We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
STMN1
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • STMN1
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:537.1 nTPM
HPA:537.1 nTPM
GTEx:1383.2 nTPM
FANTOM5:408.6 Scaled Tags Per Million
Pig:816.2 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 537.1
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 487.7
2816 Male, age 47, midline 510.8
1981 Female, age 72, midline 509.5
2194 Female, age 79, both hemispheres 489.6
2565 Male, age 75, midline 467.9
2048 Male, age 55, midline 460.7
Cervical spinal cord, dorsal horn
nTPM: 537.1
2296 Male, age 66, both hemispheres 796.9
2173 Female, age 72, unknown 563.4
2069 Male, age 47, both hemispheres 521.8
2297 Male, age 75, both hemispheres 459.4
1877 Male, age 55, unknown 457.2
2721 Male, age 90, both hemispheres 423.7
Cervical spinal cord, ventral horn
nTPM: 475.6
2480 Male, age 75, both hemispheres 502.8
2098 Female, age 72, unknown 497.0
2820 Female, age 79, both hemispheres 477.4
2295 Male, age 66, both hemispheres 465.1
2809 Male, age 90, both hemispheres 455.9
2068 Male, age 55, unknown 455.6

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1383.2
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1383.2
Samples: 159

Max nTPM: 3024.7
Min nTPM: 397.8
Std nTPM: 476.6
Median nTPM: 1362.9
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 3024.7
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 2566.0
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 2521.2
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 2403.8
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 2367.4
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 2337.2
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 2285.0
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 2226.2
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 2185.0
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 2153.7
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 2147.4
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 2002.6
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 1999.0
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 1996.9
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 1994.7
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 1988.6
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 1982.2
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 1938.4
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1934.5
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 1921.6
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1916.8
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 1915.4
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 1879.0
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 1863.2
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 1859.5
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 1848.1
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 1845.3
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 1811.0
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 1810.4
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1793.3
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1786.7
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 1781.9
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1780.6
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 1776.5
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 1772.6
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 1772.0
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 1771.7
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 1769.8
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 1769.2
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 1747.5
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 1733.6
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 1730.0
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 1709.5
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1708.6
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1705.1
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 1664.5
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 1663.3
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 1658.7
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1633.6
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 1612.9
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 1606.0
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1582.2
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 1578.5
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1566.5
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 1555.8
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 1543.3
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 1542.6
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1514.7
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 1511.9
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 1508.8
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 1495.1
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 1490.0
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1485.4
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 1463.8
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 1458.7
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 1444.9
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 1428.1
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 1420.2
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 1415.2
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1406.5
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 1396.1
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1396.0
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 1392.5
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 1388.4
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 1386.1
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 1384.8
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 1384.4
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 1376.7
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1375.2
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 1362.9
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1350.6
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 1347.5
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 1341.2
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 1326.5
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 1325.2
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 1322.8
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1298.6
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 1291.5
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 1278.8
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 1268.2
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 1259.6
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1242.4
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 1241.1
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 1238.2
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1234.8
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 1231.7
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 1223.1
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 1219.7
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 1212.1
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 1208.6
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 1208.5
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1205.4
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 1202.8
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 1198.5
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 1183.9
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1175.0
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 1149.8
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 1147.8
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 1146.8
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 1115.7
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 1115.7
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 1115.1
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 1109.7
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1104.7
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 1103.7
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 1099.8
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 1072.3
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 1063.2
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 1055.3
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 1054.5
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 1048.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 1010.7
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 1005.5
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1004.3
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 1004.2
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 991.2
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 971.0
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 964.9
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 949.2
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 929.9
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 929.4
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 919.4
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 905.9
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 900.3
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 896.2
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 875.8
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 857.7
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 843.5
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 822.6
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 818.2
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 794.4
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 750.9
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 748.1
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 747.6
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 737.3
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 716.2
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 710.8
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 696.6
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 685.9
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 685.2
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 656.4
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 652.0
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 633.9
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 567.1
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 548.1
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 539.6
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 516.2
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 471.8
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 397.8
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 408.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 408.6
FF:10181-103D1 60 years, female 424.7
FF:10159-103A6 76 years, female 392.5

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 816.2
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 703.6
Samples: 4

Max nTPM: 835.7
Min nTPM: 622.7
Sample A Female 622.7
Sample B Female 835.7
Sample C Male 709.3
Sample D Male 646.5
Ventral spinal cord
nTPM: 816.3
Samples: 4

Max nTPM: 973.3
Min nTPM: 678.6
Sample A Female 685.2
Sample B Female 927.9
Sample C Male 678.6
Sample D Male 973.3

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.