
Samples: 246

Max nTPM: 803.7
Min nTPM: 156.2
Std nTPM: 85.2
Median nTPM: 307.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 803.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 624.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 623.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 598.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 590.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 576.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 552.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 541.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 540.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 503.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 490.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 486.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 483.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 472.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 472.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 471.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 462.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 456.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 445.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 443.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 439.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 433.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 429.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 428.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 427.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 426.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 426.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 421.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 418.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 418.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 417.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 410.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 410.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 407.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 402.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 402.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 399.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 397.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 394.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 393.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 391.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 380.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 379.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 378.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 374.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 370.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 367.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 367.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 367.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 365.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 365.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 364.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 364.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 363.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 362.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 358.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 355.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 355.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 354.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 353.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 353.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 353.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 348.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 347.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 346.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 346.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 345.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 345.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 345.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 344.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 344.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 342.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 342.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 341.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 340.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 340.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 340.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 339.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 339.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 338.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 336.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 336.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 336.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 336.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 335.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 334.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 334.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 333.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 332.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 332.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 331.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 331.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 330.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 330.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 326.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 325.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 324.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 324.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 322.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 322.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 322.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 322.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 322.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 322.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 321.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 320.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 319.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 317.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 316.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 315.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 312.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 312.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 312.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 312.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 312.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 311.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 310.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 310.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 309.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 309.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 308.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 308.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 307.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 307.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 307.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 306.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 306.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 305.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 304.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 304.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 303.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 303.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 302.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 302.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 302.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 302.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 299.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 299.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 297.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 297.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 296.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 294.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 294.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 293.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 293.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 293.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 291.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 291.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 290.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 289.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 289.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 289.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 288.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 287.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 286.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 285.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 284.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 284.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 283.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 282.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 282.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 281.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 280.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 279.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 278.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 278.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 277.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 276.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 276.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 276.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 275.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 274.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 274.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 273.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 273.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 273.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 273.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 272.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 272.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 271.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 270.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 268.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 268.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 266.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 265.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 264.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 264.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 264.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 264.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 264.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 262.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 262.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 261.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 260.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 259.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 259.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 258.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 258.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 258.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 254.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 253.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 253.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 253.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 252.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 251.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 250.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 250.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 248.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 248.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 248.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 247.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 246.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 245.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 245.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 245.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 244.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 244.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 242.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 242.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 241.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 241.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 241.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 238.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 238.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 237.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 236.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 236.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 234.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 234.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 232.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 229.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 229.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 228.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 226.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 220.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 220.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 218.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 218.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 216.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 214.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 213.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 212.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 196.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 193.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 173.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 156.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 34.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 34.7
FF:10164-103B2 76 years, female 34.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 206.7
Pig sample Sample description nTPM
Caudate
nTPM: 206.7
Samples: 4

Max nTPM: 225.5
Min nTPM: 183.7
Sample A Female 200.5
Sample B Female 225.5
Sample C Male 217.0
Sample D Male 183.7

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