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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:249.2 nTPM
FANTOM5:55.7 Scaled Tags Per Million
Pig:19.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA045101
Glial cells Medium
Neuronal cells Low



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 249.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 249.2
Samples: 246

Max nTPM: 565.0
Min nTPM: 74.8
Std nTPM: 81.6
Median nTPM: 234.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 565.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 547.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 525.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 465.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 463.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 455.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 443.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 440.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 439.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 419.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 410.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 404.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 401.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 399.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 396.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 389.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 385.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 381.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 375.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 374.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 372.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 370.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 369.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 367.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 362.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 362.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 358.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 358.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 354.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 352.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 350.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 346.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 345.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 343.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 343.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 343.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 336.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 329.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 328.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 327.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 325.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 324.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 320.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 316.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 314.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 313.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 307.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 307.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 305.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 304.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 298.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 296.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 295.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 294.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 294.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 292.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 292.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 288.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 285.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 285.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 284.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 283.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 283.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 282.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 281.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 281.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 280.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 279.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 277.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 277.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 277.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 276.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 276.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 275.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 275.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 273.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 272.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 272.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 271.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 269.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 269.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 267.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 266.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 266.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 266.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 266.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 265.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 265.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 264.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 264.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 263.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 261.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 261.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 261.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 260.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 258.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 257.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 257.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 256.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 255.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 254.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 254.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 253.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 252.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 252.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 251.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 249.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 249.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 246.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 244.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 244.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 244.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 244.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 243.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 242.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 242.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 241.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 241.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 240.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 240.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 239.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 239.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 235.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 233.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 232.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 232.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 231.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 231.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 231.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 231.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 230.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 230.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 230.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 229.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 228.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 228.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 228.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 227.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 225.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 225.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 221.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 221.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 221.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 219.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 219.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 219.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 217.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 217.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 217.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 217.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 214.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 213.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 211.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 209.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 209.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 209.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 208.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 208.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 208.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 206.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 206.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 205.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 205.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 204.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 204.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 203.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 202.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 202.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 202.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 201.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 200.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 199.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 199.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 199.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 197.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 196.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 195.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 195.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 195.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 194.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 192.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 192.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 192.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 192.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 191.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 191.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 190.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 190.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 189.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 189.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 189.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 188.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 187.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 187.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 187.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 186.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 184.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 184.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 184.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 183.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 183.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 183.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 182.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 181.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 181.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 179.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 179.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 178.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 178.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 178.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 178.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 177.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 177.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 177.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 177.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 175.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 175.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 174.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 170.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 164.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 162.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 160.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 159.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 158.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 157.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 156.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 154.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 154.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 146.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 145.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 143.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 141.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 136.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 135.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 135.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 135.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 130.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 126.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 123.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 120.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 119.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 118.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 113.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 110.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 104.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 74.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 55.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 55.7
FF:10164-103B2 76 years, female 55.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 19.4
Pig sample Sample description nTPM
Caudate
nTPM: 19.4
Samples: 4

Max nTPM: 21.3
Min nTPM: 17.3
Sample A Female 17.9
Sample B Female 21.3
Sample C Male 21.0
Sample D Male 17.3

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