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RPS12
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  • RPS12
PATHOLOGY PROSTATE CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
ANTIBODIES
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VALIDATION
Dictionary
Prostate cancer
Human pathology
Prostate cancer
PROSTATE CANCER - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

Read more
RPS12 is not prognostic in prostate cancer


Stage:
Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

Read more
: 1365.34
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

Read more
: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average FPKM 1251.9
Number of samples 494
Samples
Sample Description FPKM
TCGA-M7-A722-01A 65 years, male, alive, 1060 days 5012.0
TCGA-J4-A67K-01A 68 years, male, alive, 1004 days 4834.1
TCGA-FC-A6HD-01A 77 years, male, alive, 789 days 4002.1
TCGA-EJ-7325-01B 63 years, male, alive, 1070 days 3971.5
TCGA-KK-A6E4-01A 69 years, male, dead, 3502 days 3916.4
TCGA-H9-A6BY-01A 63 years, male, alive, 112 days 3501.2
TCGA-KK-A7AW-01A 57 years, male, alive, 1054 days 3409.3
TCGA-J4-A67N-01A 61 years, male, alive, 937 days 3264.2
TCGA-EJ-A65D-01A 66 years, male, alive, 393 days 3136.2
TCGA-HC-A6AO-01A 52 years, male, alive, 530 days 2996.8
TCGA-EJ-A46F-01A 57 years, male, alive, 783 days 2989.7
TCGA-QU-A6IO-01A 53 years, male, alive, 3716 days 2832.1
TCGA-HC-A6AP-01A 61 years, male, alive, 71 days 2782.7
TCGA-XK-AAIW-01A 78 years, male, alive, 1218 days 2722.8
TCGA-HC-A6HX-01A 55 years, male, alive, 38 days 2697.6
TCGA-HC-A6AS-01A 70 years, male, alive, 44 days 2695.6
TCGA-J4-A67M-01A 55 years, male, alive, 941 days 2693.5
TCGA-HC-A6AL-01A 64 years, male, alive, 67 days 2677.9
TCGA-J4-A67O-01A 59 years, male, alive, 839 days 2642.9
TCGA-KK-A7B0-01A 67 years, male, alive, 1329 days 2620.2
TCGA-V1-A9ZR-01A 69 years, male, alive, 1361 days 2521.2
TCGA-J4-A67R-01A 65 years, male, alive, 910 days 2500.7
TCGA-HC-A6AQ-01A 60 years, male, alive, 106 days 2472.1
TCGA-ZG-A9LB-01A 72 years, male, alive, 583 days 2463.5
TCGA-V1-A9Z7-01A 55 years, male, alive, 874 days 2362.8
TCGA-VP-A87B-01A 63 years, male, alive, 2722 days 2322.6
TCGA-EJ-A7NM-01A 64 years, male, alive, 128 days 2300.8
TCGA-J4-A67Q-01A 77 years, male, alive, 975 days 2229.5
TCGA-HC-A8D0-01A 61 years, male, alive, 775 days 2211.6
TCGA-J9-A8CM-01A 66 years, male, alive, 463 days 2202.9
TCGA-YL-A9WI-01A 63 years, male, alive, 1623 days 2170.0
TCGA-G9-6347-01A 59 years, male, alive, 2089 days 2128.3
TCGA-HC-A4ZV-01A 56 years, male, alive, 23 days 2126.5
TCGA-QU-A6IL-01A 64 years, male, alive, 97 days 2087.1
TCGA-M7-A71Z-01A 62 years, male, alive, 643 days 2078.9
TCGA-CH-5768-01A 72 years, male, white, alive, 731 days 2078.2
TCGA-G9-6379-01A 68 years, male, alive, 1778 days 2073.1
TCGA-HC-A6AN-01A 67 years, male, alive, 49 days 2060.7
TCGA-XQ-A8TA-01A 59 years, male, dead, 146 days 2058.6
TCGA-J4-A67L-01A 54 years, male, alive, 770 days 2056.1
TCGA-TP-A8TV-01A 62 years, male, alive, 610 days 2052.5
TCGA-J4-A67S-01A 63 years, male, alive, 833 days 2028.3
TCGA-EJ-7321-01A 57 years, male, black or african american, alive, 824 days 2025.7
TCGA-ZG-A9LZ-01A 66 years, male, alive, 692 days 1976.1
TCGA-EJ-5525-01A 67 years, male, white, alive, 1115 days 1975.6
TCGA-KK-A7AY-01A 60 years, male, alive, 1754 days 1928.8
TCGA-YL-A8HM-01A 66 years, male, alive, 1482 days 1923.3
TCGA-V1-A9OA-01A 62 years, male, alive, 636 days 1905.2
TCGA-VP-A876-01A 46 years, male, alive, 3333 days 1902.4
TCGA-QU-A6IN-01A 61 years, male, alive, 4264 days 1902.2
TCGA-HC-A76W-01A 73 years, male, alive, 213 days 1897.0
TCGA-EJ-A65B-01A 55 years, male, alive, 710 days 1885.6
TCGA-KK-A8IB-01A 65 years, male, alive, 83 days 1883.1
TCGA-KK-A7B2-01A 68 years, male, alive, 1099 days 1867.1
TCGA-EJ-A65M-01A 65 years, male, alive, 230 days 1865.2
TCGA-XK-AAJ3-01A 56 years, male, alive, 1262 days 1864.3
TCGA-J4-8198-01A 49 years, male, alive, 614 days 1855.4
TCGA-YL-A8SO-01B 64 years, male, alive, 3479 days 1855.0
TCGA-HC-8213-01A 48 years, male, alive, 589 days 1838.4
TCGA-ZG-A9NI-01A 73 years, male, alive, 132 days 1821.9
TCGA-KK-A7AP-01A 55 years, male, alive, 196 days 1815.7
TCGA-HC-A6HY-01A 51 years, male, alive, 134 days 1807.4
TCGA-YL-A8SJ-01B 60 years, male, alive, 1395 days 1801.4
TCGA-ZG-A9L9-01A 60 years, male, alive, 617 days 1799.5
TCGA-HC-7744-01A 46 years, male, white, alive, 531 days 1789.5
TCGA-KK-A8I8-01A 69 years, male, alive, 967 days 1777.8
TCGA-HC-8257-01A 70 years, male, alive, 726 days 1758.1
TCGA-KK-A6E3-01A 56 years, male, alive, 2056 days 1754.5
TCGA-HC-A632-01A 68 years, male, alive, 61 days 1746.4
TCGA-KK-A5A1-01A 72 years, male, dead, 2469 days 1740.1
TCGA-FC-A66V-01A 74 years, male, alive, 524 days 1738.6
TCGA-YL-A8SI-01A 69 years, male, alive, 1614 days 1719.4
TCGA-KC-A7F3-01A 67 years, male, alive, 665 days 1712.5
TCGA-KK-A6E2-01A 54 years, male, alive, 5024 days 1700.4
TCGA-CH-5740-01A 57 years, male, white, alive, 31 days 1691.7
TCGA-EJ-A6RA-01A 70 years, male, alive, 353 days 1668.0
TCGA-XJ-A83F-01A male, alive, 1127 days 1655.9
TCGA-CH-5788-01A 69 years, male, white, alive, 821 days 1655.7
TCGA-ZG-A8QY-01A 67 years, male, alive, 404 days 1652.2
TCGA-XQ-A8TB-01A 67 years, male, alive, 770 days 1648.0
TCGA-HC-7747-01A 52 years, male, white, alive, 748 days 1639.9
TCGA-VP-A875-01A 67 years, male, alive, 2309 days 1635.3
TCGA-HC-8262-01A 57 years, male, alive, 679 days 1631.2
TCGA-M7-A71Y-01A 55 years, male, alive, 493 days 1622.2
TCGA-V1-A9OH-01A 64 years, male, alive, 2403 days 1618.2
TCGA-2A-A8W3-01A 70 years, male, alive, 863 days 1610.2
TCGA-EJ-7318-01B 51 years, male, alive, 1029 days 1596.6
TCGA-EJ-A65G-01A 57 years, male, alive, 666 days 1592.8
TCGA-EJ-7218-01B 71 years, male, alive, 2542 days 1590.3
TCGA-EJ-5509-01A 64 years, male, white, alive, 1464 days 1570.2
TCGA-YL-A8S9-01A 63 years, male, alive, 1842 days 1556.1
TCGA-M7-A724-01A 64 years, male, alive, 889 days 1541.8
TCGA-V1-A9OQ-01A 68 years, male, alive, 371 days 1539.5
TCGA-V1-A9ZI-01A 69 years, male, alive, 1640 days 1534.7
TCGA-YL-A8S8-01A 68 years, male, alive, 1890 days 1534.1
TCGA-HC-A76X-01A 62 years, male, alive, 150 days 1532.0
TCGA-J4-A6G1-01A 68 years, male, alive, 769 days 1531.0
TCGA-HC-7233-01A male, white, alive, 1355 days 1529.8
TCGA-J9-A8CK-01A 66 years, male, alive, 321 days 1526.1
TCGA-EJ-A6RC-01A 64 years, male, alive, 873 days 1518.6
TCGA-CH-5769-01A 48 years, male, white, alive, 62 days 1514.8
TCGA-VP-A87H-01A 76 years, male, alive, 663 days 1514.5
TCGA-KK-A7AV-01A 58 years, male, alive, 822 days 1507.6
TCGA-KK-A6E5-01A 63 years, male, alive, 2073 days 1497.1
TCGA-EJ-8474-01A 70 years, male, alive, 766 days 1493.7
TCGA-HI-7171-01A 56 years, male, white, dead, 1329 days 1491.2
TCGA-ZG-A8QZ-01A 65 years, male, alive, 308 days 1482.2
TCGA-2A-A8VO-01A 57 years, male, alive, 1701 days 1473.7
TCGA-XK-AAJP-01A 66 years, male, alive, 1259 days 1471.2
TCGA-QU-A6IM-01A 59 years, male, alive, 1247 days 1468.9
TCGA-M7-A723-01A 54 years, male, alive, 763 days 1468.9
TCGA-KK-A59Z-01A 66 years, male, alive, 2628 days 1465.9
TCGA-XK-AAK1-01A 62 years, male, alive, 979 days 1463.1
TCGA-V1-A8MF-01A 66 years, male, alive, 1449 days 1445.5
TCGA-VN-A88P-01A 60 years, male, alive, 1260 days 1444.9
TCGA-2A-AAYO-01A 58 years, male, alive, 1272 days 1438.8
TCGA-J4-A83N-01A 57 years, male, alive, 992 days 1431.8
TCGA-EJ-A7NF-01A 56 years, male, alive, 250 days 1429.8
TCGA-EJ-AB20-01A 61 years, male, alive, 131 days 1424.3
TCGA-V1-A9O9-01A 57 years, male, alive, 2870 days 1421.2
TCGA-CH-5764-01A 66 years, male, white, alive, 31 days 1420.4
TCGA-Y6-A8TL-01A 65 years, male, alive, 992 days 1418.1
TCGA-KK-A8IL-01A 65 years, male, dead, 628 days 1409.9
TCGA-EJ-7328-01A 70 years, male, white, alive, 842 days 1409.6
TCGA-KK-A8I4-01A 64 years, male, alive, 2259 days 1406.7
TCGA-KC-A7FE-01A 62 years, male, alive, 352 days 1406.3
TCGA-EJ-7784-01A 63 years, male, white, alive, 781 days 1396.9
TCGA-YL-A8SQ-01B 61 years, male, alive, 2083 days 1396.6
TCGA-YL-A8SP-01B 58 years, male, alive, 2366 days 1390.8
TCGA-HC-8256-01A 53 years, male, alive, 860 days 1383.9
TCGA-EJ-A8FS-01A 66 years, male, alive, 266 days 1380.4
TCGA-YL-A8HJ-01A 58 years, male, alive, 1611 days 1379.6
TCGA-J9-A52D-01A 71 years, male, alive, 212 days 1373.0
TCGA-EJ-7797-01A 53 years, male, white, alive, 983 days 1370.6
TCGA-V1-A9ZG-01A 65 years, male, alive, 1517 days 1367.4
TCGA-YL-A8SH-01B 69 years, male, dead, 875 days 1365.9
TCGA-V1-A9Z8-01A 60 years, male, alive, 827 days 1364.8
TCGA-G9-6365-01A 71 years, male, white, alive, 1363 days 1364.7
TCGA-V1-A8MG-01A 54 years, male, alive, 857 days 1364.6
TCGA-EJ-A8FN-01A 58 years, male, alive, 329 days 1351.8
TCGA-KK-A7AZ-01A 56 years, male, alive, 1519 days 1351.1
TCGA-J4-AATV-01A 71 years, male, alive, 553 days 1337.3
TCGA-ZG-A9MC-01A 69 years, male, alive, 455 days 1333.8
TCGA-KK-A8IF-01A 57 years, male, alive, 804 days 1333.3
TCGA-YL-A8SK-01B 67 years, male, alive, 1408 days 1325.7
TCGA-ZG-A9L2-01A 70 years, male, alive, 1154 days 1325.1
TCGA-J4-A83K-01A 52 years, male, alive, 328 days 1324.7
TCGA-HC-8216-01A 58 years, male, alive, 682 days 1324.5
TCGA-G9-6361-01A 61 years, male, white, alive, 1415 days 1324.1
TCGA-EJ-7115-01A 65 years, male, white, alive, 2687 days 1321.8
TCGA-XJ-A83G-01A male, alive, 1461 days 1321.1
TCGA-ZG-A9L0-01A 71 years, male, alive, 355 days 1319.9
TCGA-EJ-5499-01A 61 years, male, asian, alive, 1415 days 1318.8
TCGA-XA-A8JR-01A 68 years, male, alive, 376 days 1316.9
TCGA-G9-6377-01A 61 years, male, white, alive, 958 days 1314.5
TCGA-YL-A8SB-01A 62 years, male, alive, 1719 days 1311.5
TCGA-YL-A8HO-01A 67 years, male, alive, 2304 days 1306.5
TCGA-XK-AAIR-01A 75 years, male, alive, 972 days 1304.2
TCGA-CH-5751-01A 68 years, male, white, alive, 1065 days 1295.6
TCGA-J4-AAU2-01A 59 years, male, alive, 825 days 1295.0
TCGA-EJ-5496-01A 59 years, male, white, alive, 595 days 1290.8
TCGA-ZG-A9N3-01A 73 years, male, alive, 349 days 1288.7
TCGA-VN-A943-01A 71 years, male, alive, 496 days 1288.2
TCGA-V1-A8WS-01A 57 years, male, alive, 474 days 1287.8
TCGA-J9-A52C-01A 57 years, male, alive, 178 days 1287.5
TCGA-ZG-A9L4-01A 61 years, male, alive, 1108 days 1278.5
TCGA-V1-A9OY-01A 58 years, male, alive, 1067 days 1270.3
TCGA-M7-A720-01A 53 years, male, alive, 384 days 1269.4
TCGA-EJ-7314-01A 62 years, male, white, alive, 1150 days 1266.4
TCGA-G9-6363-01A 64 years, male, white, alive, 1378 days 1265.8
TCGA-XK-AAJR-01A 62 years, male, alive, 1124 days 1265.5
TCGA-HC-7231-01A 66 years, male, white, alive, 939 days 1263.0
TCGA-CH-5750-01A 72 years, male, white, alive, 396 days 1261.4
TCGA-CH-5767-01A 66 years, male, white, alive, 458 days 1260.3
TCGA-HC-8261-01A 48 years, male, alive, 546 days 1259.8
TCGA-XK-AAJU-01A 65 years, male, alive, 1576 days 1258.2
TCGA-HC-7750-01A 50 years, male, white, alive, 522 days 1257.7
TCGA-EJ-5512-01A 46 years, male, white, alive, 1733 days 1253.2
TCGA-XK-AAJT-01A 75 years, male, alive, 1434 days 1252.7
TCGA-EJ-A7NG-01A 64 years, male, alive, 432 days 1250.8
TCGA-ZG-A9LY-01A 60 years, male, alive, 370 days 1246.8
TCGA-EJ-5521-01A 63 years, male, white, alive, 2279 days 1242.0
TCGA-V1-A9O7-01A 61 years, male, alive, 2499 days 1239.1
TCGA-KK-A8I9-01A 61 years, male, alive, 1001 days 1237.1
TCGA-EJ-7123-01A 59 years, male, white, alive, 2572 days 1237.0
TCGA-EJ-A46D-01A 53 years, male, alive, 626 days 1234.9
TCGA-HC-A8D1-01A 68 years, male, alive, 573 days 1230.2
TCGA-KK-A7AQ-01A 62 years, male, alive, 1610 days 1230.2
TCGA-VN-A88K-01A 58 years, male, alive, 776 days 1229.5
TCGA-ZG-A9LS-01A 64 years, male, alive, 516 days 1225.6
TCGA-VP-A87C-01A 67 years, male, alive, 1690 days 1222.7
TCGA-2A-AAYF-01A 57 years, male, alive, 1364 days 1219.8
TCGA-CH-5743-01A 66 years, male, white, alive, 425 days 1213.2
TCGA-KK-A8IK-01A 56 years, male, alive, 2052 days 1211.3
TCGA-CH-5748-01A 64 years, male, white, alive, 31 days 1209.4
TCGA-VP-A87D-01A 54 years, male, alive, 1853 days 1208.2
TCGA-FC-A4JI-01A 71 years, male, alive, 877 days 1202.9
TCGA-HC-7075-01A male, white, alive, 601 days 1202.4
TCGA-EJ-8470-01A 58 years, male, alive, 1159 days 1202.4
TCGA-HC-8260-01A 43 years, male, alive, 686 days 1202.2
TCGA-KK-A8IA-01A 69 years, male, alive, 1931 days 1198.4
TCGA-HC-7212-01A 56 years, male, white, alive, 870 days 1197.8
TCGA-HC-7818-01A 66 years, male, white, alive, 938 days 1196.9
TCGA-QU-A6IP-01A 66 years, male, alive, 2620 days 1195.9
TCGA-VP-A878-01A 58 years, male, alive, 3130 days 1195.9
TCGA-KK-A8I7-01A 55 years, male, alive, 2002 days 1193.7
TCGA-EJ-7794-01A 67 years, male, white, alive, 1306 days 1193.6
TCGA-KC-A4BR-01A 76 years, male, alive, 1349 days 1192.7
TCGA-YL-A8SC-01A 66 years, male, alive, 1261 days 1192.2
TCGA-G9-7525-01A 64 years, male, alive, 994 days 1189.9
TCGA-KK-A7B4-01A 64 years, male, alive, 987 days 1187.7
TCGA-EJ-7793-01A 49 years, male, white, alive, 114 days 1186.1
TCGA-EJ-A65F-01A 59 years, male, alive, 560 days 1183.0
TCGA-G9-A9S7-01A 55 years, male, alive, 728 days 1183.0
TCGA-2A-A8VV-01A 52 years, male, alive, 671 days 1181.7
TCGA-KK-A8ID-01A 70 years, male, alive, 2107 days 1181.3
TCGA-HC-7738-01A 58 years, male, white, alive, 964 days 1180.9
TCGA-KK-A6E7-01A 46 years, male, alive, 2760 days 1179.0
TCGA-G9-6373-01A 68 years, male, white, alive, 811 days 1176.1
TCGA-J4-A83L-01A 61 years, male, alive, 720 days 1176.0
TCGA-CH-5752-01A 66 years, male, white, alive, 943 days 1174.2
TCGA-J4-A6M7-01A 53 years, male, alive, 512 days 1169.6
TCGA-CH-5746-01A 57 years, male, white, alive, 731 days 1164.1
TCGA-ZG-A9LN-01A 57 years, male, alive, 115 days 1162.5
TCGA-KK-A6E8-01A 68 years, male, alive, 1770 days 1161.2
TCGA-CH-5745-01A 68 years, male, white, alive, 91 days 1160.3
TCGA-J4-A83M-01A 64 years, male, alive, 543 days 1156.8
TCGA-G9-6332-01A 55 years, male, white, alive, 2657 days 1155.7
TCGA-CH-5792-01A 57 years, male, white, alive, 91 days 1153.5
TCGA-EJ-5504-01A 65 years, male, white, alive, 1427 days 1153.3
TCGA-HC-A631-01A 67 years, male, alive, 54 days 1153.3
TCGA-J4-A67T-01A 63 years, male, alive, 183 days 1147.8
TCGA-G9-6371-01A 58 years, male, white, alive, 1226 days 1147.2
TCGA-HC-7745-01A 65 years, male, white, alive, 721 days 1141.4
TCGA-HC-8259-01A 50 years, male, alive, 924 days 1138.6
TCGA-EJ-A7NK-01A 58 years, male, alive, 476 days 1138.0
TCGA-V1-A8X3-01A 52 years, male, alive, 202 days 1135.8
TCGA-V1-A9ZK-01A 69 years, male, alive, 1383 days 1135.7
TCGA-VN-A88L-01A 54 years, male, alive, 746 days 1133.4
TCGA-G9-7510-01A 66 years, male, alive, 1185 days 1132.8
TCGA-HC-7230-01A 50 years, male, white, alive, 1001 days 1128.5
TCGA-VN-A88Q-01A 60 years, male, alive, 1366 days 1127.2
TCGA-KC-A7FD-01A 62 years, male, alive, 270 days 1126.0
TCGA-G9-6348-01A 68 years, male, white, alive, 1515 days 1125.9
TCGA-VN-A88M-01A 55 years, male, alive, 189 days 1124.5
TCGA-V1-A8WV-01A 53 years, male, alive, 686 days 1123.4
TCGA-XJ-A9DK-01A male, alive, 275 days 1119.3
TCGA-G9-6329-01A 67 years, male, white, alive, 1266 days 1117.7
TCGA-VP-A87E-01A 59 years, male, alive, 2037 days 1113.5
TCGA-KK-A59V-01A 64 years, male, alive, 3440 days 1112.8
TCGA-EJ-5508-01A 65 years, male, white, alive, 1965 days 1109.9
TCGA-EJ-8469-01A 46 years, male, alive, 2324 days 1109.0
TCGA-KC-A7F6-01A 64 years, male, alive, 263 days 1107.8
TCGA-G9-6385-01A 66 years, male, white, alive, 830 days 1104.9
TCGA-HC-8266-01A 55 years, male, alive, 473 days 1104.6
TCGA-V1-A9OF-01A 50 years, male, alive, 1184 days 1104.2
TCGA-HC-8258-01A 56 years, male, alive, 847 days 1104.1
TCGA-FC-A5OB-01A 53 years, male, alive, 680 days 1101.7
TCGA-KK-A6E6-01A 69 years, male, alive, 3447 days 1101.5
TCGA-CH-5771-01A 63 years, male, white, alive, 396 days 1096.8
TCGA-ZG-A8QW-01A 72 years, male, alive, 94 days 1095.9
TCGA-J9-A8CN-01A 53 years, male, alive, 1237 days 1093.3
TCGA-CH-5772-01A 63 years, male, white, alive, 486 days 1092.6
TCGA-EJ-A7NN-01A 61 years, male, alive, 197 days 1092.0
TCGA-EJ-7317-01A 71 years, male, white, alive, 771 days 1091.2
TCGA-CH-5738-01A 72 years, male, white, alive, 212 days 1090.3
TCGA-HC-7079-01A 51 years, male, white, alive, 1184 days 1089.8
TCGA-YL-A9WX-01A 68 years, male, alive, 1518 days 1089.5
TCGA-EJ-5495-01A 68 years, male, white, alive, 1760 days 1089.3
TCGA-EJ-7788-01A 53 years, male, white, alive, 859 days 1088.0
TCGA-CH-5791-01A 72 years, male, white, alive, 1004 days 1084.1
TCGA-ZG-A9LM-01A 72 years, male, alive, 378 days 1083.3
TCGA-G9-6370-01A 52 years, male, white, alive, 1156 days 1081.5
TCGA-KK-A8IM-01A 55 years, male, alive, 1915 days 1080.7
TCGA-VN-A88O-01A 49 years, male, alive, 481 days 1080.3
TCGA-MG-AAMC-01A 59 years, male, alive, 173 days 1079.9
TCGA-EJ-7312-01B 58 years, male, alive, 1099 days 1077.9
TCGA-G9-6499-01A 66 years, male, white, alive, 1543 days 1075.4
TCGA-J4-8200-01A 47 years, male, alive, 1218 days 1074.9
TCGA-VP-A87K-01A 63 years, male, alive, 1306 days 1073.5
TCGA-KC-A4BL-01A 65 years, male, alive, 934 days 1071.6
TCGA-HC-7820-01A 72 years, male, white, alive, 747 days 1069.1
TCGA-G9-6356-01A 60 years, male, white, alive, 1434 days 1068.0
TCGA-EJ-5501-01A 55 years, male, white, alive, 1365 days 1064.2
TCGA-V1-A8MM-01A 61 years, male, alive, 1195 days 1063.1
TCGA-ZG-A9L5-01A 58 years, male, alive, 908 days 1062.9
TCGA-CH-5739-01A 65 years, male, white, alive, 671 days 1062.5
TCGA-M7-A721-01A 70 years, male, alive, 400 days 1061.7
TCGA-EJ-A8FU-01A 64 years, male, alive, 138 days 1057.2
TCGA-EJ-AB27-01A 51 years, male, alive, 145 days 1056.4
TCGA-HC-7749-01A 70 years, male, white, alive, 724 days 1055.9
TCGA-G9-6336-01A 57 years, male, white, alive, 2068 days 1051.7
TCGA-VP-A879-01A 70 years, male, dead, 728 days 1051.3
TCGA-HC-7078-01A 69 years, male, white, alive, 1985 days 1051.2
TCGA-J9-A52E-01A 65 years, male, alive, 323 days 1050.6
TCGA-EJ-5494-01A 50 years, male, white, alive, 1477 days 1050.3
TCGA-EJ-5514-01A 66 years, male, white, alive, 1829 days 1044.4
TCGA-V1-A9Z9-01A 64 years, male, alive, 540 days 1041.3
TCGA-CH-5794-01A 65 years, male, white, alive, 882 days 1040.7
TCGA-EJ-7789-01A 66 years, male, black or african american, alive, 1105 days 1039.9
TCGA-EJ-5531-01A 62 years, male, white, alive, 1273 days 1037.5
TCGA-J9-A8CL-01A 66 years, male, alive, 405 days 1035.3
TCGA-H9-7775-01A 68 years, male, white, alive, 185 days 1034.3
TCGA-KK-A6DY-01A 50 years, male, alive, 4295 days 1032.8
TCGA-HC-7817-01B 52 years, male, alive, 928 days 1032.6
TCGA-XJ-A9DI-01A male, alive, 1461 days 1031.4
TCGA-ZG-A9L1-01A 66 years, male, alive, 1302 days 1029.8
TCGA-H9-A6BX-01A 60 years, male, alive, 941 days 1026.9
TCGA-EJ-5530-01A 61 years, male, white, alive, 1832 days 1025.6
TCGA-EJ-A46E-01A 57 years, male, alive, 524 days 1024.2
TCGA-J9-A52B-01A 62 years, male, alive, 422 days 1022.9
TCGA-VN-A88R-01A 53 years, male, alive, 784 days 1022.5
TCGA-HC-7819-01A 53 years, male, white, alive, 543 days 1021.6
TCGA-J4-A6G3-01A 57 years, male, alive, 849 days 1019.7
TCGA-EJ-A8FP-01A 59 years, male, alive, 299 days 1019.6
TCGA-CH-5765-01A 55 years, male, white, alive, 700 days 1017.2
TCGA-EJ-A7NH-01A 56 years, male, alive, 474 days 1013.1
TCGA-KK-A8IH-01A 50 years, male, alive, 2013 days 1012.2
TCGA-CH-5762-01A 60 years, male, white, alive, 1339 days 1008.4
TCGA-KK-A7B3-01A 62 years, male, alive, 899 days 1008.2
TCGA-VN-A88I-01A 59 years, male, alive, 269 days 1008.2
TCGA-J9-A8CP-01A 66 years, male, alive, 386 days 1006.4
TCGA-V1-A8WL-01A 65 years, male, alive, 1948 days 1004.9
TCGA-YJ-A8SW-01A male, alive, 148 days 1004.5
TCGA-2A-A8VX-01A 70 years, male, alive, 1378 days 998.9
TCGA-KK-A8I5-01A 55 years, male, alive, 3096 days 997.2
TCGA-TP-A8TT-01A 64 years, male, alive, 526 days 997.1
TCGA-ZG-A9L6-01A 64 years, male, alive, 687 days 996.5
TCGA-EJ-5498-01A 56 years, male, white, alive, 1720 days 995.9
TCGA-SU-A7E7-01A 60 years, male, alive, 551 days 993.8
TCGA-EJ-7315-01A 68 years, male, white, alive, 1008 days 992.8
TCGA-V1-A9OX-01A 57 years, male, alive, 1134 days 991.3
TCGA-YL-A9WY-01A 57 years, male, alive, 1098 days 990.8
TCGA-EJ-A46I-01A 57 years, male, alive, 668 days 988.7
TCGA-KC-A7FA-01A 63 years, male, alive, 598 days 988.2
TCGA-YL-A8SL-01B 74 years, male, alive, 987 days 986.5
TCGA-G9-7519-01A 58 years, male, alive, 849 days 982.7
TCGA-YL-A8SR-01B 64 years, male, alive, 273 days 981.1
TCGA-EJ-7783-01A 70 years, male, white, alive, 787 days 977.8
TCGA-V1-A8MU-01A 57 years, male, alive, 1876 days 973.5
TCGA-2A-AAYU-01A 56 years, male, alive, 615 days 972.4
TCGA-G9-6343-01A 62 years, male, white, alive, 2450 days 969.4
TCGA-EJ-5527-01A 69 years, male, white, alive, 1778 days 968.5
TCGA-G9-6384-01A 53 years, male, white, alive, 765 days 967.9
TCGA-2A-A8W1-01A 54 years, male, alive, 112 days 962.7
TCGA-EJ-7786-01A 62 years, male, white, alive, 1096 days 959.6
TCGA-G9-6339-01A 58 years, male, alive, 2551 days 952.2
TCGA-ZG-A8QX-01A 56 years, male, alive, 442 days 951.6
TCGA-HC-7736-01A 59 years, male, white, alive, 1103 days 949.0
TCGA-FC-A8O0-01A 68 years, male, alive, 616 days 942.6
TCGA-KC-A7F5-01A 54 years, male, alive, 91 days 941.7
TCGA-Y6-A9XI-01A 72 years, male, alive, 526 days 938.0
TCGA-V1-A8MK-01A 42 years, male, alive, 508 days 937.5
TCGA-HC-A8CY-01A 63 years, male, alive, 290 days 934.6
TCGA-J4-A83I-01A 63 years, male, alive, 685 days 934.1
TCGA-EJ-5503-01A 50 years, male, white, alive, 1391 days 930.8
TCGA-XJ-A9DQ-01A male, alive, 91 days 928.5
TCGA-CH-5790-01A 64 years, male, white, alive, 974 days 928.0
TCGA-EJ-5510-01A 49 years, male, white, alive, 1887 days 925.9
TCGA-V1-A9OL-01A 66 years, male, alive, 1913 days 925.4
TCGA-KK-A8IG-01A 55 years, male, alive, 2505 days 924.5
TCGA-CH-5741-01A 56 years, male, white, alive, 395 days 923.4
TCGA-EJ-5505-01A 57 years, male, white, alive, 922 days 921.2
TCGA-EJ-A8FO-01A 51 years, male, alive, 282 days 918.7
TCGA-YL-A9WL-01A 59 years, male, alive, 740 days 918.1
TCGA-G9-6378-01A 54 years, male, black or african american, alive, 1155 days 917.9
TCGA-YL-A8SA-01A 69 years, male, alive, 512 days 916.1
TCGA-KK-A8I6-01A 58 years, male, alive, 668 days 915.0
TCGA-EJ-A46B-01A 66 years, male, alive, 657 days 911.9
TCGA-G9-A9S4-01A 62 years, male, alive, 906 days 908.3
TCGA-YL-A9WH-01A 67 years, male, alive, 427 days 908.0
TCGA-YL-A9WJ-01A 47 years, male, dead, 1855 days 905.2
TCGA-ZG-A9LU-01A 67 years, male, alive, 579 days 904.2
TCGA-M7-A725-01A 56 years, male, alive, 573 days 903.9
TCGA-KK-A7AU-01A 63 years, male, alive, 1775 days 902.9
TCGA-CH-5754-01A 65 years, male, white, alive, 62 days 901.6
TCGA-EJ-5526-01A 56 years, male, white, alive, 1909 days 901.0
TCGA-EJ-5502-01A 50 years, male, alive, 1171 days 900.6
TCGA-KK-A8IJ-01A 59 years, male, alive, 1559 days 897.9
TCGA-HC-8264-01B 60 years, male, alive, 48 days 897.6
TCGA-EJ-7125-01A 45 years, male, white, alive, 2850 days 895.8
TCGA-KC-A4BV-01A 66 years, male, alive, 1328 days 895.5
TCGA-HC-A9TH-01A 58 years, male, alive, 844 days 892.3
TCGA-G9-7523-01A 44 years, male, alive, 857 days 891.3
TCGA-V1-A8WN-01A 48 years, male, alive, 924 days 890.5
TCGA-EJ-5517-01A 55 years, male, white, alive, 1889 days 888.5
TCGA-G9-6354-01A 55 years, male, alive, 2066 days 882.7
TCGA-4L-AA1F-01A 64 years, male, alive, 350 days 882.2
TCGA-EJ-7327-01A 61 years, male, white, alive, 923 days 867.6
TCGA-HC-A48F-01A 47 years, male, alive, 680 days 865.2
TCGA-CH-5763-01A 66 years, male, white, alive, 365 days 863.5
TCGA-KK-A6E0-01A 59 years, male, alive, 1483 days 860.3
TCGA-KK-A8IC-01A 54 years, male, alive, 2051 days 858.9
TCGA-EJ-7781-01A 65 years, male, white, alive, 1073 days 856.9
TCGA-EJ-5532-01A 57 years, male, white, alive, 1828 days 856.6
TCGA-G9-6353-01A 58 years, male, white, alive, 1542 days 855.7
TCGA-CH-5766-01A 55 years, male, white, alive, 31 days 855.0
TCGA-EJ-7791-01A 67 years, male, white, alive, 1118 days 854.5
TCGA-G9-6367-01A 60 years, male, white, alive, 1222 days 853.2
TCGA-HC-7737-01A 55 years, male, black or african american, alive, 1090 days 852.6
TCGA-CH-5737-01A 73 years, male, white, alive, 91 days 850.8
TCGA-HC-7209-01A 60 years, male, white, alive, 440 days 849.8
TCGA-FC-7708-01A 52 years, male, asian, alive, 864 days 845.6
TCGA-YL-A8HK-01A 59 years, male, alive, 1491 days 845.0
TCGA-KK-A7B1-01A 65 years, male, alive, 1063 days 844.1
TCGA-KK-A8II-01A 61 years, male, dead, 3467 days 842.1
TCGA-EJ-5542-01A 60 years, male, white, alive, 1513 days 840.9
TCGA-EJ-A46G-01A 71 years, male, alive, 668 days 837.6
TCGA-EJ-5506-01A 67 years, male, white, alive, 1381 days 836.2
TCGA-EJ-7330-01A 68 years, male, white, alive, 191 days 833.4
TCGA-EJ-7792-01A 53 years, male, white, alive, 1396 days 832.7
TCGA-V1-A9OT-01A 62 years, male, alive, 476 days 830.6
TCGA-FC-7961-01A 62 years, male, white, alive, 469 days 823.7
TCGA-VP-AA1N-01A 70 years, male, alive, 1365 days 823.4
TCGA-HC-7077-01A 64 years, male, black or african american, alive, 2115 days 821.5
TCGA-EJ-7331-01A 64 years, male, white, alive, 742 days 820.2
TCGA-G9-7509-01A 48 years, male, alive, 1610 days 815.8
TCGA-EJ-A65E-01A 67 years, male, alive, 417 days 813.9
TCGA-ZG-A9KY-01A 73 years, male, alive, 130 days 804.5
TCGA-EJ-A7NJ-01A 59 years, male, alive, 197 days 803.3
TCGA-EJ-5511-01A 55 years, male, black or african american, alive, 1476 days 802.1
TCGA-WW-A8ZI-01A 70 years, male, alive, 449 days 802.0
TCGA-J4-A83J-01A 68 years, male, alive, 696 days 796.5
TCGA-EJ-5497-01A 48 years, male, white, alive, 405 days 795.5
TCGA-TK-A8OK-01A 73 years, male, alive, 27 days 792.1
TCGA-EJ-5524-01A 57 years, male, white, alive, 1882 days 780.9
TCGA-2A-A8VL-01A 51 years, male, alive, 621 days 778.7
TCGA-HI-7170-01A 58 years, male, white, alive, 2522 days 778.0
TCGA-EJ-5522-01A 51 years, male, white, alive, 2079 days 773.8
TCGA-VP-A872-01A 60 years, male, alive, 3631 days 771.0
TCGA-V1-A8WW-01A 60 years, male, alive, 1078 days 765.0
TCGA-HC-7213-01A 53 years, male, white, alive, 1219 days 764.3
TCGA-VN-A88N-01A 62 years, male, alive, 766 days 764.0
TCGA-G9-6494-01A 66 years, male, white, alive, 1771 days 759.0
TCGA-V1-A8ML-01A 64 years, male, alive, 448 days 758.3
TCGA-G9-7522-01A 49 years, male, alive, 1078 days 755.9
TCGA-YL-A9WK-01A 63 years, male, alive, 2136 days 752.6
TCGA-V1-A9O5-01A 65 years, male, alive, 1932 days 746.8
TCGA-HC-7232-01A 66 years, male, white, alive, 1161 days 739.5
TCGA-J4-AATZ-01A 66 years, male, alive, 412 days 733.4
TCGA-EJ-5516-01A 49 years, male, white, alive, 1889 days 726.4
TCGA-HC-7821-01A 54 years, male, white, alive, 956 days 726.0
TCGA-HC-7080-01A 66 years, male, white, alive, 1106 days 723.1
TCGA-XK-AAJA-01A 62 years, male, alive, 930 days 722.1
TCGA-KC-A4BN-01A 55 years, male, alive, 1815 days 712.1
TCGA-G9-6342-01A 61 years, male, white, alive, 1696 days 712.0
TCGA-CH-5753-01A 70 years, male, white, alive, 31 days 707.5
TCGA-HC-7081-01A male, white, alive, 1136 days 694.3
TCGA-G9-6362-01A 57 years, male, white, alive, 1443 days 690.7
TCGA-KK-A59X-01A 55 years, male, alive, 2535 days 687.9
TCGA-XJ-A9DX-01A male, alive, 973 days 679.6
TCGA-HC-7211-01A 62 years, male, white, alive, 1221 days 676.0
TCGA-EJ-5515-01A 60 years, male, white, alive, 1832 days 675.9
TCGA-G9-6351-01A 51 years, male, white, alive, 2048 days 674.5
TCGA-X4-A8KQ-01A 65 years, male, alive, 1383 days 671.3
TCGA-EJ-A46H-01A 60 years, male, alive, 724 days 668.3
TCGA-EJ-8468-01A 64 years, male, alive, 2347 days 663.9
TCGA-EJ-7785-01A 54 years, male, white, alive, 1177 days 657.2
TCGA-EJ-5519-01A 64 years, male, white, alive, 1962 days 654.2
TCGA-HC-7748-01A 60 years, male, white, alive, 792 days 648.8
TCGA-ZG-A9M4-01A 65 years, male, alive, 547 days 644.6
TCGA-HC-7742-01A 58 years, male, white, alive, 938 days 643.6
TCGA-EJ-7782-01A 71 years, male, black or african american, alive, 1167 days 632.2
TCGA-VP-A87J-01A 56 years, male, alive, 1774 days 632.1
TCGA-ZG-A9ND-01A 55 years, male, alive, 410 days 628.5
TCGA-EJ-8472-01A 63 years, male, alive, 756 days 613.7
TCGA-HC-A9TE-01A 64 years, male, alive, 587 days 608.7
TCGA-YL-A8HL-01A 58 years, male, alive, 1565 days 607.4
TCGA-CH-5761-01A 61 years, male, white, alive, 28 days 606.7
TCGA-G9-6498-01A 53 years, male, alive, 1952 days 604.0
TCGA-XK-AAIV-01A 63 years, male, alive, 1133 days 593.1
TCGA-HI-7168-01A 62 years, male, white, alive, 3323 days 579.6
TCGA-CH-5789-01A 61 years, male, white, alive, 304 days 578.7
TCGA-G9-6496-01A 61 years, male, white, alive, 1726 days 578.0
TCGA-KK-A6E1-01A 57 years, male, alive, 2198 days 575.9
TCGA-KK-A59Y-01A 56 years, male, alive, 1968 days 564.7
TCGA-G9-6364-01A 72 years, male, white, alive, 1198 days 563.5
TCGA-G9-A9S0-01A 53 years, male, dead, 791 days 555.9
TCGA-G9-6338-01A 61 years, male, white, alive, 2028 days 535.6
TCGA-EJ-5518-01A 66 years, male, white, alive, 2118 days 533.2
TCGA-2A-A8VT-01A 47 years, male, alive, 1373 days 530.0
TCGA-X4-A8KS-01A 61 years, male, alive, 979 days 529.7
TCGA-G9-6366-01A 61 years, male, white, alive, 1947 days 524.0
TCGA-EJ-5507-01A 54 years, male, white, alive, 1457 days 523.0
TCGA-CH-5744-01A 64 years, male, white, alive, 60 days 508.4
TCGA-HC-8265-01B 66 years, male, alive, 483 days 507.9
TCGA-G9-6333-01A 66 years, male, white, alive, 2465 days 506.5
TCGA-G9-7521-01A 52 years, male, alive, 942 days 491.2
TCGA-G9-6369-01A 55 years, male, white, alive, 1215 days 473.8
TCGA-EJ-A65J-01A 62 years, male, alive, 451 days 425.6
TCGA-HC-7210-01A 74 years, male, white, alive, 868 days 417.6
TCGA-HI-7169-01A 55 years, male, white, alive, 2684 days 410.7
TCGA-HC-7752-01A 61 years, male, white, alive, 782 days 356.7
TCGA-HC-7740-01B 59 years, male, white, alive, 717 days 323.7
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PROSTATE CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more

Antibody HPA006124
 Staining
  High
  Medium
  Low
  Not detected
 Intensity
  Strong
  Moderate
  Weak
  Negative
 Quantity
  >75%
  75%-25%
  <25%
  None
 Location
  Nuclear
  Cytoplasmic/membranous
  Cytoplasmic/membranous,nuclear
  None
Click images for details

Contact

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  • contact@proteinatlas.org

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The Human Protein Atlas

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.