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RPS25
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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:718.4 nTPM
HPA:718.4 nTPM
FANTOM5:721.6 Scaled Tags Per Million
Pig:226.0 nTPM

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 718.4
Sample id Sample description nTPM
Area postrema
nTPM: 705.0
2799 Male, age 61, both hemispheres 728.9
2306 Male, age 80, both hemispheres 713.5
2054 Male, age 76, both hemispheres 672.5
Cuneate nuclei
nTPM: 681.1
2376 Male, age 61, both hemispheres 694.8
2381 Male, age 80, both hemispheres 687.4
2131 Male, age 76, both hemispheres 661.2
Dorsal medullary reticular nucleus
nTPM: 689.6
2373 Male, age 61, both hemispheres 703.7
2040 Female, age 85, both hemispheres 692.3
2088 Male, age 76, both hemispheres 672.7
Dorsal motor vagal complex
nTPM: 698.8
2797 Male, age 61, both hemispheres 761.6
2643 Male, age 74, both hemispheres 709.8
2807 Female, age 85, both hemispheres 705.9
2133 Female, age 91, both hemispheres 697.6
2000 Male, age 74, unknown 684.4
2844 Male, age 55, unknown 680.8
2813 Female, age 72, unknown 676.4
2185 Male, age 76, both hemispheres 673.6
Gigantocellular reticular nuclei, medullary
nTPM: 691.8
2314 Male, age 61, both hemispheres 726.8
1876 Female, age 85, both hemispheres 698.5
2387 Female, age 91, both hemispheres 691.4
2022 Male, age 76, right hemisphere 684.3
2310 Male, age 80, both hemispheres 682.4
2462 Male, age 74, both hemispheres 667.0
Gigantocellular reticular nuclei, pars
nTPM: 679.5
2084 Female, age 85, both hemispheres 694.7
2706 Male, age 80, both hemispheres 685.8
2336 Male, age 61, both hemispheres 678.7
2168 Male, age 76, both hemispheres 669.9
2330 Male, age 80, both hemispheres 668.2
Inferior olive
nTPM: 712.7
2178 Male, age 61, both hemispheres 736.8
2563 Male, age 74, both hemispheres 716.0
2085 Female, age 85, both hemispheres 708.7
2379 Male, age 80, both hemispheres 702.8
2628 Female, age 91, both hemispheres 699.2
Lateral medullary reticular nucleus
nTPM: 704.3
2804 Female, age 91, both hemispheres 713.2
2852 Male, age 80, both hemispheres 711.7
2190 Female, age 85, both hemispheres 710.7
2305 Male, age 74, both hemispheres 705.2
2374 Male, age 61, both hemispheres 701.2
2044 Male, age 76, both hemispheres 683.6
Medial vestibular nucleus
nTPM: 689.3
2803 Female, age 91, both hemispheres 703.3
2801 Male, age 74, both hemispheres 696.8
2624 Male, age 61, both hemispheres 693.7
2093 Male, age 80, both hemispheres 691.4
2743 Female, age 85, both hemispheres 681.6
2134 Male, age 76, both hemispheres 669.0
Motor hypoglossal nucleus
nTPM: 690.3
2132 Female, age 85, both hemispheres 718.4
2125 Female, age 91, both hemispheres 706.7
2182 Male, age 80, both hemispheres 692.4
2461 Male, age 61, both hemispheres 671.5
2277 Male, age 76, both hemispheres 662.5
Nucleus ambiguus
nTPM: 684.7
2071 Male, age 76, both hemispheres 725.3
2096 Female, age 85, both hemispheres 644.1
Nucleus cuneatus
nTPM: 696.2
2808 Female, age 85, both hemispheres 719.4
2380 Male, age 80, both hemispheres 699.4
2805 Female, age 91, both hemispheres 695.9
2562 Male, age 61, both hemispheres 695.6
2564 Male, age 74, both hemispheres 695.2
2100 Male, age 76, both hemispheres 671.6
Nucleus gracilis
nTPM: 703.5
2382 Male, age 80, both hemispheres 708.9
2627 Male, age 74, both hemispheres 702.6
2299 Female, age 85, both hemispheres 698.9
Nucleus raphe magnus
nTPM: 672.5
2051 Male, age 76, both hemispheres 686.1
2459 Female, age 91, both hemispheres 677.3
2455 Male, age 74, both hemispheres 673.9
2328 Male, age 80, both hemispheres 670.7
2160 Male, age 61, both hemispheres 666.9
2172 Female, age 85, both hemispheres 660.1
Nucleus raphe obscurus
nTPM: 718.4
2845 Female, age 85, midline 720.8
2800 Male, age 61, midline 717.5
2142 Male, age 76, midline 716.9
Nucleus raphe pallidus
nTPM: 713.5
1924 Male, age 61, midline 728.1
2145 Male, age 76, midline 711.7
2183 Male, age 80, midline 700.8
Nucleus tractus solitarii
nTPM: 682.2
2144 Female, age 91, right hemisphere 705.2
2191 Female, age 85, both hemispheres 691.3
2656 Male, age 76, both hemispheres 670.2
2307 Male, age 80, both hemispheres 662.0
Parvicellular reticular nuclei
nTPM: 686.1
2095 Male, age 76, both hemispheres 698.7
2119 Male, age 80, both hemispheres 694.4
2558 Male, age 74, both hemispheres 665.2
Parvicellular reticular nuclei, medullary
nTPM: 688.8
2091 Female, age 85, both hemispheres 691.2
2181 Male, age 80, left hemisphere 688.2
2189 Female, age 91, both hemispheres 687.0
Peritrigeminal nucleus
nTPM: 706.1
2067 Female, age 85, both hemispheres 722.6
2136 Male, age 76, both hemispheres 703.7
2179 Male, age 61, both hemispheres 692.0
Prepositus hypoglossal nucleus
nTPM: 699.4
2855 Female, age 85, right hemisphere 707.9
2086 Male, age 80, both hemispheres 690.9
Spinal trigeminal nucleus, caudal
nTPM: 685.3
2642 Male, age 74, both hemispheres 693.7
2312 Male, age 61, both hemispheres 691.7
2308 Male, age 80, both hemispheres 685.4
2390 Female, age 91, both hemispheres 683.4
2447 Male, age 76, both hemispheres 672.5
Spinal trigeminal nucleus, interpolar
nTPM: 692.4
2033 Male, age 80, both hemispheres 705.7
2389 Female, age 91, both hemispheres 694.5
2386 Female, age 85, both hemispheres 689.5
2066 Male, age 76, right hemisphere 687.6
2625 Male, age 61, both hemispheres 684.5
Spinal vestibular nucleus
nTPM: 705.9
2384 Male, age 74, both hemispheres 724.2
2806 Female, age 85, both hemispheres 716.0
2796 Male, age 61, both hemispheres 705.8
2780 Male, age 80, both hemispheres 703.0
2186 Female, age 91, both hemispheres 698.6
2748 Male, age 76, both hemispheres 688.1
Ventral medullary reticular nucleus
nTPM: 702.3
2372 Male, age 61, both hemispheres 717.7
2060 Male, age 76, both hemispheres 687.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 709.4
2118 Male, age 80, both hemispheres 725.8
1986 Male, age 76, both hemispheres 711.2
2180 Male, age 61, both hemispheres 707.1
2302 Female, age 91, both hemispheres 703.6
2741 Female, age 85, both hemispheres 699.4

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 721.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 721.6
FF:10174-103C3 60 years, female 1200.1
FF:10155-103A2 76 years, female 578.7
FF:10038-101F2 18-64 years, mixed 386.0

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 226.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 225.9
Samples: 4

Max nTPM: 288.4
Min nTPM: 182.5
Sample A Female 200.5
Sample B Female 182.5
Sample C Male 232.3
Sample D Male 288.4

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