HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:573.2 nTPM
HPA:573.2 nTPM
GTEx:550.8 nTPM
FANTOM5:181.9 Scaled Tags Per Million
Pig:584.7 nTPM
Mouse:1374.4 nTPM
Allen mouse:9.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA068438Antibody CAB010107
Glial cells MediumMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 573.2
Sample id Sample description nTPM
Hippocampus
nTPM: 393.7
1898 Male, age 80, left hemisphere 415.1
2621 Female, age 67, right hemisphere 407.6
1911 Female, age 85, right hemisphere 395.9
2529 Female, age 94, left hemisphere 395.0
1855 Male, age 76, left hemisphere 384.4
2148 Female, age 91, left hemisphere 364.0
Dentate gyrus
nTPM: 399.4
2530 Female, age 94, left hemisphere 436.1
2246 Female, age 85, both hemispheres 406.4
2531 Female, age 67, both hemispheres 403.5
2528 Male, age 74, both hemispheres 394.2
2010 Male, age 76, both hemispheres 390.9
1927 Female, age 91, both hemispheres 365.4
Entorhinal gyrus
nTPM: 492.4
2764 Male, age 80, right hemisphere 566.9
1938 Female, age 85, left hemisphere 527.7
2613 Female, age 94, left hemisphere 523.0
1787 Male, age 76, left hemisphere 497.8
2117 Female, age 91, right hemisphere 419.6
2686 Male, age 75, right hemisphere 419.6
Hippocampus, CA1
nTPM: 387.7
2045 Male, age 76, both hemispheres 396.1
2082 Female, age 91, right hemisphere 392.5
2527 Male, age 74, both hemispheres 388.6
2749 Male, age 80, left hemisphere 381.6
1873 Female, age 85, both hemispheres 379.7
Hippocampus, CA2
nTPM: 410.8
1940 Female, age 85, left hemisphere 454.8
2437 Female, age 94, left hemisphere 422.4
1892 Male, age 76, both hemispheres 408.4
2249 Male, age 74, both hemispheres 406.6
2113 Female, age 91, right hemisphere 394.9
1963 Male, age 80, left hemisphere 377.4
Hippocampus, CA3
nTPM: 387.4
1891 Female, age 85, both hemispheres 422.9
1867 Male, age 76, both hemispheres 411.4
2436 Male, age 74, both hemispheres 379.3
2620 Female, age 94, left hemisphere 375.3
2137 Male, age 80, left hemisphere 375.0
2861 Female, age 67, both hemispheres 360.8
Parahippocampal cortex
nTPM: 498.1
1850 Male, age 80, both hemispheres 620.9
2532 Female, age 72, left hemisphere 603.9
1933 Female, age 85, both hemispheres 546.0
2693 Female, age 94, both hemispheres 483.8
2245 Female, age 91, both hemispheres 481.1
1990 Female, age 91, right hemisphere 476.3
2018 Male, age 76, both hemispheres 454.1
2250 Female, age 67, right hemisphere 450.3
2622 Female, age 67, right hemisphere 446.6
2692 Male, age 74, both hemispheres 418.1
Perirhinal gyrus
nTPM: 573.2
1841 Female, age 85, right hemisphere 622.8
1794 Male, age 80, right hemisphere 611.9
2848 Male, age 76, right hemisphere 577.0
2521 Female, age 94, right hemisphere 527.5
1847 Female, age 91, left hemisphere 526.9
Subiculum
nTPM: 435.9
1977 Female, age 85, both hemispheres 498.1
2438 Female, age 94, left hemisphere 448.4
2042 Male, age 76, both hemispheres 436.9
2619 Male, age 74, both hemispheres 429.9
1901 Male, age 80, both hemispheres 427.6
2729 Female, age 91, right hemisphere 374.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 550.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 550.8
Samples: 197

Max nTPM: 1801.9
Min nTPM: 185.0
Std nTPM: 245.6
Median nTPM: 489.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1801.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 1533.2
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 1224.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1188.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 1181.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 1177.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1105.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 1032.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 1009.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 996.0
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 991.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 181.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 181.9
FF:10169-103B7 60 years, female 241.7
FF:10153-102I9 76 years, female 122.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 584.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 401.1
Samples: 4

Max nTPM: 570.1
Min nTPM: 233.1
Sample A Female 570.1
Sample B Female 358.6
Sample C Male 442.6
Sample D Male 233.1
Entorhinal cortex
nTPM: 528.9
Samples: 4

Max nTPM: 580.5
Min nTPM: 480.7
Sample A Female 514.1
Sample B Female 540.4
Sample C Male 580.5
Sample D Male 480.7
Subiculum
nTPM: 584.7
Samples: 4

Max nTPM: 742.8
Min nTPM: 482.2
Sample A Female 742.8
Sample B Female 579.0
Sample C Male 482.2
Sample D Male 534.7
Ventral hippocampus
nTPM: 357.9
Samples: 4

Max nTPM: 427.0
Min nTPM: 318.7
Sample A Female 351.1
Sample B Female 318.7
Sample C Male 427.0
Sample D Male 334.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1374.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1374.4
Samples: 4

Max nTPM: 1565.1
Min nTPM: 1196.7
Sample A Male 1345.0
Sample B Male 1565.1
Sample C Female 1196.7
Sample D Female 1390.7
Hippocampal formation
nTPM: 658.5
Samples: 4

Max nTPM: 883.8
Min nTPM: 537.9
Sample A Male 883.8
Sample B Male 537.9
Sample C Female 570.6
Sample D Female 641.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.0
71016595 Antisense, RP_050725_03_A05, Mouse strain C57BL/6J (56 days, male) 10.3
68632984 Antisense, RP_050125_02_B12, Mouse strain C57BL/6J (56 days, male) 7.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.