HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:301.6 nTPM
HPA:301.6 nTPM
GTEx:469.9 nTPM
FANTOM5:908.5 Scaled Tags Per Million
Pig:106.5 nTPM
Mouse:35.7 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027541
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 301.6
Sample id Sample description nTPM
Hippocampus
nTPM: 267.9
1898 Male, age 80, left hemisphere 308.0
2621 Female, age 67, right hemisphere 275.0
1855 Male, age 76, left hemisphere 269.3
2529 Female, age 94, left hemisphere 264.4
1911 Female, age 85, right hemisphere 259.5
2148 Female, age 91, left hemisphere 231.0
Dentate gyrus
nTPM: 273.1
2010 Male, age 76, both hemispheres 361.5
2530 Female, age 94, left hemisphere 317.3
2528 Male, age 74, both hemispheres 262.5
2531 Female, age 67, both hemispheres 238.9
2246 Female, age 85, both hemispheres 233.7
1927 Female, age 91, both hemispheres 224.8
Entorhinal gyrus
nTPM: 256.2
2117 Female, age 91, right hemisphere 322.5
1787 Male, age 76, left hemisphere 291.8
2764 Male, age 80, right hemisphere 250.7
1938 Female, age 85, left hemisphere 241.4
2613 Female, age 94, left hemisphere 215.7
2686 Male, age 75, right hemisphere 215.3
Hippocampus, CA1
nTPM: 254.4
2045 Male, age 76, both hemispheres 304.7
2749 Male, age 80, left hemisphere 249.8
2527 Male, age 74, both hemispheres 242.6
1873 Female, age 85, both hemispheres 238.3
2082 Female, age 91, right hemisphere 236.5
Hippocampus, CA2
nTPM: 291.1
1940 Female, age 85, left hemisphere 349.6
1892 Male, age 76, both hemispheres 325.2
2249 Male, age 74, both hemispheres 286.5
2437 Female, age 94, left hemisphere 271.7
1963 Male, age 80, left hemisphere 271.6
2113 Female, age 91, right hemisphere 241.7
Hippocampus, CA3
nTPM: 253.3
1867 Male, age 76, both hemispheres 363.7
1891 Female, age 85, both hemispheres 276.8
2436 Male, age 74, both hemispheres 252.6
2137 Male, age 80, left hemisphere 234.3
2861 Female, age 67, both hemispheres 197.2
2620 Female, age 94, left hemisphere 195.1
Parahippocampal cortex
nTPM: 254.0
2018 Male, age 76, both hemispheres 416.6
2532 Female, age 72, left hemisphere 268.1
2250 Female, age 67, right hemisphere 260.7
1850 Male, age 80, both hemispheres 243.7
2692 Male, age 74, both hemispheres 242.4
1990 Female, age 91, right hemisphere 240.8
2245 Female, age 91, both hemispheres 238.1
1933 Female, age 85, both hemispheres 225.3
2693 Female, age 94, both hemispheres 213.3
2622 Female, age 67, right hemisphere 190.7
Perirhinal gyrus
nTPM: 226.3
2848 Male, age 76, right hemisphere 256.4
2521 Female, age 94, right hemisphere 231.6
1794 Male, age 80, right hemisphere 225.9
1841 Female, age 85, right hemisphere 209.6
1847 Female, age 91, left hemisphere 208.1
Subiculum
nTPM: 301.6
2042 Male, age 76, both hemispheres 415.2
1901 Male, age 80, both hemispheres 330.2
2438 Female, age 94, left hemisphere 289.9
2619 Male, age 74, both hemispheres 261.2
1977 Female, age 85, both hemispheres 258.2
2729 Female, age 91, right hemisphere 255.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 469.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 469.9
Samples: 197

Max nTPM: 3587.1
Min nTPM: 13.2
Std nTPM: 452.4
Median nTPM: 352.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 3587.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 2758.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 2415.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 1994.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 1660.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 1533.5
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 1383.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 1302.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 1270.8
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 1265.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 1077.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 908.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 908.5
FF:10169-103B7 60 years, female 1126.9
FF:10153-102I9 76 years, female 690.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 106.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 106.6
Samples: 4

Max nTPM: 188.0
Min nTPM: 36.0
Sample A Female 188.0
Sample B Female 77.1
Sample C Male 125.1
Sample D Male 36.0
Entorhinal cortex
nTPM: 41.3
Samples: 4

Max nTPM: 74.9
Min nTPM: 23.6
Sample A Female 39.5
Sample B Female 74.9
Sample C Male 23.6
Sample D Male 27.2
Subiculum
nTPM: 44.7
Samples: 4

Max nTPM: 61.8
Min nTPM: 28.6
Sample A Female 61.8
Sample B Female 53.6
Sample C Male 28.6
Sample D Male 34.6
Ventral hippocampus
nTPM: 63.8
Samples: 4

Max nTPM: 87.4
Min nTPM: 34.0
Sample A Female 83.0
Sample B Female 34.0
Sample C Male 50.6
Sample D Male 87.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.7
Samples: 4

Max nTPM: 45.1
Min nTPM: 27.5
Sample A Male 27.5
Sample B Male 33.8
Sample C Female 36.3
Sample D Female 45.1
Hippocampal formation
nTPM: 10.1
Samples: 4

Max nTPM: 15.8
Min nTPM: 5.0
Sample A Male 14.2
Sample B Male 5.0
Sample C Female 5.2
Sample D Female 15.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
513488 Antisense, RP_040810_01_H07, Mouse strain C57BL/6J (56 days, male) 1.7
69015350 Antisense, RP_050310_02_G08, Mouse strain C57BL/6J (56 days, male) 1.3
75651180 Antisense, RP_060518_01_C06, Mouse strain C57BL/6J (56 days, male) 1.1
70436740 Antisense, RP_050310_02_G08, Mouse strain C57BL/6J (56 days, male) 0.7

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The Human Protein Atlas

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