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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 605.6
Min nTPM: 231.6
Std nTPM: 71.2
Median nTPM:
490_1
67 years, female
605.6
307_1
66 years, female
578.8
2_1
77 years, female
566.0
495_1
57 years, female
525.0
162_1
79 years, female
490.3
375_1
74 years, female
482.4
347_1
72 years, male
476.9
117_1
61 years, male
452.7
35_1
74 years, female
436.7
237_1
82 years, male
435.6
6_1
73 years, female
430.5
389_1
86 years, female
425.8
145_1
84 years, male
423.6
316_1
62 years, male
408.1
126_1
63 years, male
406.4
218_1
71 years, female
404.6
313_1
79 years, female
404.5
229_1
69 years, female
400.8
384_1
83 years, male
400.7
311_1
78 years, male
400.5
415_1
77 years, female
399.9
414_1
84 years, female
394.5
43_1
64 years, female
391.2
319_1
81 years, male
385.8
491_1
89 years, female
383.3
322_1
76 years, male
382.8
518_1
75 years, female
382.7
4_1
88 years, female
378.1
139_1
64 years, female
377.0
217_1
76 years, male
373.5
447_1
81 years, male
373.5
265_1
87 years, male
373.3
526_1
61 years, male
373.0
17_1
71 years, male
371.7
499_1
55 years, female
371.1
379_1
60 years, male
369.6
480_1
63 years, male
364.6
266_1
85 years, male
357.2
42_1
85 years, male
354.4
18_1
88 years, male
354.0
189_1
76 years, male
353.4
153_1
70 years, female
353.3
9_1
66 years, female
352.4
468_1
89 years, male
352.4
406_1
79 years, male
352.2
81_1
67 years, male
350.1
324_1
76 years, male
348.1
377_1
82 years, female
347.1
413_1
59 years, female
344.6
149_1
88 years, male
344.0
142_1
61 years, female
343.9
246_1
77 years, male
342.3
318_1
68 years, male
339.7
41_1
94 years, female
337.3
396_1
62 years, male
333.5
308_1
70 years, female
331.7
137_1
83 years, male
331.6
315_1
62 years, female
329.8
466_1
57 years, female
329.1
321_1
62 years, female
327.5
119_1
70 years, female
326.3
115_1
83 years, male
325.3
320_1
89 years, female
325.0
404_1
82 years, female
316.5
405_1
91 years, male
314.8
293_1
68 years, female
314.6
89_1
63 years, male
314.5
501_1
88 years, male
313.6
173_1
67 years, male
313.1
348_1
84 years, male
312.8
251_1
78 years, male
309.0
376_1
75 years, female
308.3
120_1
70 years, female
308.2
32_1
67 years, male
308.1
109_1
81 years, female
306.9
243_1
75 years, male
306.1
335_1
73 years, female
305.4
314_1
67 years, male
299.9
503_1
68 years, male
299.0
254_1
77 years, female
296.4
386_1
76 years, male
294.5
172_1
72 years, female
293.1
351_1
91 years, male
292.7
99_1
64 years, male
290.8
452_1
88 years, female
290.1
394_1
75 years, female
289.2
286_1
68 years, female
287.3
354_1
81 years, female
287.1
350_1
84 years, female
283.5
352_1
62 years, male
278.2
425_1
59 years, female
275.3
264_1
73 years, female
270.9
177_1
74 years, male
270.4
517_1
88 years, male
269.3
291_1
76 years, male
266.2
353_1
82 years, female
263.2
288_1
66 years, female
262.4
163_1
78 years, male
260.0
506_1
65 years, male
260.0
317_1
60 years, male
254.7
349_1
83 years, male
248.8
356_1
87 years, female
242.8
292_1
71 years, male
236.3
355_1
70 years, female
235.8
295_1
61 years, female
231.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.