HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:481.0 nTPM
HPA:481.0 nTPM
GTEx:493.0 nTPM
FANTOM5:42.6 Scaled Tags Per Million
Pig:331.1 nTPM
Mouse:938.0 nTPM
Allen mouse:22.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050924Antibody HPA053568
Glial cells LowNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 481.0
Sample id Sample description nTPM
Hippocampus
nTPM: 451.6
1898 Male, age 80, left hemisphere 515.4
2621 Female, age 67, right hemisphere 454.0
2148 Female, age 91, left hemisphere 449.3
1855 Male, age 76, left hemisphere 446.2
2529 Female, age 94, left hemisphere 437.4
1911 Female, age 85, right hemisphere 407.5
Dentate gyrus
nTPM: 449.9
2010 Male, age 76, both hemispheres 485.2
2530 Female, age 94, left hemisphere 468.3
1927 Female, age 91, both hemispheres 458.5
2528 Male, age 74, both hemispheres 436.8
2246 Female, age 85, both hemispheres 432.7
2531 Female, age 67, both hemispheres 418.2
Entorhinal gyrus
nTPM: 437.7
2764 Male, age 80, right hemisphere 476.7
1938 Female, age 85, left hemisphere 445.7
1787 Male, age 76, left hemisphere 429.7
2613 Female, age 94, left hemisphere 428.8
2686 Male, age 75, right hemisphere 427.7
2117 Female, age 91, right hemisphere 417.3
Hippocampus, CA1
nTPM: 481.0
2749 Male, age 80, left hemisphere 568.8
2527 Male, age 74, both hemispheres 476.6
2045 Male, age 76, both hemispheres 461.8
1873 Female, age 85, both hemispheres 460.6
2082 Female, age 91, right hemisphere 437.0
Hippocampus, CA2
nTPM: 453.3
1963 Male, age 80, left hemisphere 486.5
1892 Male, age 76, both hemispheres 484.7
2249 Male, age 74, both hemispheres 462.3
2437 Female, age 94, left hemisphere 436.0
2113 Female, age 91, right hemisphere 428.6
1940 Female, age 85, left hemisphere 421.6
Hippocampus, CA3
nTPM: 449.4
2137 Male, age 80, left hemisphere 475.1
2436 Male, age 74, both hemispheres 459.8
1867 Male, age 76, both hemispheres 459.0
2861 Female, age 67, both hemispheres 444.4
2620 Female, age 94, left hemisphere 435.0
1891 Female, age 85, both hemispheres 422.8
Parahippocampal cortex
nTPM: 449.6
2250 Female, age 67, right hemisphere 478.3
1850 Male, age 80, both hemispheres 476.3
2245 Female, age 91, both hemispheres 469.7
2018 Male, age 76, both hemispheres 461.6
1933 Female, age 85, both hemispheres 457.5
1990 Female, age 91, right hemisphere 447.9
2532 Female, age 72, left hemisphere 447.8
2693 Female, age 94, both hemispheres 429.5
2692 Male, age 74, both hemispheres 417.2
2622 Female, age 67, right hemisphere 410.0
Perirhinal gyrus
nTPM: 478.7
1847 Female, age 91, left hemisphere 514.1
1794 Male, age 80, right hemisphere 491.5
1841 Female, age 85, right hemisphere 479.5
2521 Female, age 94, right hemisphere 471.0
2848 Male, age 76, right hemisphere 437.2
Subiculum
nTPM: 427.0
1977 Female, age 85, both hemispheres 453.6
1901 Male, age 80, both hemispheres 445.1
2619 Male, age 74, both hemispheres 431.5
2042 Male, age 76, both hemispheres 416.7
2729 Female, age 91, right hemisphere 413.1
2438 Female, age 94, left hemisphere 402.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 493.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 493.0
Samples: 197

Max nTPM: 1011.3
Min nTPM: 203.7
Std nTPM: 169.3
Median nTPM: 464.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 1011.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 949.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 894.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 868.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 859.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 843.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 841.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 824.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 820.5
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 812.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 808.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.6
FF:10169-103B7 60 years, female 57.5
FF:10153-102I9 76 years, female 27.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 331.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 331.1
Samples: 4

Max nTPM: 422.5
Min nTPM: 244.0
Sample A Female 422.5
Sample B Female 322.3
Sample C Male 335.4
Sample D Male 244.0
Entorhinal cortex
nTPM: 303.3
Samples: 4

Max nTPM: 316.6
Min nTPM: 272.6
Sample A Female 313.0
Sample B Female 316.6
Sample C Male 311.0
Sample D Male 272.6
Subiculum
nTPM: 295.3
Samples: 4

Max nTPM: 344.2
Min nTPM: 259.4
Sample A Female 344.2
Sample B Female 259.4
Sample C Male 283.6
Sample D Male 293.8
Ventral hippocampus
nTPM: 322.6
Samples: 4

Max nTPM: 402.6
Min nTPM: 211.5
Sample A Female 332.2
Sample B Female 211.5
Sample C Male 402.6
Sample D Male 343.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 938.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 938.0
Samples: 4

Max nTPM: 1063.0
Min nTPM: 833.1
Sample A Male 833.1
Sample B Male 904.8
Sample C Female 951.2
Sample D Female 1063.0
Hippocampal formation
nTPM: 908.2
Samples: 4

Max nTPM: 935.1
Min nTPM: 853.6
Sample A Male 935.1
Sample B Male 853.6
Sample C Female 933.2
Sample D Female 910.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 22.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 22.4
70191997 Antisense, RP_050517_01_A08, Mouse strain C57BL/6J (56 days, male) 22.4

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