HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:349.1 nTPM
HPA:349.1 nTPM
GTEx:455.4 nTPM
FANTOM5:377.2 Scaled Tags Per Million
Pig:157.0 nTPM
Mouse:0.2 nTPM
Allen mouse:12.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012107
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 349.1
Sample id Sample description nTPM
Hippocampus
nTPM: 322.7
1898 Male, age 80, left hemisphere 359.9
1911 Female, age 85, right hemisphere 351.7
2529 Female, age 94, left hemisphere 346.5
2621 Female, age 67, right hemisphere 305.7
1855 Male, age 76, left hemisphere 293.9
2148 Female, age 91, left hemisphere 278.4
Dentate gyrus
nTPM: 331.5
2530 Female, age 94, left hemisphere 406.4
2528 Male, age 74, both hemispheres 383.6
2010 Male, age 76, both hemispheres 363.7
2246 Female, age 85, both hemispheres 326.3
2531 Female, age 67, both hemispheres 280.5
1927 Female, age 91, both hemispheres 228.7
Entorhinal gyrus
nTPM: 319.1
2117 Female, age 91, right hemisphere 394.5
2686 Male, age 75, right hemisphere 351.3
2764 Male, age 80, right hemisphere 327.5
1938 Female, age 85, left hemisphere 315.1
2613 Female, age 94, left hemisphere 277.7
1787 Male, age 76, left hemisphere 248.6
Hippocampus, CA1
nTPM: 306.0
2749 Male, age 80, left hemisphere 348.5
1873 Female, age 85, both hemispheres 343.0
2527 Male, age 74, both hemispheres 342.4
2082 Female, age 91, right hemisphere 275.9
2045 Male, age 76, both hemispheres 220.1
Hippocampus, CA2
nTPM: 324.3
1963 Male, age 80, left hemisphere 404.9
2249 Male, age 74, both hemispheres 381.6
2437 Female, age 94, left hemisphere 333.9
1940 Female, age 85, left hemisphere 304.9
2113 Female, age 91, right hemisphere 286.9
1892 Male, age 76, both hemispheres 233.7
Hippocampus, CA3
nTPM: 287.0
1891 Female, age 85, both hemispheres 384.7
2436 Male, age 74, both hemispheres 294.4
2861 Female, age 67, both hemispheres 275.7
1867 Male, age 76, both hemispheres 275.5
2137 Male, age 80, left hemisphere 248.9
2620 Female, age 94, left hemisphere 243.1
Parahippocampal cortex
nTPM: 277.9
2692 Male, age 74, both hemispheres 338.3
2532 Female, age 72, left hemisphere 322.0
1933 Female, age 85, both hemispheres 288.4
2018 Male, age 76, both hemispheres 272.1
1990 Female, age 91, right hemisphere 269.7
2693 Female, age 94, both hemispheres 266.3
1850 Male, age 80, both hemispheres 262.2
2250 Female, age 67, right hemisphere 257.7
2622 Female, age 67, right hemisphere 255.8
2245 Female, age 91, both hemispheres 246.0
Perirhinal gyrus
nTPM: 218.5
2848 Male, age 76, right hemisphere 236.9
2521 Female, age 94, right hemisphere 231.3
1794 Male, age 80, right hemisphere 216.0
1847 Female, age 91, left hemisphere 213.5
1841 Female, age 85, right hemisphere 194.6
Subiculum
nTPM: 349.1
2042 Male, age 76, both hemispheres 456.9
1901 Male, age 80, both hemispheres 356.8
1977 Female, age 85, both hemispheres 355.1
2438 Female, age 94, left hemisphere 319.4
2729 Female, age 91, right hemisphere 313.3
2619 Male, age 74, both hemispheres 293.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 455.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 455.4
Samples: 197

Max nTPM: 1443.4
Min nTPM: 27.7
Std nTPM: 211.4
Median nTPM: 429.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1443.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1096.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 1063.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 1026.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 1007.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 904.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 892.7
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 869.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 854.5
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 840.0
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 836.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 377.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 377.2
FF:10169-103B7 60 years, female 444.7
FF:10153-102I9 76 years, female 309.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 157.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 134.2
Samples: 4

Max nTPM: 151.3
Min nTPM: 106.4
Sample A Female 151.3
Sample B Female 127.9
Sample C Male 151.2
Sample D Male 106.4
Entorhinal cortex
nTPM: 128.0
Samples: 4

Max nTPM: 158.0
Min nTPM: 102.6
Sample A Female 102.6
Sample B Female 158.0
Sample C Male 137.5
Sample D Male 113.7
Subiculum
nTPM: 157.1
Samples: 4

Max nTPM: 171.2
Min nTPM: 141.6
Sample A Female 146.3
Sample B Female 169.1
Sample C Male 171.2
Sample D Male 141.6
Ventral hippocampus
nTPM: 151.5
Samples: 4

Max nTPM: 205.5
Min nTPM: 123.2
Sample A Female 123.2
Sample B Female 139.9
Sample C Male 205.5
Sample D Male 137.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 608.3
Samples: 4

Max nTPM: 671.4
Min nTPM: 549.6
Sample A Male 671.4
Sample B Male 549.6
Sample C Female 598.1
Sample D Female 614.1
Hippocampal formation
nTPM: 637.2
Samples: 4

Max nTPM: 704.3
Min nTPM: 611.9
Sample A Male 617.5
Sample B Male 611.9
Sample C Female 704.3
Sample D Female 615.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.9
74819250 Antisense, RP_060315_02_D02, Mouse strain C57BL/6J (56 days, male) 13.3
68633119 Antisense, RP_050125_02_D10, Mouse strain C57BL/6J (56 days, male) 12.5
75863344 Antisense, RP_060601_03_C07, Mouse strain C57BL/6J (56 days, male) 0.2
Hippocampal formation
Expression energy: 12.9
74819250 Antisense, RP_060315_02_D02, Mouse strain C57BL/6J (56 days, male) 13.3
68633119 Antisense, RP_050125_02_D10, Mouse strain C57BL/6J (56 days, male) 12.5
75863344 Antisense, RP_060601_03_C07, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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