HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
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m
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Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:675.6 nTPM
HPA:675.6 nTPM
GTEx:558.0 nTPM
FANTOM5:768.0 Scaled Tags Per Million
Pig:197.9 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031801
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 675.6
Sample id Sample description nTPM
Hippocampus
nTPM: 674.6
1898 Male, age 80, left hemisphere 691.8
2529 Female, age 94, left hemisphere 683.9
2621 Female, age 67, right hemisphere 671.0
1911 Female, age 85, right hemisphere 669.8
1855 Male, age 76, left hemisphere 666.4
2148 Female, age 91, left hemisphere 664.7
Dentate gyrus
nTPM: 670.5
2530 Female, age 94, left hemisphere 695.3
2010 Male, age 76, both hemispheres 683.1
2246 Female, age 85, both hemispheres 664.2
1927 Female, age 91, both hemispheres 664.1
2531 Female, age 67, both hemispheres 660.8
2528 Male, age 74, both hemispheres 655.8
Entorhinal gyrus
nTPM: 672.3
2686 Male, age 75, right hemisphere 694.4
2117 Female, age 91, right hemisphere 687.3
1787 Male, age 76, left hemisphere 671.5
1938 Female, age 85, left hemisphere 667.5
2764 Male, age 80, right hemisphere 663.2
2613 Female, age 94, left hemisphere 650.0
Hippocampus, CA1
nTPM: 667.9
2082 Female, age 91, right hemisphere 679.8
1873 Female, age 85, both hemispheres 673.5
2045 Male, age 76, both hemispheres 669.6
2527 Male, age 74, both hemispheres 659.5
2749 Male, age 80, left hemisphere 656.9
Hippocampus, CA2
nTPM: 672.8
1892 Male, age 76, both hemispheres 682.8
1963 Male, age 80, left hemisphere 680.3
1940 Female, age 85, left hemisphere 671.9
2437 Female, age 94, left hemisphere 669.6
2113 Female, age 91, right hemisphere 668.7
2249 Male, age 74, both hemispheres 663.3
Hippocampus, CA3
nTPM: 661.1
1891 Female, age 85, both hemispheres 681.5
1867 Male, age 76, both hemispheres 678.5
2137 Male, age 80, left hemisphere 663.3
2861 Female, age 67, both hemispheres 653.2
2436 Male, age 74, both hemispheres 648.0
2620 Female, age 94, left hemisphere 642.1
Parahippocampal cortex
nTPM: 667.8
2018 Male, age 76, both hemispheres 694.7
1933 Female, age 85, both hemispheres 672.8
1850 Male, age 80, both hemispheres 671.2
2250 Female, age 67, right hemisphere 671.1
2245 Female, age 91, both hemispheres 669.7
1990 Female, age 91, right hemisphere 665.6
2692 Male, age 74, both hemispheres 662.6
2532 Female, age 72, left hemisphere 662.0
2693 Female, age 94, both hemispheres 654.6
2622 Female, age 67, right hemisphere 653.6
Perirhinal gyrus
nTPM: 668.7
1841 Female, age 85, right hemisphere 679.0
1794 Male, age 80, right hemisphere 670.6
1847 Female, age 91, left hemisphere 669.5
2848 Male, age 76, right hemisphere 666.0
2521 Female, age 94, right hemisphere 658.4
Subiculum
nTPM: 675.6
1977 Female, age 85, both hemispheres 684.0
2042 Male, age 76, both hemispheres 683.5
2438 Female, age 94, left hemisphere 682.2
1901 Male, age 80, both hemispheres 677.4
2729 Female, age 91, right hemisphere 664.8
2619 Male, age 74, both hemispheres 661.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 558.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 558.0
Samples: 197

Max nTPM: 1825.5
Min nTPM: 250.2
Std nTPM: 194.9
Median nTPM: 516.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1825.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1196.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1133.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1079.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 1070.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1029.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 975.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 968.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 927.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 907.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 901.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 768.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 768.0
FF:10169-103B7 60 years, female 916.6
FF:10153-102I9 76 years, female 619.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 197.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 197.9
Samples: 4

Max nTPM: 275.7
Min nTPM: 134.8
Sample A Female 275.7
Sample B Female 169.4
Sample C Male 211.7
Sample D Male 134.8
Entorhinal cortex
nTPM: 160.7
Samples: 4

Max nTPM: 196.4
Min nTPM: 112.4
Sample A Female 148.4
Sample B Female 196.4
Sample C Male 185.7
Sample D Male 112.4
Subiculum
nTPM: 155.6
Samples: 4

Max nTPM: 216.0
Min nTPM: 116.8
Sample A Female 216.0
Sample B Female 147.1
Sample C Male 116.8
Sample D Male 142.6
Ventral hippocampus
nTPM: 158.9
Samples: 4

Max nTPM: 173.7
Min nTPM: 137.6
Sample A Female 173.7
Sample B Female 137.6
Sample C Male 160.7
Sample D Male 163.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.