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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:5407.4 nTPM
HPA:5407.4 nTPM
GTEx:3076.6 nTPM
FANTOM5:4482.6 Scaled Tags Per Million
Pig:1237.8 nTPM
Mouse:168.4 nTPM
Allen mouse:2.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA056030Antibody HPA063513Antibody CAB000039
Glial cells MediumLowMedium
Neuronal cells Not detectedNot detectedNot detected







BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 5407.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 3489.8
2289 Male, age 61, right hemisphere 4247.5
2481 Female, age 94, left hemisphere 3914.6
1857 Female, age 85, left hemisphere 3682.1
1854 Male, age 80, left hemisphere 3614.8
2288 Male, age 75, left hemisphere 3337.9
1781 Male, age 74, unknown 3184.3
2290 Female, age 72, unknown 2985.0
2846 Female, age 79, unknown 2951.8
Claustrum
nTPM: 3330.0
2392 Female, age 94, both hemispheres 4134.4
2198 Male, age 80, both hemispheres 3391.7
2491 Male, age 75, both hemispheres 3364.6
2284 Female, age 91, both hemispheres 3340.2
1956 Male, age 74, unknown 3328.6
2645 Female, age 72, unknown 3230.0
2196 Female, age 79, unknown 3139.5
2292 Female, age 85, both hemispheres 3023.8
2568 Male, age 61, both hemispheres 3017.1
Globus pallidus, externus
nTPM: 5407.4
1996 Male, age 80, right hemisphere 6954.1
2646 Male, age 61, right hemisphere 5849.2
2772 Female, age 79, unknown 5250.6
2567 Female, age 72, unknown 4774.4
2395 Male, age 75, both hemispheres 4208.9
Globus pallidus, internus
nTPM: 5061.3
2037 Male, age 80, right hemisphere 6258.7
2111 Female, age 85, right hemisphere 5522.5
1818 Male, age 74, unknown 5386.5
2483 Female, age 94, right hemisphere 5158.3
2566 Female, age 72, unknown 4862.8
2778 Female, age 91, both hemispheres 4616.9
2287 Male, age 75, right hemisphere 3623.6
Nucleus accumbens
nTPM: 3244.8
2732 Male, age 80, right hemisphere 3979.2
2391 Female, age 94, left hemisphere 3734.9
1806 Female, age 85, left hemisphere 3543.7
2698 Female, age 72, unknown 3449.9
2286 Male, age 75, left hemisphere 3246.1
1856 Female, age 91, right hemisphere 2865.2
1783 Male, age 74, unknown 2629.5
2824 Male, age 61, right hemisphere 2509.7
Nucleus basalis of Meynert
nTPM: 4530.1
2569 Male, age 61, both hemispheres 6434.9
2393 Male, age 80, right hemisphere 4857.9
2484 Female, age 94, left hemisphere 3789.7
2821 Male, age 75, both hemispheres 3037.9
Nucleus of the diagonal band
nTPM: 3617.4
1812 Female, age 91, both hemispheres 4325.0
1979 Male, age 74, unknown 4048.7
2029 Male, age 61, right hemisphere 3581.4
2775 Male, age 80, right hemisphere 3538.8
2195 Female, age 85, both hemispheres 2593.4
Olfactory tubercle
nTPM: 3612.5
1846 Male, age 80, right hemisphere 4414.8
2856 Male, age 75, right hemisphere 3803.4
2487 Female, age 94, left hemisphere 3607.9
1998 Female, age 91, both hemispheres 2624.1
Putamen
nTPM: 3565.1
2647 Male, age 75, left hemisphere 4371.9
2489 Female, age 72, unknown 4337.3
1829 Male, age 74, unknown 3906.1
2482 Female, age 94, left hemisphere 3868.7
1937 Female, age 91, right hemisphere 2885.4
2466 Female, age 79, unknown 2803.7
1838 Male, age 80, right hemisphere 2782.2
Septal nuclei
nTPM: 4251.5
2199 Male, age 80, right hemisphere 6591.3
2394 Male, age 61, left hemisphere 5394.1
2629 Female, age 94, right hemisphere 4505.7
2009 Female, age 91, both hemispheres 4018.8
2059 Female, age 85, both hemispheres 3941.5
1960 Male, age 74, unknown 2690.9
2031 Female, age 72, unknown 2618.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 3076.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 3076.6
Samples: 246

Max nTPM: 12445.1
Min nTPM: 104.1
Std nTPM: 2116.8
Median nTPM: 2462.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 12445.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 10839.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 10227.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 9946.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 9076.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 8783.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 8757.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 8102.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 7884.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 7675.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 7481.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 7470.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 7387.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 7211.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 7134.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 7120.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 6998.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 6926.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 6917.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 6820.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 6747.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 6708.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 6701.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 6323.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 6069.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 5930.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 5613.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 5579.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 5514.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 5490.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 5434.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 5361.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 5292.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 5269.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 5268.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 5256.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 5235.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 5185.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 5175.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 5137.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 5119.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 5115.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 4975.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 4958.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 4868.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 4837.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 4835.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 4788.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 4751.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 4655.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 4577.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 4544.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 4508.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 4396.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 4383.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 4291.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 4253.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 4214.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 4126.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 4120.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 4112.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 3967.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 3914.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 3883.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 3841.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 3803.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 3724.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 3655.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 3602.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 3572.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 3571.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 3555.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 3523.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 3489.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 3426.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 3424.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 3403.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 3346.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 3345.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 3334.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 3333.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 3265.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 3222.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 3140.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 3130.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 3088.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 3057.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 3053.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 3043.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 3040.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 3014.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 3012.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 2998.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 2944.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 2926.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 2909.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 2885.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 2864.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 2845.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 2843.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 2837.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 2814.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 2772.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 2770.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 2756.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 2754.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 2754.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 2716.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 2710.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 2692.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 2669.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 2663.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 2647.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 2640.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 2629.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 2609.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 2579.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 2576.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 2519.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 2508.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 2506.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 2503.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 2467.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 2456.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 2451.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 2445.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 2440.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 2421.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 2406.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 2369.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 2316.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 2314.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 2280.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 2273.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2270.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 2264.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 2256.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 2244.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 2244.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 2244.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 2235.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 2231.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 2180.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 2179.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 2170.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 2162.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 2075.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 2066.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 2053.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 2033.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 1979.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 1960.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1943.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 1941.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1931.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 1912.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 1904.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 1873.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 1869.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 1867.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1865.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 1845.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1843.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 1823.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 1803.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1802.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1801.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 1794.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 1757.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 1731.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 1728.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 1724.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1723.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1701.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1689.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1684.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1666.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 1664.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1661.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1661.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 1656.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1645.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 1636.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1634.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1628.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1626.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 1593.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1582.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 1576.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1556.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 1554.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 1533.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 1525.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1498.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 1495.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 1455.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1453.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 1436.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1426.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 1422.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 1420.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 1417.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1407.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 1400.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 1398.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 1397.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1390.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1325.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 1309.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 1306.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1272.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1246.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1246.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 1200.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1196.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1147.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 1145.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1133.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 1101.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 1091.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 1062.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 1051.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1041.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 1040.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 983.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 957.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 945.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 944.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 917.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 911.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 905.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 875.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 828.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 817.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 802.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 789.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 788.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 713.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 676.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 666.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 595.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 528.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 443.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 385.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 300.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 104.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 2004.8
Samples: 246

Max nTPM: 9476.6
Min nTPM: 126.2
Std nTPM: 1645.1
Median nTPM: 1473.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 9476.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 8080.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 7947.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 7868.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 7517.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 7218.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 7191.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 6463.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 6374.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 6315.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 6114.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 5773.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 5548.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 5219.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 5187.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 5054.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 5051.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 4911.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 4678.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 4631.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 4516.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 4411.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 4409.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 4354.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 4262.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 4075.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 3934.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 3889.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 3815.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 3646.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 3592.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 3591.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 3482.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 3473.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 3450.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 3450.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 3306.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 3262.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 3210.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 3189.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 3174.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 3162.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 3129.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 3116.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 3100.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 3079.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 3065.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 3038.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 2927.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 2918.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 2839.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 2803.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 2771.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 2730.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 2710.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 2693.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 2681.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 2585.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 2574.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 2549.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 2524.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 2518.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 2509.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 2508.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 2484.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 2455.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 2439.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 2407.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 2352.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 2352.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 2327.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 2315.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 2279.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 2260.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 2257.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 2248.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 2243.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 2241.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 2239.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 2211.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 2211.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 2202.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 2136.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 2123.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 2097.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 2092.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 2088.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 2088.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 2035.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 2032.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 2030.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 2026.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 2019.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 2011.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 1974.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 1907.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 1877.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 1876.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 1842.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 1840.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 1821.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 1806.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 1804.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 1753.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 1728.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 1691.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 1668.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 1635.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 1632.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 1608.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 1591.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 1568.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 1549.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 1534.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 1519.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 1518.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 1512.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 1510.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 1509.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 1500.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 1481.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 1481.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 1474.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 1472.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 1457.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 1447.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 1416.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 1406.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1395.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 1386.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 1374.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 1359.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 1356.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 1355.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 1354.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 1345.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 1331.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 1313.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 1300.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 1268.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 1250.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 1247.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 1241.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 1225.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 1179.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 1174.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 1173.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 1168.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 1166.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 1161.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 1158.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 1154.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 1147.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 1131.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 1130.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 1128.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 1126.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 1095.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 1088.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1084.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 1082.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 1081.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 1080.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 1072.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 1068.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 1066.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 1063.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 1059.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 1055.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 1040.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 1023.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 1014.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 978.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 967.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 958.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 958.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 948.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 947.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 947.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 945.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 930.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 927.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 919.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 911.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 905.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 899.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 896.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 888.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 883.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 877.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 874.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 871.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 866.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 861.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 858.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 836.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 823.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 819.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 816.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 809.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 802.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 785.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 777.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 773.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 756.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 746.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 741.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 726.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 692.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 680.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 674.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 670.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 666.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 651.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 642.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 625.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 617.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 615.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 578.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 572.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 570.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 565.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 562.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 557.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 553.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 548.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 532.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 528.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 521.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 505.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 476.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 473.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 447.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 439.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 433.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 408.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 398.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 390.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 352.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 345.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 245.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 235.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 215.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 175.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 163.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 126.2
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Brain - Putamen (basal ganglia)
Average nTPM: 2428.5
Samples: 205

Max nTPM: 12551.9
Min nTPM: 78.1
Std nTPM: 1862.9
Median nTPM: 1986.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 12551.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 10183.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 9560.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 7543.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 7185.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 7061.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 6716.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 6671.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 6573.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 6378.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 6318.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 5792.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 5621.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 5574.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 5520.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 5336.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 5296.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 5054.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 4870.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 4834.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 4785.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 4749.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 4691.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 4688.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 4581.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 4486.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 4409.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 4373.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 4336.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 4291.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 4279.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 4154.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 4028.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 3988.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 3950.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 3880.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 3877.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 3745.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 3582.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 3536.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 3467.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 3388.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 3334.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 3313.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 3302.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 3227.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 3197.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 3138.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 3136.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 3089.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 3039.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 2984.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 2974.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 2902.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 2848.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 2835.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 2819.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 2804.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 2779.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 2756.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 2734.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 2732.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 2728.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 2717.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 2710.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 2626.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 2618.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 2584.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 2576.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 2503.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 2482.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 2472.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 2436.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 2430.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 2430.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 2409.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 2391.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 2389.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 2387.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 2327.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 2319.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 2312.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 2296.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 2244.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 2238.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 2172.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 2164.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 2148.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 2141.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 2137.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 2130.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 2128.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 2122.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 2114.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 2098.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 2084.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 2069.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 2054.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 2053.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 2039.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 2014.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 2005.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 1986.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 1902.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 1883.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 1867.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 1859.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 1853.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 1849.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1839.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 1812.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 1810.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 1805.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1800.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1790.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 1781.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 1744.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 1719.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 1699.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 1694.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 1672.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1639.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 1637.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 1626.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1624.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 1618.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 1546.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 1510.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1507.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 1502.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 1479.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 1466.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1452.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 1442.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1442.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 1422.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1420.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 1384.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 1375.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 1367.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 1366.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1365.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 1345.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 1339.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 1319.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 1317.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 1313.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1293.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 1293.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 1282.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 1269.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 1260.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 1258.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 1244.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 1197.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 1196.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1187.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 1177.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1129.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 1091.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1083.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 1061.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 1025.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 1006.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 994.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 989.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 973.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 965.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 961.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 942.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 931.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 904.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 900.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 864.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 864.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 862.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 855.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 795.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 771.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 755.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 728.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 714.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 710.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 707.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 706.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 705.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 700.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 690.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 657.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 641.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 608.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 567.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 564.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 548.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 531.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 509.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 500.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 462.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 422.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 361.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 286.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 280.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 218.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 165.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 78.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 4482.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 2470.9
FF:10164-103B2 76 years, female 2470.9
Globus pallidus
Scaled Tags Per Million: 4482.6
FF:10161-103A8 76 years, female 6076.1
FF:10175-103C4 60 years, female 2889.0
Nucleus accumbens
Scaled Tags Per Million: 1696.2
FF:10037-101F1 23-56 years, mixed 1696.2
Putamen
Scaled Tags Per Million: 1489.0
FF:10176-103C5 60 years, female 1489.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 1237.8
Pig sample Sample description nTPM
Caudate
nTPM: 686.2
Samples: 4

Max nTPM: 805.4
Min nTPM: 591.9
Sample A Female 682.4
Sample B Female 665.2
Sample C Male 805.4
Sample D Male 591.9
Putamen
nTPM: 810.8
Samples: 4

Max nTPM: 1370.8
Min nTPM: 593.6
Sample A Female 1370.8
Sample B Female 593.6
Sample C Male 602.0
Sample D Male 676.9
Septum
nTPM: 1237.8
Samples: 4

Max nTPM: 1873.1
Min nTPM: 648.5
Sample A Female 648.5
Sample B Female 1125.2
Sample C Male 1873.1
Sample D Male 1304.3
Ventral pallidum
nTPM: 916.9
Samples: 4

Max nTPM: 1384.6
Min nTPM: 463.9
Sample A Female 463.9
Sample B Female 1100.3
Sample C Male 1384.6
Sample D Male 718.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 168.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 71.6
Samples: 4

Max nTPM: 80.9
Min nTPM: 64.8
Sample A Male 69.7
Sample B Male 70.9
Sample C Female 80.9
Sample D Female 64.8
Septum
nTPM: 168.4
Samples: 4

Max nTPM: 195.4
Min nTPM: 117.2
Sample A Male 117.2
Sample B Male 180.2
Sample C Female 195.4
Sample D Female 180.9
Ventral forebrain
nTPM: 136.4
Samples: 4

Max nTPM: 142.8
Min nTPM: 125.4
Sample A Male 135.3
Sample B Male 142.8
Sample C Female 142.0
Sample D Female 125.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.5
1358 Antisense, RP_Baylor_253913, Mouse strain C57BL/6J (56 days, male) 2.0
1357 Antisense, RP_Baylor_253913, Mouse strain C57BL/6J (56 days, male) 1.3
79591671 Antisense, RP_071204_04_G06, Mouse strain C57BL/6J (56 days, male) 1.1
79913385 Antisense, RP_071204_04_G06, Mouse strain C57BL/6J (56 days, male) 0.8
Pallidum
Expression energy: 2.2
1357 Antisense, RP_Baylor_253913, Mouse strain C57BL/6J (56 days, male) 2.6
1358 Antisense, RP_Baylor_253913, Mouse strain C57BL/6J (56 days, male) 2.0
79591671 Antisense, RP_071204_04_G06, Mouse strain C57BL/6J (56 days, male) 1.8
79913385 Antisense, RP_071204_04_G06, Mouse strain C57BL/6J (56 days, male) 0.5

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