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RPS15
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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
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Consensus:1119.1 nTPM
HPA:1119.1 nTPM
FANTOM5:70.9 Scaled Tags Per Million
Pig:295.6 nTPM
Allen mouse:4.0 Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 1119.1
Sample id Sample description nTPM
Area postrema
nTPM: 1099.1
2799 Male, age 61, both hemispheres 1161.0
2306 Male, age 80, both hemispheres 1136.1
2054 Male, age 76, both hemispheres 1000.2
Cuneate nuclei
nTPM: 1045.8
2381 Male, age 80, both hemispheres 1064.4
2376 Male, age 61, both hemispheres 1044.7
2131 Male, age 76, both hemispheres 1028.2
Dorsal medullary reticular nucleus
nTPM: 1051.2
2373 Male, age 61, both hemispheres 1057.7
2040 Female, age 85, both hemispheres 1055.6
2088 Male, age 76, both hemispheres 1040.1
Dorsal motor vagal complex
nTPM: 1092.2
2797 Male, age 61, both hemispheres 1184.3
2643 Male, age 74, both hemispheres 1130.3
2000 Male, age 74, unknown 1087.2
2813 Female, age 72, unknown 1075.5
2844 Male, age 55, unknown 1075.4
2185 Male, age 76, both hemispheres 1070.9
2133 Female, age 91, both hemispheres 1058.6
2807 Female, age 85, both hemispheres 1055.4
Gigantocellular reticular nuclei, medullary
nTPM: 1057.6
2314 Male, age 61, both hemispheres 1138.7
2022 Male, age 76, right hemisphere 1065.0
2310 Male, age 80, both hemispheres 1058.0
1876 Female, age 85, both hemispheres 1035.3
2462 Male, age 74, both hemispheres 1027.0
2387 Female, age 91, both hemispheres 1021.7
Gigantocellular reticular nuclei, pars
nTPM: 1053.3
2084 Female, age 85, both hemispheres 1064.8
2168 Male, age 76, both hemispheres 1060.8
2336 Male, age 61, both hemispheres 1055.6
2330 Male, age 80, both hemispheres 1044.4
2706 Male, age 80, both hemispheres 1040.7
Inferior olive
nTPM: 1104.9
2563 Male, age 74, both hemispheres 1145.5
2628 Female, age 91, both hemispheres 1133.5
2178 Male, age 61, both hemispheres 1110.3
2085 Female, age 85, both hemispheres 1095.0
2379 Male, age 80, both hemispheres 1040.3
Lateral medullary reticular nucleus
nTPM: 1086.3
2852 Male, age 80, both hemispheres 1122.8
2374 Male, age 61, both hemispheres 1090.0
2804 Female, age 91, both hemispheres 1088.0
2190 Female, age 85, both hemispheres 1083.6
2305 Male, age 74, both hemispheres 1073.0
2044 Male, age 76, both hemispheres 1060.5
Medial vestibular nucleus
nTPM: 1059.6
2624 Male, age 61, both hemispheres 1094.8
2801 Male, age 74, both hemispheres 1069.1
2803 Female, age 91, both hemispheres 1065.3
2093 Male, age 80, both hemispheres 1059.9
2743 Female, age 85, both hemispheres 1044.6
2134 Male, age 76, both hemispheres 1023.9
Motor hypoglossal nucleus
nTPM: 1073.9
2182 Male, age 80, both hemispheres 1148.1
2132 Female, age 85, both hemispheres 1090.6
2125 Female, age 91, both hemispheres 1086.1
2461 Male, age 61, both hemispheres 1030.7
2277 Male, age 76, both hemispheres 1014.2
Nucleus ambiguus
nTPM: 1097.6
2071 Male, age 76, both hemispheres 1103.6
2096 Female, age 85, both hemispheres 1091.6
Nucleus cuneatus
nTPM: 1073.7
2564 Male, age 74, both hemispheres 1106.2
2805 Female, age 91, both hemispheres 1085.3
2808 Female, age 85, both hemispheres 1083.2
2562 Male, age 61, both hemispheres 1082.6
2380 Male, age 80, both hemispheres 1065.6
2100 Male, age 76, both hemispheres 1019.5
Nucleus gracilis
nTPM: 1119.1
2627 Male, age 74, both hemispheres 1129.1
2382 Male, age 80, both hemispheres 1117.3
2299 Female, age 85, both hemispheres 1110.9
Nucleus raphe magnus
nTPM: 1046.6
2051 Male, age 76, both hemispheres 1077.2
2172 Female, age 85, both hemispheres 1045.7
2455 Male, age 74, both hemispheres 1045.7
2328 Male, age 80, both hemispheres 1042.6
2160 Male, age 61, both hemispheres 1037.0
2459 Female, age 91, both hemispheres 1031.4
Nucleus raphe obscurus
nTPM: 1096.9
2142 Male, age 76, midline 1112.1
2845 Female, age 85, midline 1096.8
2800 Male, age 61, midline 1081.9
Nucleus raphe pallidus
nTPM: 1092.2
1924 Male, age 61, midline 1115.1
2183 Male, age 80, midline 1090.5
2145 Male, age 76, midline 1071.0
Nucleus tractus solitarii
nTPM: 1013.7
2191 Female, age 85, both hemispheres 1045.3
2656 Male, age 76, both hemispheres 1026.4
2307 Male, age 80, both hemispheres 1022.6
2144 Female, age 91, right hemisphere 960.4
Parvicellular reticular nuclei
nTPM: 1062.9
2095 Male, age 76, both hemispheres 1073.1
2119 Male, age 80, both hemispheres 1071.4
2558 Male, age 74, both hemispheres 1044.1
Parvicellular reticular nuclei, medullary
nTPM: 1069.3
2189 Female, age 91, both hemispheres 1081.8
2181 Male, age 80, left hemisphere 1068.9
2091 Female, age 85, both hemispheres 1057.2
Peritrigeminal nucleus
nTPM: 1095.5
2067 Female, age 85, both hemispheres 1141.6
2136 Male, age 76, both hemispheres 1085.8
2179 Male, age 61, both hemispheres 1059.0
Prepositus hypoglossal nucleus
nTPM: 1064.5
2086 Male, age 80, both hemispheres 1068.1
2855 Female, age 85, right hemisphere 1060.9
Spinal trigeminal nucleus, caudal
nTPM: 1075.1
2312 Male, age 61, both hemispheres 1091.6
2308 Male, age 80, both hemispheres 1088.9
2642 Male, age 74, both hemispheres 1084.2
2390 Female, age 91, both hemispheres 1056.6
2447 Male, age 76, both hemispheres 1054.0
Spinal trigeminal nucleus, interpolar
nTPM: 1064.2
2033 Male, age 80, both hemispheres 1081.4
2066 Male, age 76, right hemisphere 1073.0
2389 Female, age 91, both hemispheres 1064.7
2625 Male, age 61, both hemispheres 1056.1
2386 Female, age 85, both hemispheres 1046.0
Spinal vestibular nucleus
nTPM: 1090.1
2384 Male, age 74, both hemispheres 1128.7
2780 Male, age 80, both hemispheres 1110.9
2748 Male, age 76, both hemispheres 1082.2
2186 Female, age 91, both hemispheres 1075.6
2806 Female, age 85, both hemispheres 1072.8
2796 Male, age 61, both hemispheres 1070.1
Ventral medullary reticular nucleus
nTPM: 1067.2
2060 Male, age 76, both hemispheres 1069.0
2372 Male, age 61, both hemispheres 1065.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 1087.2
2118 Male, age 80, both hemispheres 1103.2
2302 Female, age 91, both hemispheres 1101.7
1986 Male, age 76, both hemispheres 1077.4
2180 Male, age 61, both hemispheres 1077.0
2741 Female, age 85, both hemispheres 1076.5

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 70.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 70.9
FF:10174-103C3 60 years, female 92.5
FF:10038-101F2 18-64 years, mixed 79.7
FF:10155-103A2 76 years, female 40.4

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 295.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 295.6
Samples: 4

Max nTPM: 379.9
Min nTPM: 224.7
Sample A Female 224.7
Sample B Female 229.5
Sample C Male 348.4
Sample D Male 379.9

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.0
75774687 Antisense, RP_060530_01_D12, Mouse strain C57BL/6J (56 days, male) 6.3
68321982 Antisense, RP_041207_01_B08, Mouse strain C57BL/6J (56 days, male) 1.7

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