HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:1051.4 nTPM
HPA:1051.4 nTPM
GTEx:1190.7 nTPM
FANTOM5:80.0 Scaled Tags Per Million
Pig:247.0 nTPM
Mouse:1778.0 nTPM
Allen mouse:9.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054510Antibody HPA057793
Glial cells LowNot detected
Neuronal cells MediumLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1051.4
Sample id Sample description nTPM
Hippocampus
nTPM: 1044.2
2529 Female, age 94, left hemisphere 1085.3
1898 Male, age 80, left hemisphere 1058.5
2621 Female, age 67, right hemisphere 1056.9
2148 Female, age 91, left hemisphere 1025.4
1855 Male, age 76, left hemisphere 1021.3
1911 Female, age 85, right hemisphere 1017.5
Dentate gyrus
nTPM: 1045.9
2530 Female, age 94, left hemisphere 1109.4
2531 Female, age 67, both hemispheres 1059.1
2010 Male, age 76, both hemispheres 1057.0
2246 Female, age 85, both hemispheres 1039.0
1927 Female, age 91, both hemispheres 1007.2
2528 Male, age 74, both hemispheres 1003.5
Entorhinal gyrus
nTPM: 1051.4
2686 Male, age 75, right hemisphere 1079.6
2117 Female, age 91, right hemisphere 1075.8
2764 Male, age 80, right hemisphere 1071.8
1787 Male, age 76, left hemisphere 1045.5
1938 Female, age 85, left hemisphere 1035.2
2613 Female, age 94, left hemisphere 1000.3
Hippocampus, CA1
nTPM: 1028.7
2082 Female, age 91, right hemisphere 1048.4
2749 Male, age 80, left hemisphere 1035.9
2045 Male, age 76, both hemispheres 1023.4
2527 Male, age 74, both hemispheres 1022.6
1873 Female, age 85, both hemispheres 1013.4
Hippocampus, CA2
nTPM: 1027.4
1963 Male, age 80, left hemisphere 1054.9
2437 Female, age 94, left hemisphere 1038.7
2113 Female, age 91, right hemisphere 1026.6
1940 Female, age 85, left hemisphere 1022.1
1892 Male, age 76, both hemispheres 1011.7
2249 Male, age 74, both hemispheres 1010.3
Hippocampus, CA3
nTPM: 1015.5
2861 Female, age 67, both hemispheres 1052.1
1891 Female, age 85, both hemispheres 1019.0
2620 Female, age 94, left hemisphere 1016.0
1867 Male, age 76, both hemispheres 1015.7
2137 Male, age 80, left hemisphere 999.7
2436 Male, age 74, both hemispheres 990.2
Parahippocampal cortex
nTPM: 1023.7
2018 Male, age 76, both hemispheres 1058.6
2532 Female, age 72, left hemisphere 1051.1
2245 Female, age 91, both hemispheres 1045.4
1990 Female, age 91, right hemisphere 1033.2
2622 Female, age 67, right hemisphere 1029.1
1850 Male, age 80, both hemispheres 1018.6
1933 Female, age 85, both hemispheres 1016.0
2692 Male, age 74, both hemispheres 1014.8
2250 Female, age 67, right hemisphere 1010.0
2693 Female, age 94, both hemispheres 959.7
Perirhinal gyrus
nTPM: 1028.6
1794 Male, age 80, right hemisphere 1060.4
1847 Female, age 91, left hemisphere 1036.4
1841 Female, age 85, right hemisphere 1029.0
2521 Female, age 94, right hemisphere 1008.8
2848 Male, age 76, right hemisphere 1008.6
Subiculum
nTPM: 1040.7
1977 Female, age 85, both hemispheres 1059.5
2438 Female, age 94, left hemisphere 1057.1
2042 Male, age 76, both hemispheres 1044.8
2619 Male, age 74, both hemispheres 1041.5
1901 Male, age 80, both hemispheres 1025.4
2729 Female, age 91, right hemisphere 1016.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1190.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1190.7
Samples: 197

Max nTPM: 3018.8
Min nTPM: 530.8
Std nTPM: 409.2
Median nTPM: 1114.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 3018.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 2694.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 2534.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2460.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 2341.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 2288.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 2275.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 2141.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 2126.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 2012.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1927.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 80.0
FF:10169-103B7 60 years, female 122.4
FF:10153-102I9 76 years, female 37.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 247.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 247.0
Samples: 4

Max nTPM: 310.4
Min nTPM: 163.4
Sample A Female 310.4
Sample B Female 214.2
Sample C Male 300.1
Sample D Male 163.4
Entorhinal cortex
nTPM: 212.2
Samples: 4

Max nTPM: 260.2
Min nTPM: 165.2
Sample A Female 173.0
Sample B Female 250.2
Sample C Male 260.2
Sample D Male 165.2
Subiculum
nTPM: 208.6
Samples: 4

Max nTPM: 272.5
Min nTPM: 184.0
Sample A Female 272.5
Sample B Female 192.2
Sample C Male 185.5
Sample D Male 184.0
Ventral hippocampus
nTPM: 230.2
Samples: 4

Max nTPM: 284.9
Min nTPM: 184.9
Sample A Female 221.9
Sample B Female 184.9
Sample C Male 284.9
Sample D Male 229.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1778.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1778.0
Samples: 4

Max nTPM: 1889.9
Min nTPM: 1710.5
Sample A Male 1800.6
Sample B Male 1710.5
Sample C Female 1889.9
Sample D Female 1711.1
Hippocampal formation
nTPM: 1726.7
Samples: 4

Max nTPM: 1928.9
Min nTPM: 1560.7
Sample A Male 1928.9
Sample B Male 1560.7
Sample C Female 1608.4
Sample D Female 1808.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.5
68321982 Antisense, RP_041207_01_B08, Mouse strain C57BL/6J (56 days, male) 10.2
75774687 Antisense, RP_060530_01_D12, Mouse strain C57BL/6J (56 days, male) 8.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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