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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:402.2 nTPM
GTEx:402.2 nTPM
FANTOM5:1082.4 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA029292Antibody HPA071992
Squamous epithelial cells MediumMedium



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 402.2
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 402.2
Samples: 156

Max nTPM: 704.4
Min nTPM: 190.4
Std nTPM: 98.6
Median nTPM: 398.3
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 704.4
GTEX-11I78-2026-SM-5987C 50-59 years, female 675.8
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 625.6
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 612.9
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 601.2
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 595.0
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 592.9
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 589.6
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 568.6
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 561.2
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 557.4
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 555.0
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 548.5
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 546.4
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 545.5
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 543.4
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 543.0
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 534.9
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 534.5
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 516.2
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 508.1
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 504.0
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 501.2
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 495.8
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 488.4
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 488.2
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 486.5
GTEX-S341-1226-SM-4AD5S 40-49 years, female 485.6
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 482.6
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 481.9
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 479.5
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 478.9
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 478.3
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 477.8
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 476.5
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 474.4
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 472.9
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 471.7
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 471.0
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 471.0
GTEX-QCQG-1226-SM-48U23 50-59 years, female 470.1
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 467.5
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 464.9
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 464.0
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 460.2
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 454.8
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 453.4
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 453.0
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 449.9
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 448.9
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 448.1
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 447.5
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 445.4
GTEX-14PKU-1326-SM-6871B 40-49 years, female 441.4
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 440.7
GTEX-1C475-0526-SM-793AC 40-49 years, female 439.4
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 436.7
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 430.5
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 430.4
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 426.3
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 424.6
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 424.5
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 423.2
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 422.1
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 420.4
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 417.6
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 417.3
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 415.7
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 414.3
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 411.5
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 405.9
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 404.9
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 403.0
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 402.5
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 401.1
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 400.2
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 399.9
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 399.5
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 397.0
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 396.4
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 393.0
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 391.3
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 390.2
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 388.8
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 386.1
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 381.9
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 379.7
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 379.7
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 377.2
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 374.2
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 368.2
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 366.7
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 365.0
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 364.8
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 364.7
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 362.9
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 361.9
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 359.8
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 359.3
GTEX-16NPV-2526-SM-6M483 50-59 years, female 358.8
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 358.6
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 354.5
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 352.2
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 349.8
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 349.5
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 347.0
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 346.7
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 343.1
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 342.5
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 339.6
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 337.9
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 337.3
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 337.2
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 336.5
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 335.2
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 331.7
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 331.1
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 330.2
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 327.0
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 325.5
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 324.2
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 317.0
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 316.8
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 315.8
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 313.3
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 310.4
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 309.8
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 305.3
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 305.2
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 304.4
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 303.5
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 302.4
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 301.4
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 298.1
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 294.1
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 293.3
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 291.8
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 289.1
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 287.7
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 284.3
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 277.3
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 270.9
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 270.2
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 268.7
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 258.6
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 254.1
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 253.8
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 253.0
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 251.5
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 251.3
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 251.1
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 250.2
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 240.6
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 234.7
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 215.8
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 190.4
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1082.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 1082.4
FF:10204-103F6 68 years, female 1082.4

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.