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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:909.7 nTPM
HPA:909.7 nTPM
GTEx:996.5 nTPM
FANTOM5:441.1 Scaled Tags Per Million
Pig:78.1 nTPM
Mouse:1134.5 nTPM
Allen mouse:6.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA003282Antibody CAB020828
Glial cells MediumMedium
Neuronal cells Not detectedLow

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 909.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 909.7
2288 Male, age 75, left hemisphere 1091.5
2481 Female, age 94, left hemisphere 1045.7
1857 Female, age 85, left hemisphere 959.6
2290 Female, age 72, unknown 899.7
1781 Male, age 74, unknown 852.8
1854 Male, age 80, left hemisphere 851.2
2289 Male, age 61, right hemisphere 814.5
2846 Female, age 79, unknown 762.6
Claustrum
nTPM: 758.0
2491 Male, age 75, both hemispheres 804.1
2568 Male, age 61, both hemispheres 794.4
2198 Male, age 80, both hemispheres 784.2
2645 Female, age 72, unknown 770.7
2284 Female, age 91, both hemispheres 769.1
2392 Female, age 94, both hemispheres 749.0
2196 Female, age 79, unknown 737.6
1956 Male, age 74, unknown 733.2
2292 Female, age 85, both hemispheres 679.6
Globus pallidus, externus
nTPM: 876.0
2646 Male, age 61, right hemisphere 1015.0
1996 Male, age 80, right hemisphere 928.1
2772 Female, age 79, unknown 898.6
2395 Male, age 75, both hemispheres 782.7
2567 Female, age 72, unknown 755.6
Globus pallidus, internus
nTPM: 872.5
2483 Female, age 94, right hemisphere 1059.7
1818 Male, age 74, unknown 938.4
2037 Male, age 80, right hemisphere 904.1
2287 Male, age 75, right hemisphere 878.7
2778 Female, age 91, both hemispheres 853.7
2566 Female, age 72, unknown 745.0
2111 Female, age 85, right hemisphere 728.2
Nucleus accumbens
nTPM: 866.3
2286 Male, age 75, left hemisphere 1154.9
1806 Female, age 85, left hemisphere 909.0
1856 Female, age 91, right hemisphere 871.1
2391 Female, age 94, left hemisphere 846.0
2824 Male, age 61, right hemisphere 827.5
1783 Male, age 74, unknown 798.6
2698 Female, age 72, unknown 797.3
2732 Male, age 80, right hemisphere 726.0
Nucleus basalis of Meynert
nTPM: 865.8
2569 Male, age 61, both hemispheres 1069.8
2484 Female, age 94, left hemisphere 860.5
2393 Male, age 80, right hemisphere 768.1
2821 Male, age 75, both hemispheres 764.8
Nucleus of the diagonal band
nTPM: 842.5
1812 Female, age 91, both hemispheres 885.7
2775 Male, age 80, right hemisphere 865.0
2195 Female, age 85, both hemispheres 864.8
2029 Male, age 61, right hemisphere 836.6
1979 Male, age 74, unknown 760.6
Olfactory tubercle
nTPM: 868.9
2856 Male, age 75, right hemisphere 938.1
1846 Male, age 80, right hemisphere 868.1
1998 Female, age 91, both hemispheres 844.7
2487 Female, age 94, left hemisphere 824.7
Putamen
nTPM: 822.9
2482 Female, age 94, left hemisphere 933.5
2647 Male, age 75, left hemisphere 873.5
1937 Female, age 91, right hemisphere 854.8
1838 Male, age 80, right hemisphere 793.7
2489 Female, age 72, unknown 771.1
2466 Female, age 79, unknown 768.7
1829 Male, age 74, unknown 765.1
Septal nuclei
nTPM: 837.4
2059 Female, age 85, both hemispheres 953.2
2031 Female, age 72, unknown 875.2
1960 Male, age 74, unknown 859.8
2009 Female, age 91, both hemispheres 826.4
2629 Female, age 94, right hemisphere 808.9
2394 Male, age 61, left hemisphere 795.8
2199 Male, age 80, right hemisphere 742.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 996.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 943.7
Samples: 246

Max nTPM: 2802.5
Min nTPM: 137.8
Std nTPM: 407.0
Median nTPM: 860.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 2802.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 2516.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 2231.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 2231.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 1984.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1981.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1891.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 1810.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1756.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1740.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1735.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1678.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1672.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1671.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1650.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 1645.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1602.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1599.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 1557.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1548.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1526.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1521.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1520.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1494.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1473.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1467.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1453.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1425.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1407.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1403.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 1392.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1375.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1361.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1356.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1354.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 1342.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 1332.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 1329.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 1315.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 1304.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1302.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 1290.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1266.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 1265.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1262.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1258.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1254.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 1253.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 1242.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 1238.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 1233.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 1224.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 1223.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1215.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 1207.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1196.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1191.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 1189.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1168.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1168.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1163.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 1160.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 1158.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1153.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 1151.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 1147.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1147.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 1143.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 1127.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1121.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 1121.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 1118.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 1109.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 1106.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1105.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1104.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 1093.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1091.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 1068.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1066.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 1060.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1059.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1057.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 1053.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 1040.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1040.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1034.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 1033.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1026.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1024.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1018.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 1014.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 999.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 997.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 996.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 987.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 987.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 981.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 963.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 962.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 955.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 954.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 953.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 953.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 930.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 926.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 922.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 921.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 920.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 918.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 915.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 914.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 908.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 906.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 899.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 886.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 884.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 878.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 878.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 871.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 870.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 864.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 864.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 857.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 857.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 856.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 852.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 851.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 842.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 842.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 835.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 831.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 831.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 829.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 825.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 819.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 818.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 817.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 813.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 809.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 808.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 805.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 802.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 797.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 788.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 781.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 779.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 768.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 764.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 762.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 761.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 760.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 757.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 755.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 754.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 753.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 744.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 742.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 740.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 739.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 737.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 735.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 732.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 732.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 728.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 721.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 720.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 719.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 719.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 714.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 711.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 711.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 710.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 708.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 704.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 699.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 699.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 698.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 697.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 695.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 687.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 681.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 680.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 672.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 668.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 665.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 663.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 655.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 654.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 648.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 638.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 621.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 620.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 619.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 615.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 609.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 607.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 604.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 602.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 596.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 593.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 587.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 586.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 584.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 578.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 577.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 573.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 571.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 569.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 560.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 558.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 555.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 551.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 550.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 549.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 547.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 547.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 545.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 544.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 536.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 535.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 534.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 529.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 529.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 525.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 504.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 494.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 482.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 459.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 448.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 440.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 429.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 426.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 424.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 411.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 375.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 374.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 372.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 348.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 327.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 311.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 271.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 256.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 239.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 200.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 137.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 889.7
Samples: 246

Max nTPM: 3840.0
Min nTPM: 61.1
Std nTPM: 460.0
Median nTPM: 787.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 3840.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 2375.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 2241.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 2172.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 2143.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 2112.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 2060.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 1990.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 1932.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 1931.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 1906.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 1884.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 1865.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 1722.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 1703.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 1671.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 1668.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 1667.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 1625.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1623.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 1617.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 1616.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 1613.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 1590.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 1577.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 1575.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 1557.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 1550.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1544.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 1489.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 1484.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 1456.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 1415.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 1409.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 1358.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 1299.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 1293.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 1289.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 1265.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 1261.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 1247.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 1238.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 1230.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 1211.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 1199.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 1195.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 1178.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 1145.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 1139.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 1138.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 1122.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 1122.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 1111.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 1107.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 1107.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 1073.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 1072.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 1044.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 1033.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 1032.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 1027.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 1020.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 1010.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 1002.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 986.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 976.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 971.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 971.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 968.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 967.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 963.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 952.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 947.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 940.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 935.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 933.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 929.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 929.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 922.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 920.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 914.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 914.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 912.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 910.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 910.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 907.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 894.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 890.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 875.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 875.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 874.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 873.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 873.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 865.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 864.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 861.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 859.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 859.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 854.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 853.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 850.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 847.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 845.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 845.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 841.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 841.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 839.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 831.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 831.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 827.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 826.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 825.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 824.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 823.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 823.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 814.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 814.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 809.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 805.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 798.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 798.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 789.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 788.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 786.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 783.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 782.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 770.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 750.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 745.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 735.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 735.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 733.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 732.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 730.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 727.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 726.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 723.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 719.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 715.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 715.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 715.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 713.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 712.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 699.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 698.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 693.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 688.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 687.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 687.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 687.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 687.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 687.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 684.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 680.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 676.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 676.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 675.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 675.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 672.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 671.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 671.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 668.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 661.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 659.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 643.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 640.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 637.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 635.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 634.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 634.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 630.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 629.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 626.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 619.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 618.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 616.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 614.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 607.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 606.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 598.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 598.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 597.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 595.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 593.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 591.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 590.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 584.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 583.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 582.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 580.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 573.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 572.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 570.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 569.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 565.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 563.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 562.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 555.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 538.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 536.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 533.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 532.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 530.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 529.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 529.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 517.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 514.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 512.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 511.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 511.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 511.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 504.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 502.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 501.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 501.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 491.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 488.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 482.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 482.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 478.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 476.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 473.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 467.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 465.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 460.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 453.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 453.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 451.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 441.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 437.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 432.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 427.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 424.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 424.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 423.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 418.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 401.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 400.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 380.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 357.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 340.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 326.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 286.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 270.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 171.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 61.1
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Brain - Putamen (basal ganglia)
Average nTPM: 996.5
Samples: 205

Max nTPM: 2594.6
Min nTPM: 287.4
Std nTPM: 453.9
Median nTPM: 906.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 2594.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 2540.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 2522.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 2251.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 2245.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 2219.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 2148.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 2088.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 2035.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1830.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 1812.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1807.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 1720.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1702.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1681.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1665.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1643.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 1637.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 1625.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1620.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1560.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1548.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1547.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1532.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 1515.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 1509.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1501.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1494.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1481.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1472.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1451.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 1445.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 1433.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 1427.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1420.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 1394.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 1375.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1372.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 1363.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 1347.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 1342.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 1333.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 1316.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1304.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 1302.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 1292.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1275.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1262.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1246.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1244.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1238.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 1235.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 1232.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1228.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1220.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 1212.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1204.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 1202.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 1194.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 1193.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 1187.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 1185.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 1167.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1166.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 1162.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 1157.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 1145.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 1137.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 1136.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 1127.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 1090.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 1089.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 1089.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 1088.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 1075.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 1061.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 1044.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 1043.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 1041.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 1034.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 1032.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 1018.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 1012.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1011.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 999.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 997.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 992.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 988.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 987.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 984.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 979.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 979.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 974.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 957.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 944.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 938.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 934.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 931.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 930.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 930.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 929.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 925.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 906.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 891.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 880.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 880.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 876.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 871.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 864.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 863.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 863.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 858.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 855.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 855.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 854.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 840.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 835.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 828.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 825.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 825.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 824.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 823.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 822.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 820.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 818.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 802.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 797.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 792.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 781.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 779.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 776.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 768.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 767.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 751.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 748.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 747.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 746.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 743.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 740.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 738.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 737.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 736.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 730.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 726.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 723.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 720.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 717.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 707.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 697.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 696.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 693.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 665.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 664.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 655.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 654.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 650.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 645.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 642.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 632.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 625.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 624.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 622.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 622.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 615.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 615.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 613.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 606.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 599.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 591.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 585.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 581.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 578.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 573.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 568.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 563.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 558.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 537.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 534.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 526.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 520.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 513.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 512.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 506.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 505.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 493.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 486.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 480.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 480.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 476.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 472.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 463.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 458.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 441.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 425.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 399.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 398.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 390.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 369.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 366.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 364.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 354.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 324.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 312.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 289.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 287.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 441.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 441.1
FF:10164-103B2 76 years, female 441.1
Globus pallidus
Scaled Tags Per Million: 285.8
FF:10175-103C4 60 years, female 376.5
FF:10161-103A8 76 years, female 195.1
Nucleus accumbens
Scaled Tags Per Million: 396.5
FF:10037-101F1 23-56 years, mixed 396.5
Putamen
Scaled Tags Per Million: 438.1
FF:10176-103C5 60 years, female 438.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 78.1
Pig sample Sample description nTPM
Caudate
nTPM: 64.0
Samples: 4

Max nTPM: 83.3
Min nTPM: 46.3
Sample A Female 46.7
Sample B Female 79.6
Sample C Male 83.3
Sample D Male 46.3
Putamen
nTPM: 67.9
Samples: 4

Max nTPM: 96.3
Min nTPM: 50.8
Sample A Female 70.5
Sample B Female 50.8
Sample C Male 96.3
Sample D Male 54.0
Septum
nTPM: 78.1
Samples: 4

Max nTPM: 106.8
Min nTPM: 63.6
Sample A Female 66.5
Sample B Female 75.5
Sample C Male 106.8
Sample D Male 63.6
Ventral pallidum
nTPM: 76.8
Samples: 4

Max nTPM: 122.4
Min nTPM: 38.3
Sample A Female 49.5
Sample B Female 96.9
Sample C Male 122.4
Sample D Male 38.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 1134.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 1119.2
Samples: 4

Max nTPM: 1251.9
Min nTPM: 1017.1
Sample A Male 1017.1
Sample B Male 1123.5
Sample C Female 1084.2
Sample D Female 1251.9
Septum
nTPM: 1134.5
Samples: 4

Max nTPM: 1317.5
Min nTPM: 893.8
Sample A Male 893.8
Sample B Male 1317.5
Sample C Female 1227.3
Sample D Female 1099.4
Ventral forebrain
nTPM: 1070.4
Samples: 4

Max nTPM: 1295.4
Min nTPM: 942.6
Sample A Male 942.6
Sample B Male 999.9
Sample C Female 1295.4
Sample D Female 1043.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 6.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.2
275696 Antisense, RP_040617_01_C08, Mouse strain C57BL/6J (56 days, male) 7.5
79556636 Antisense, RP_071204_01_A02, Mouse strain C57BL/6J (56 days, male) 7.1
73512352 Antisense, RP_050719_02_A05, Mouse strain C57BL/6J (56 days, male) 1.0
71022960 Antisense, RP_050719_02_A05, Mouse strain C57BL/6J (56 days, male) 0.5
Pallidum
Expression energy: 6.5
275696 Antisense, RP_040617_01_C08, Mouse strain C57BL/6J (56 days, male) 9.5
79556636 Antisense, RP_071204_01_A02, Mouse strain C57BL/6J (56 days, male) 8.6
73512352 Antisense, RP_050719_02_A05, Mouse strain C57BL/6J (56 days, male) 1.4
71022960 Antisense, RP_050719_02_A05, Mouse strain C57BL/6J (56 days, male) 1.2

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