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RPS25
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BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:748.0 nTPM
HPA:748.0 nTPM
GTEx:757.3 nTPM
FANTOM5:1086.5 Scaled Tags Per Million
Pig:297.4 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 748.0
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 712.7
1981 Female, age 72, midline 748.9
2565 Male, age 75, midline 725.6
2048 Male, age 55, midline 721.5
2816 Male, age 47, midline 689.9
2194 Female, age 79, both hemispheres 677.4
Cervical spinal cord, dorsal horn
nTPM: 718.3
2173 Female, age 72, unknown 758.5
2069 Male, age 47, both hemispheres 748.9
2296 Male, age 66, both hemispheres 741.2
1877 Male, age 55, unknown 720.9
2297 Male, age 75, both hemispheres 672.8
2721 Male, age 90, both hemispheres 667.6
Cervical spinal cord, ventral horn
nTPM: 748.0
2480 Male, age 75, both hemispheres 813.0
2098 Female, age 72, unknown 782.8
2809 Male, age 90, both hemispheres 780.4
2068 Male, age 55, unknown 728.4
2295 Male, age 66, both hemispheres 724.6
2820 Female, age 79, both hemispheres 658.8

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 757.3
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 757.3
Samples: 159

Max nTPM: 1289.7
Min nTPM: 290.3
Std nTPM: 221.2
Median nTPM: 727.9
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 1289.7
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1266.1
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1264.8
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 1260.8
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 1259.1
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 1251.8
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 1230.4
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 1209.6
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1192.2
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 1147.5
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 1108.8
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 1102.5
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1096.7
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 1070.9
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 1058.7
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1053.4
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 1051.4
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 1050.7
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1046.5
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 1027.9
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 1026.3
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 1022.1
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 1021.7
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1020.9
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 1019.6
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 1017.8
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 1015.4
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 1003.7
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1002.9
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 996.2
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 990.7
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 979.6
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 975.6
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 973.8
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 967.5
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 952.2
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 949.5
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 936.5
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 931.6
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 916.3
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 892.0
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 883.8
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 873.6
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 864.7
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 863.7
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 858.1
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 848.8
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 848.5
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 845.7
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 836.5
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 835.6
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 827.4
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 824.5
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 823.1
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 819.4
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 816.8
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 814.9
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 811.1
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 806.4
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 801.2
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 798.9
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 797.7
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 793.6
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 790.0
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 786.6
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 775.7
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 773.2
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 771.0
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 770.3
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 769.9
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 765.8
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 759.3
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 754.0
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 741.2
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 739.7
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 739.3
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 734.3
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 729.2
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 728.1
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 727.9
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 714.3
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 713.9
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 711.8
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 706.6
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 704.8
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 695.3
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 674.8
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 669.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 669.6
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 668.7
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 668.1
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 667.8
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 667.2
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 662.9
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 655.3
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 653.0
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 652.8
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 651.5
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 646.5
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 644.9
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 644.8
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 641.1
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 637.9
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 636.7
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 634.9
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 626.2
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 625.5
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 624.6
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 624.2
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 623.4
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 622.0
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 619.2
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 609.8
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 609.6
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 606.6
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 602.4
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 600.3
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 600.1
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 596.8
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 593.8
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 591.6
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 591.3
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 590.3
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 586.2
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 579.3
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 578.5
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 578.4
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 577.6
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 577.3
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 575.5
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 571.8
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 570.9
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 567.9
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 564.5
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 552.8
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 552.6
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 551.9
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 547.7
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 541.6
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 534.7
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 530.7
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 523.3
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 514.0
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 511.5
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 506.1
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 499.6
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 497.6
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 491.2
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 486.1
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 445.4
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 428.0
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 399.6
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 392.4
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 385.7
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 372.3
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 359.0
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 358.3
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 353.1
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 290.3
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1086.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 1086.5
FF:10181-103D1 60 years, female 1416.1
FF:10159-103A6 76 years, female 756.9

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 297.4
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 297.4
Samples: 4

Max nTPM: 419.5
Min nTPM: 207.6
Sample A Female 222.3
Sample B Female 340.2
Sample C Male 419.5
Sample D Male 207.6
Ventral spinal cord
nTPM: 262.0
Samples: 4

Max nTPM: 300.5
Min nTPM: 218.0
Sample A Female 218.0
Sample B Female 278.1
Sample C Male 300.5
Sample D Male 251.5

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