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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Bergmann glia - cytoplasm/membrane: Medium
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Medium
Granular cells - nucleus: Medium
Molecular layer - neuropil: Low
Molecular layer cells - cytoplasm/membrane: High
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Not detected
Processes in molecular layer: Medium
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: Low
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Low
Synaptic glomeruli - core: Not detected
White matter cells - cytoplasm/membrane: Medium
White matter cells - nucleus: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:775.0 nTPM
HPA:775.0 nTPM
GTEx:632.2 nTPM
FANTOM5:865.6 Scaled Tags Per Million
Pig:186.9 nTPM
Mouse:540.0 nTPM
Allen mouse:20.4 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA065539Antibody HPA068768Antibody CAB008363Antibody CAB069921
Bergmann glia - cytoplasm/membrane ---Medium
Bergmann glia - nucleus ---Not detected
GLUC cells - cytoplasm/membrane ---Not detected
GLUC cells - nucleus ---Not detected
Purkinje cells Not detectedLowNot detected-
Purkinje cells - cytoplasm/membrane ---Low
Purkinje cells - dendrites ---Not detected
Purkinje cells - nucleus ---Not detected
Cells in granular layer Not detectedMediumMedium-
Cells in molecular layer Not detectedNot detectedMedium-
Granular cells - cytoplasm/membrane ---Medium
Granular cells - nucleus ---Medium
Molecular layer - neuropil ---Low
Molecular layer cells - cytoplasm/membrane ---High
Molecular layer cells - nucleus ---Not detected
Processes in granular layer ---Not detected
Processes in molecular layer ---Medium
Processes in white matter ---Not detected
Synaptic glomeruli - capsule ---Low
Synaptic glomeruli - core ---Not detected
White matter cells - cytoplasm/membrane ---Medium
White matter cells - nucleus ---Medium









CEREBELLUM - HPA Brain RNA-seq
Max nTPM 775.0
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 488.1
2003 Female, age 85, right hemisphere 617.0
2101 Male, age 74, right hemisphere 587.1
1768 Female, age 72, unknown 537.1
2055 Female, age 91, right hemisphere 501.1
2006 Male, age 61, right hemisphere 441.7
1769 Male, age 76, right hemisphere 416.8
1774 Male, age 80, left hemisphere 408.4
1788 Male, age 55, unknown 395.5
Cerebellar nuclei
nTPM: 775.0
2783 Female, age 72, unknown 1003.3
2882 Male, age 76, left hemisphere 887.9
2005 Male, age 80, left hemisphere 873.8
1879 Male, age 55, unknown 844.8
1966 Female, age 91, left hemisphere 774.6
2175 Male, age 61, right hemisphere 769.6
2177 Female, age 85, both hemispheres 752.7
1871 Male, age 74, unknown 562.5
2318 Male, age 74, left hemisphere 505.5
Flocculonodular lobe
nTPM: 444.8
1792 Male, age 74, unknown 571.3
1765 Male, age 55, unknown 537.4
2176 Female, age 91, right hemisphere 489.5
1771 Male, age 80, left hemisphere 396.8
1835 Female, age 85, right hemisphere 383.4
1767 Male, age 76, left hemisphere 367.8
2004 Male, age 61, right hemisphere 367.4
Vermis
nTPM: 441.4
1751 Male, age 74, right hemisphere 555.0
1778 Female, age 91, left hemisphere 511.3
1928 Female, age 72, unknown 438.8
1770 Male, age 76, left hemisphere 433.5
2834 Male, age 80, left hemisphere 418.8
2460 Male, age 61, both hemispheres 414.8
1825 Male, age 74, unknown 413.2
1988 Female, age 85, left hemisphere 399.2
1766 Male, age 55, unknown 388.2

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 632.2
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 532.4
Samples: 215

Max nTPM: 3109.9
Min nTPM: 72.1
Std nTPM: 349.1
Median nTPM: 482.4
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 3109.9
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 2106.4
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 1797.6
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 1547.4
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 1511.8
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 1446.7
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 1381.0
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 1202.2
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 1133.3
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 1132.0
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 1127.2
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 1104.5
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 1082.1
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 1027.0
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 995.0
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 953.7
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 943.0
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 941.8
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 918.4
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 888.6
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 871.2
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 840.8
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 809.1
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 800.7
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 800.5
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 794.7
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 791.1
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 791.1
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 790.6
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 789.6
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 750.6
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 749.2
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 747.1
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 745.4
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 729.7
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 727.9
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 725.1
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 722.5
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 717.0
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 708.6
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 704.1
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 701.3
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 700.8
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 699.8
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 698.1
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 695.1
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 694.3
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 685.8
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 685.1
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 682.3
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 676.1
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 658.0
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 657.6
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 654.0
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 652.1
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 650.5
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 648.6
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 647.5
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 639.1
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 637.7
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 635.1
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 628.8
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 619.5
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 605.1
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 596.7
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 595.0
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 594.8
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 594.7
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 589.7
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 589.0
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 587.8
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 584.8
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 584.5
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 583.7
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 579.9
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 575.2
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 574.0
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 571.0
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 561.7
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 559.5
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 551.5
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 550.2
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 547.0
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 539.5
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 538.5
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 536.3
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 533.6
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 527.9
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 527.4
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 525.3
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 524.5
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 522.9
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 519.8
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 519.3
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 515.4
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 511.2
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 510.4
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 508.7
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 506.8
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 505.1
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 501.0
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 499.8
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 496.4
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 494.4
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 488.8
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 485.5
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 482.5
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 482.4
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 482.0
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 481.2
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 474.0
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 473.9
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 472.6
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 471.4
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 471.2
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 471.2
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 468.8
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 465.0
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 464.9
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 460.2
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 454.5
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 454.3
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 443.2
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 443.1
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 441.9
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 436.1
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 434.1
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 433.2
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 431.8
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 431.7
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 427.9
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 424.7
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 422.9
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 421.3
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 421.2
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 420.5
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 415.9
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 404.6
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 401.9
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 398.9
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 396.3
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 393.6
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 389.9
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 387.8
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 386.5
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 385.5
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 385.3
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 383.1
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 381.9
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 379.3
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 370.2
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 365.6
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 358.3
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 358.2
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 349.9
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 345.3
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 345.3
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 343.6
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 332.7
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 325.3
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 322.0
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 317.2
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 311.2
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 308.1
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 306.4
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 291.4
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 290.9
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 290.5
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 287.2
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 285.0
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 280.9
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 256.6
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 255.3
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 253.9
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 253.2
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 249.0
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 240.8
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 235.8
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 235.4
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 234.9
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 231.6
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 231.3
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 228.6
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 228.4
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 227.1
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 226.8
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 222.6
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 220.6
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 218.9
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 211.5
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 208.3
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 204.2
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 199.3
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 197.0
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 185.6
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 184.6
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 182.6
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 173.1
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 170.6
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 166.9
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 166.0
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 151.8
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 145.1
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 141.7
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 140.9
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 125.9
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 123.2
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 123.1
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 120.5
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 108.9
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 103.0
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 91.1
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 84.6
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 80.3
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 72.1
Show allShow less
Brain - Cerebellum
Average nTPM: 632.2
Samples: 241

Max nTPM: 2751.1
Min nTPM: 100.6
Std nTPM: 312.4
Median nTPM: 584.1
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 2751.1
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 1926.7
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 1673.1
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 1491.8
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 1291.8
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 1264.1
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 1231.1
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 1183.6
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 1154.4
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 1143.3
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 1131.6
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 1117.8
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 1081.7
GTEX-RU72-2926-SM-2TF66 50-59 years, female 1078.9
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 1064.3
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 1054.7
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 1042.9
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 1042.8
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 1039.4
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 1030.7
GTEX-11ONC-3026-SM-5985W 60-69 years, male 1027.4
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 1026.9
GTEX-144GL-2926-SM-5O99F 50-59 years, male 1021.0
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 997.3
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 997.1
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 989.5
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 988.4
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 964.3
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 962.3
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 958.8
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 951.5
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 943.5
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 933.9
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 922.7
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 920.7
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 916.9
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 906.5
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 903.8
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 899.6
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 897.9
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 893.7
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 892.1
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 886.8
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 881.3
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 879.1
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 862.2
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 857.7
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 850.4
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 847.4
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 844.9
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 834.2
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 822.8
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 822.6
GTEX-13112-2926-SM-5DUWT 50-59 years, male 817.6
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 815.4
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 807.1
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 806.5
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 805.9
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 802.0
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 797.8
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 794.2
GTEX-X261-3126-SM-4PQZC 50-59 years, male 788.4
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 786.4
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 784.0
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 775.5
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 774.4
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 771.1
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 768.9
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 766.0
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 765.2
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 761.5
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 757.5
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 748.1
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 745.8
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 743.6
GTEX-11EI6-2926-SM-5985U 60-69 years, male 741.9
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 736.2
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 723.8
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 723.8
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 723.8
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 721.9
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 721.8
GTEX-17HII-2926-SM-79OMK 50-59 years, male 719.2
GTEX-11NUK-3026-SM-5986K 50-59 years, male 711.4
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 711.3
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 709.8
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 708.0
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 707.0
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 704.1
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 691.3
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 690.4
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 682.9
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 681.3
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 678.3
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 674.3
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 673.7
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 672.4
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 668.1
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 666.5
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 653.3
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 650.5
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 647.9
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 646.9
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 646.6
GTEX-12126-0926-SM-5FQTW 20-29 years, male 646.1
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 643.1
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 642.1
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 637.5
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 634.3
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 634.0
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 632.3
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 622.8
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 618.8
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 614.6
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 603.2
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 598.5
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 591.3
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 589.5
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 586.4
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 584.4
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 584.1
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 580.6
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 577.9
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 577.6
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 574.7
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 574.2
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 569.7
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 569.5
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 563.9
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 557.5
GTEX-1192X-3226-SM-5987D 50-59 years, male 555.4
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 552.2
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 550.8
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 547.9
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 542.5
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 540.3
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 539.2
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 538.8
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 537.6
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 536.7
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 533.2
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 530.8
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 529.5
GTEX-18465-2926-SM-7KFSE 50-59 years, male 529.0
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 527.9
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 526.9
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 523.1
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 521.4
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 510.0
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 507.2
GTEX-14E6D-2926-SM-664OP 50-59 years, male 506.2
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 503.5
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 501.0
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 497.2
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 497.0
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 490.7
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 488.8
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 486.3
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 485.0
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 484.8
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 478.4
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 477.8
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 477.7
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 476.6
GTEX-14PN4-3026-SM-664O4 50-59 years, male 475.7
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 467.2
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 466.9
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 466.2
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 463.5
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 460.5
GTEX-15G19-2826-SM-6M48K 60-69 years, male 458.1
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 457.9
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 456.7
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 455.7
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 454.5
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 445.6
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 445.0
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 444.0
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 443.2
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 441.5
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 439.5
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 436.6
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 432.2
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 427.6
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 420.5
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 417.2
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 416.3
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 414.4
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 413.6
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 409.3
GTEX-17EVP-2926-SM-793BU 40-49 years, male 400.0
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 388.6
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 386.0
GTEX-11DYG-2926-SM-5H132 60-69 years, male 380.5
GTEX-145LS-3026-SM-5O99S 60-69 years, female 380.0
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 377.8
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 377.7
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 377.1
GTEX-14ABY-3026-SM-664NE 50-59 years, male 376.6
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 367.6
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 363.1
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 356.9
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 356.6
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 354.7
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 353.1
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 350.8
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 349.9
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 348.9
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 344.0
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 340.3
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 335.4
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 333.3
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 332.6
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 321.0
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 305.0
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 289.3
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 284.9
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 281.2
GTEX-1B933-3026-SM-731DB 50-59 years, female 274.2
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 272.0
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 257.8
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 251.6
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 249.9
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 247.3
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 245.7
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 222.6
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 209.7
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 198.9
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 196.4
GTEX-WL46-2826-SM-3LK81 50-59 years, male 183.6
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 177.3
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 174.8
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 172.3
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 168.4
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 156.1
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 155.7
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 150.9
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 150.4
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 147.1
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 133.2
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 100.6
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 865.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 865.6
FF:10083-102B2 22-68 years, mixed 1057.0
FF:10166-103B4 76 years, female 674.2

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 186.9
Pig sample Sample description nTPM
Cerebellum
nTPM: 186.9
Samples: 4

Max nTPM: 265.2
Min nTPM: 134.4
Sample A Female 265.2
Sample B Female 174.3
Sample C Male 134.4
Sample D Male 173.8

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 540.0
Mouse sample Sample description nTPM
Cerebellum
nTPM: 540.1
Samples: 4

Max nTPM: 680.3
Min nTPM: 380.3
Sample A Male 680.3
Sample B Male 626.3
Sample C Female 473.4
Sample D Female 380.3

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 20.4
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 20.4
67936406 Antisense, RP_040604_02_C10, Mouse strain C57BL/6J (56 days, male) 22.4
77620395 Antisense, RP_070205_01_F04, Mouse strain C57BL/6J (56 days, male) 18.3
79490110 Antisense, RP_070205_01_F04, Mouse strain C57BL/6J (56 days, male) 16.1

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