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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 1606.3
Min nTPM: 153.5
Std nTPM: 269.6
Median nTPM: 0.0
218_1
71 years, female
1606.3
386_1
76 years, male
1348.6
379_1
60 years, male
1287.9
173_1
67 years, male
1180.3
237_1
82 years, male
1180.2
6_1
73 years, female
1173.3
375_1
74 years, female
1170.2
447_1
81 years, male
1120.7
322_1
76 years, male
1087.7
384_1
83 years, male
1037.4
347_1
72 years, male
1019.5
307_1
66 years, female
999.6
316_1
62 years, male
966.0
145_1
84 years, male
910.4
120_1
70 years, female
908.3
35_1
74 years, female
879.9
319_1
81 years, male
879.3
452_1
88 years, female
878.8
350_1
84 years, female
873.7
17_1
71 years, male
847.1
4_1
88 years, female
841.5
295_1
61 years, female
824.0
321_1
62 years, female
818.6
354_1
81 years, female
807.7
351_1
91 years, male
770.4
42_1
85 years, male
765.9
506_1
65 years, male
762.5
117_1
61 years, male
738.1
353_1
82 years, female
711.4
317_1
60 years, male
711.2
2_1
77 years, female
707.1
348_1
84 years, male
699.8
318_1
68 years, male
689.8
291_1
76 years, male
687.3
243_1
75 years, male
687.0
377_1
82 years, female
679.2
308_1
70 years, female
671.4
389_1
86 years, female
660.8
320_1
89 years, female
660.1
518_1
75 years, female
649.8
137_1
83 years, male
643.7
99_1
64 years, male
643.0
396_1
62 years, male
633.0
41_1
94 years, female
628.2
119_1
70 years, female
606.1
311_1
78 years, male
595.7
163_1
78 years, male
583.3
139_1
64 years, female
581.7
355_1
70 years, female
580.5
335_1
73 years, female
573.7
495_1
57 years, female
572.2
18_1
88 years, male
568.9
288_1
66 years, female
568.1
376_1
75 years, female
560.1
349_1
83 years, male
558.2
425_1
59 years, female
547.8
264_1
73 years, female
544.5
315_1
62 years, female
535.7
126_1
63 years, male
535.0
405_1
91 years, male
527.9
313_1
79 years, female
523.7
172_1
72 years, female
520.2
177_1
74 years, male
518.9
265_1
87 years, male
515.3
314_1
67 years, male
515.1
115_1
83 years, male
510.9
404_1
82 years, female
499.4
526_1
61 years, male
497.6
189_1
76 years, male
495.8
480_1
63 years, male
491.4
153_1
70 years, female
491.3
293_1
68 years, female
486.1
142_1
61 years, female
482.9
43_1
64 years, female
482.0
394_1
75 years, female
479.3
356_1
87 years, female
475.5
406_1
79 years, male
468.4
324_1
76 years, male
459.6
292_1
71 years, male
451.1
352_1
62 years, male
438.3
503_1
68 years, male
430.1
109_1
81 years, female
427.2
162_1
79 years, female
422.2
254_1
77 years, female
415.8
246_1
77 years, male
411.3
517_1
88 years, male
410.6
251_1
78 years, male
392.5
81_1
67 years, male
383.5
468_1
89 years, male
377.9
286_1
68 years, female
372.3
490_1
67 years, female
363.6
501_1
88 years, male
349.2
499_1
55 years, female
341.1
9_1
66 years, female
339.6
217_1
76 years, male
338.3
491_1
89 years, female
318.3
229_1
69 years, female
317.8
89_1
63 years, male
317.5
266_1
85 years, male
298.6
32_1
67 years, male
254.7
466_1
57 years, female
232.4
415_1
77 years, female
229.6
149_1
88 years, male
222.5
414_1
84 years, female
219.8
413_1
59 years, female
153.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.