PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:218.6 nTPM
HPA:218.6 nTPM
FANTOM5:350.9 Scaled Tags Per Million
Pig:427.8 nTPM
Mouse:528.2 nTPM
Allen mouse:1.8 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 218.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 182.6
2188 Female, age 91, both hemispheres 205.3
2090 Male, age 80, both hemispheres 178.5
1984 Male, age 76, both hemispheres 173.9
2301 Female, age 85, both hemispheres 172.6
Area postrema
nTPM: 180.3
2306 Male, age 80, both hemispheres 183.9
2799 Male, age 61, both hemispheres 180.6
2054 Male, age 76, both hemispheres 176.5
Cuneate nuclei
nTPM: 180.3
2376 Male, age 61, both hemispheres 186.4
2381 Male, age 80, both hemispheres 180.7
2131 Male, age 76, both hemispheres 173.7
Dorsal cochlear nucleus
nTPM: 184.9
2802 Male, age 74, right hemisphere 206.8
2187 Female, age 91, both hemispheres 188.0
2378 Male, age 80, both hemispheres 184.9
2058 Male, age 76, both hemispheres 172.6
2370 Male, age 61, both hemispheres 172.5
Dorsal medullary reticular nucleus
nTPM: 192.2
2040 Female, age 85, both hemispheres 232.6
2373 Male, age 61, both hemispheres 180.5
2088 Male, age 76, both hemispheres 163.6
Dorsal motor vagal complex
nTPM: 179.9
2133 Female, age 91, both hemispheres 199.2
2000 Male, age 74, unknown 194.6
2844 Male, age 55, unknown 189.6
2813 Female, age 72, unknown 177.9
2643 Male, age 74, both hemispheres 177.3
2797 Male, age 61, both hemispheres 177.2
2185 Male, age 76, both hemispheres 168.3
2807 Female, age 85, both hemispheres 155.4
Dorsal tegmental nucleus
nTPM: 181.9
2083 Male, age 80, both hemispheres 199.3
2326 Male, age 74, both hemispheres 198.4
1936 Male, age 76, left hemisphere 170.7
2358 Male, age 61, both hemispheres 159.3
Dorsolateral tegmental area
nTPM: 185.2
2751 Female, age 85, both hemispheres 206.1
2654 Male, age 80, both hemispheres 200.1
2360 Male, age 74, both hemispheres 180.4
2141 Male, age 76, both hemispheres 170.0
2337 Male, age 61, both hemispheres 169.5
Gigantocellular reticular nuclei, medullary
nTPM: 197.9
2387 Female, age 91, both hemispheres 210.1
2314 Male, age 61, both hemispheres 208.9
1876 Female, age 85, both hemispheres 203.6
2022 Male, age 76, right hemisphere 191.2
2462 Male, age 74, both hemispheres 189.9
2310 Male, age 80, both hemispheres 183.8
Gigantocellular reticular nuclei, pars
nTPM: 180.0
2336 Male, age 61, both hemispheres 188.2
2084 Female, age 85, both hemispheres 184.8
2168 Male, age 76, both hemispheres 182.1
2706 Male, age 80, both hemispheres 173.0
2330 Male, age 80, both hemispheres 171.8
Inferior olive
nTPM: 218.6
2085 Female, age 85, both hemispheres 282.4
2563 Male, age 74, both hemispheres 232.5
2178 Male, age 61, both hemispheres 200.8
2379 Male, age 80, both hemispheres 195.0
2628 Female, age 91, both hemispheres 182.5
Kolliker-Fuse nucleus
nTPM: 191.4
2793 Female, age 91, left hemisphere 214.3
2163 Male, age 80, both hemispheres 188.1
2315 Male, age 76, right hemisphere 171.7
Lateral lemniscal nuclei
nTPM: 196.0
2320 Female, age 91, left hemisphere 202.2
2453 Male, age 74, right hemisphere 200.1
2036 Male, age 80, both hemispheres 194.6
2746 Female, age 85, left hemisphere 192.5
2169 Male, age 76, both hemispheres 190.6
Lateral medullary reticular nucleus
nTPM: 201.8
2305 Male, age 74, both hemispheres 217.5
2190 Female, age 85, both hemispheres 212.9
2044 Male, age 76, both hemispheres 206.9
2374 Male, age 61, both hemispheres 204.6
2852 Male, age 80, both hemispheres 185.4
2804 Female, age 91, both hemispheres 183.4
Lateral parabrachial nucleus
nTPM: 193.3
2792 Male, age 76, both hemispheres 205.4
2013 Male, age 80, both hemispheres 195.3
2790 Male, age 61, both hemispheres 189.5
2139 Female, age 85, right hemisphere 183.0
Lateral vestibular nucleus
nTPM: 175.9
2184 Male, age 76, both hemispheres 179.9
2311 Male, age 80, both hemispheres 171.9
Locus coeruleus
nTPM: 212.4
2014 Male, age 55, unknown 224.9
1980 Male, age 76, both hemispheres 217.5
2123 Female, age 91, both hemispheres 216.2
2788 Male, age 74, unknown 215.6
2720 Male, age 74, both hemispheres 214.7
2317 Female, age 72, unknown 201.4
2162 Male, age 80, both hemispheres 196.3
Medial olivary nucleus
nTPM: 190.2
1943 Male, age 61, both hemispheres 202.8
2138 Female, age 91, both hemispheres 188.5
1962 Male, age 76, both hemispheres 185.9
2851 Male, age 80, both hemispheres 183.4
Medial parabrachial nucleus
nTPM: 188.9
2463 Female, age 85, right hemisphere 199.4
2170 Female, age 91, both hemispheres 197.3
2854 Male, age 80, both hemispheres 190.8
2156 Male, age 61, both hemispheres 179.3
2786 Male, age 76, both hemispheres 177.7
Medial periolivary nuclei
nTPM: 193.7
2791 Male, age 74, right hemisphere 206.8
2063 Male, age 76, both hemispheres 195.4
2081 Male, age 80, both hemispheres 193.0
2458 Female, age 91, both hemispheres 187.2
2171 Female, age 85, both hemispheres 186.1
Medial vestibular nucleus
nTPM: 192.1
2803 Female, age 91, both hemispheres 212.7
2801 Male, age 74, both hemispheres 201.4
2093 Male, age 80, both hemispheres 189.7
2743 Female, age 85, both hemispheres 186.2
2134 Male, age 76, both hemispheres 183.4
2624 Male, age 61, both hemispheres 179.5
Motor facial nucleus
nTPM: 190.7
2365 Male, age 74, right hemisphere 208.9
2062 Male, age 76, both hemispheres 192.9
2697 Female, age 85, both hemispheres 190.7
2126 Male, age 61, both hemispheres 190.0
2795 Female, age 91, both hemispheres 184.6
2327 Male, age 80, both hemispheres 176.9
Motor hypoglossal nucleus
nTPM: 186.0
2125 Female, age 91, both hemispheres 202.8
2132 Female, age 85, both hemispheres 195.6
2461 Male, age 61, both hemispheres 182.8
2182 Male, age 80, both hemispheres 175.9
2277 Male, age 76, both hemispheres 172.7
Motor trigeminal nucleus
nTPM: 180.7
2560 Male, age 74, both hemispheres 208.2
2079 Male, age 80, both hemispheres 180.3
2321 Female, age 91, both hemispheres 173.8
2309 Male, age 76, both hemispheres 172.6
2335 Male, age 61, both hemispheres 168.7
Nuclei of the trapezoid body
nTPM: 194.1
2159 Male, age 61, both hemispheres 212.6
1983 Male, age 76, both hemispheres 194.3
2166 Male, age 80, both hemispheres 190.6
2368 Female, age 91, both hemispheres 187.6
2735 Female, age 85, both hemispheres 185.2
Nucleus ambiguus
nTPM: 198.6
2071 Male, age 76, both hemispheres 203.2
2096 Female, age 85, both hemispheres 194.0
Nucleus cuneatus
nTPM: 179.1
2564 Male, age 74, both hemispheres 200.0
2380 Male, age 80, both hemispheres 190.2
2562 Male, age 61, both hemispheres 188.8
2808 Female, age 85, both hemispheres 170.7
2100 Male, age 76, both hemispheres 165.1
2805 Female, age 91, both hemispheres 159.6
Nucleus gracilis
nTPM: 187.3
2627 Male, age 74, both hemispheres 200.0
2382 Male, age 80, both hemispheres 197.6
2299 Female, age 85, both hemispheres 164.2
Nucleus raphe magnus
nTPM: 200.1
2459 Female, age 91, both hemispheres 208.5
2051 Male, age 76, both hemispheres 205.8
2455 Male, age 74, both hemispheres 204.3
2160 Male, age 61, both hemispheres 203.5
2328 Male, age 80, both hemispheres 194.3
2172 Female, age 85, both hemispheres 184.3
Nucleus raphe obscurus
nTPM: 213.5
2845 Female, age 85, midline 242.4
2800 Male, age 61, midline 223.2
2142 Male, age 76, midline 174.9
Nucleus raphe pallidus
nTPM: 197.7
1924 Male, age 61, midline 214.6
2183 Male, age 80, midline 200.5
2145 Male, age 76, midline 177.8
Nucleus tractus solitarii
nTPM: 174.7
2144 Female, age 91, right hemisphere 188.8
2656 Male, age 76, both hemispheres 187.7
2191 Female, age 85, both hemispheres 162.1
2307 Male, age 80, both hemispheres 160.2
Paramedian reticular nucleus
nTPM: 201.9
2050 Female, age 85, both hemispheres 209.8
2313 Male, age 61, both hemispheres 201.3
2057 Male, age 80, both hemispheres 201.1
2052 Male, age 76, both hemispheres 195.5
Parvicellular reticular nuclei
nTPM: 188.4
2119 Male, age 80, both hemispheres 194.1
2558 Male, age 74, both hemispheres 193.3
2095 Male, age 76, both hemispheres 177.9
Parvicellular reticular nuclei, medullary
nTPM: 190.0
2189 Female, age 91, both hemispheres 197.6
2091 Female, age 85, both hemispheres 190.1
2181 Male, age 80, left hemisphere 182.4
Peritrigeminal nucleus
nTPM: 186.5
2179 Male, age 61, both hemispheres 190.2
2067 Female, age 85, both hemispheres 186.7
2136 Male, age 76, both hemispheres 182.8
Pontine nuclei
nTPM: 212.0
2454 Male, age 74, left hemisphere 250.8
2727 Male, age 61, right hemisphere 220.9
2109 Female, age 72, unknown 218.4
1863 Male, age 55, unknown 212.4
2319 Female, age 91, both hemispheres 208.0
2787 Female, age 85, both hemispheres 205.5
1968 Male, age 76, left hemisphere 196.9
2115 Male, age 80, left hemisphere 182.9
Pontine raphe nucleus
nTPM: 195.5
2122 Female, age 85, midline 196.1
2853 Male, age 76, midline 194.8
Posteroventral cochlear nucleus
nTPM: 192.8
2341 Male, age 80, both hemispheres 204.6
2135 Female, age 91, both hemispheres 204.4
2752 Female, age 85, both hemispheres 191.2
2070 Male, age 76, both hemispheres 187.9
2371 Male, age 61, both hemispheres 175.7
Prepositus hypoglossal nucleus
nTPM: 182.5
2855 Female, age 85, right hemisphere 193.7
2086 Male, age 80, both hemispheres 171.3
Principal sensory trigeminal nucleus
nTPM: 187.3
2367 Female, age 91, left hemisphere 198.0
2158 Male, age 61, both hemispheres 193.4
2008 Male, age 80, left hemisphere 186.8
2324 Male, age 76, both hemispheres 171.1
Reticular pontine nucleus, caudal
nTPM: 201.7
2457 Female, age 91, both hemispheres 216.5
2559 Male, age 74, both hemispheres 210.8
2092 Male, age 76, both hemispheres 194.9
2332 Male, age 80, right hemisphere 184.5
Reticular pontine nucleus, oral
nTPM: 208.0
2361 Male, age 74, both hemispheres 231.7
2012 Female, age 85, both hemispheres 208.3
2366 Female, age 91, both hemispheres 206.8
1939 Male, age 80, both hemispheres 205.3
2167 Male, age 76, both hemispheres 187.8
Reticulotegmental nucleus
nTPM: 188.2
2452 Male, age 74, both hemispheres 199.3
2322 Female, age 91, both hemispheres 193.6
2333 Male, age 80, both hemispheres 186.0
2325 Male, age 76, both hemispheres 173.7
Spinal trigeminal nucleus, caudal
nTPM: 186.3
2390 Female, age 91, both hemispheres 202.9
2447 Male, age 76, both hemispheres 185.4
2312 Male, age 61, both hemispheres 184.7
2308 Male, age 80, both hemispheres 181.7
2642 Male, age 74, both hemispheres 176.6
Spinal trigeminal nucleus, interpolar
nTPM: 194.4
2033 Male, age 80, both hemispheres 203.7
2389 Female, age 91, both hemispheres 197.8
2625 Male, age 61, both hemispheres 195.4
2386 Female, age 85, both hemispheres 192.2
2066 Male, age 76, right hemisphere 182.9
Spinal trigeminal nucleus, oral
nTPM: 186.0
2737 Female, age 85, both hemispheres 190.6
2164 Male, age 80, both hemispheres 186.9
1978 Male, age 76, both hemispheres 180.7
Spinal vestibular nucleus
nTPM: 191.1
2384 Male, age 74, both hemispheres 202.4
2186 Female, age 91, both hemispheres 196.9
2806 Female, age 85, both hemispheres 196.4
2748 Male, age 76, both hemispheres 190.1
2780 Male, age 80, both hemispheres 189.9
2796 Male, age 61, both hemispheres 170.7
Subcoeruleus area
nTPM: 191.7
2369 Female, age 85, left hemisphere 216.7
1958 Male, age 80, both hemispheres 195.2
2323 Female, age 91, left hemisphere 188.4
2451 Male, age 74, both hemispheres 186.0
2089 Male, age 76, left hemisphere 172.3
Superior olive
nTPM: 198.9
2364 Male, age 74, right hemisphere 212.4
2020 Male, age 76, both hemispheres 206.6
1875 Female, age 85, both hemispheres 203.0
2329 Male, age 80, right hemisphere 187.0
2561 Female, age 91, both hemispheres 185.6
Superior vestibular nucleus
nTPM: 184.3
2383 Male, age 74, both hemispheres 195.3
2015 Male, age 80, both hemispheres 187.1
2061 Male, age 76, both hemispheres 170.4
Ventral medullary reticular nucleus
nTPM: 199.9
2372 Male, age 61, both hemispheres 219.6
2060 Male, age 76, both hemispheres 180.2
Ventral periolivary nuclei
nTPM: 186.1
2023 Male, age 76, both hemispheres 212.4
2165 Male, age 80, both hemispheres 191.1
2130 Female, age 85, both hemispheres 172.5
2794 Female, age 91, left hemisphere 168.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 194.8
2180 Male, age 61, both hemispheres 206.5
2118 Male, age 80, both hemispheres 198.8
2741 Female, age 85, both hemispheres 195.4
1986 Male, age 76, both hemispheres 186.9
2302 Female, age 91, both hemispheres 186.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 195.6
2449 Male, age 74, both hemispheres 203.5
2840 Female, age 85, both hemispheres 202.9
2456 Female, age 91, both hemispheres 197.1
1959 Male, age 76, both hemispheres 195.8
2161 Male, age 80, both hemispheres 187.3
2359 Male, age 61, both hemispheres 187.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 350.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 283.8
FF:10165-103B3 76 years, female 284.4
FF:10182-103D2 60 years, female 283.2
Medulla oblongata
Scaled Tags Per Million: 243.9
FF:10038-101F2 18-64 years, mixed 302.8
FF:10155-103A2 76 years, female 233.8
FF:10174-103C3 60 years, female 195.3
Pons
Scaled Tags Per Million: 350.9
FF:10033-101E6 18-54 years, mixed 350.9

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 427.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 427.9
Samples: 4

Max nTPM: 534.7
Min nTPM: 336.5
Sample A Female 422.7
Sample B Female 336.5
Sample C Male 417.5
Sample D Male 534.7
Pons
nTPM: 384.6
Samples: 4

Max nTPM: 432.8
Min nTPM: 304.0
Sample A Female 391.4
Sample B Female 304.0
Sample C Male 410.2
Sample D Male 432.8

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 528.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 528.2
Samples: 4

Max nTPM: 557.2
Min nTPM: 501.8
Sample A Male 511.7
Sample B Male 501.8
Sample C Female 541.9
Sample D Female 557.2

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.8
1131 Antisense, RP_Baylor_103129, Mouse strain C57BL/6J (56 days, male) 6.8
1130 Antisense, RP_Baylor_103129, Mouse strain C57BL/6J (56 days, male) 5.2
70566163 Antisense, RP_050628_02_D11, Mouse strain C57BL/6J (56 days, male) 0.3
73931419 Antisense, RP_051214_04_E11, Mouse strain C57BL/6J (56 days, male) 0.0
1132 Sense, RPS_Baylor_37069, Mouse strain C57BL/6J (56 days, male) 0.0
Pons
Expression energy: 1.4
1130 Antisense, RP_Baylor_103129, Mouse strain C57BL/6J (56 days, male) 5.7
1131 Antisense, RP_Baylor_103129, Mouse strain C57BL/6J (56 days, male) 5.6
73931419 Antisense, RP_051214_04_E11, Mouse strain C57BL/6J (56 days, male) 0.0
70566163 Antisense, RP_050628_02_D11, Mouse strain C57BL/6J (56 days, male) 0.0
1132 Sense, RPS_Baylor_37069, Mouse strain C57BL/6J (56 days, male) 0.0

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