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RPS11
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  • RPS11
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:1424.4 nTPM
FANTOM5:226.4 Scaled Tags Per Million
Pig:359.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA049719
Glial cells Not detected
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1424.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 1424.4
Samples: 246

Max nTPM: 3301.7
Min nTPM: 598.0
Std nTPM: 383.0
Median nTPM: 1347.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 3301.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 2770.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 2756.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 2577.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 2495.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 2478.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 2422.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 2374.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 2359.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 2215.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 2188.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 2164.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 2163.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 2138.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 2049.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 2027.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 2011.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1978.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1970.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1950.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1949.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1941.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1918.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1914.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1910.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1898.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1883.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1872.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1872.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1839.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1830.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1813.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1812.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1805.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1798.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1782.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1768.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1767.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1764.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1747.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1740.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1738.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1734.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1718.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1714.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1713.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1711.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1706.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1700.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1693.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1684.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1678.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1676.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1671.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1659.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1649.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1647.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1644.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1633.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 1617.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1596.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1589.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1578.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1570.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1567.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1566.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1563.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1560.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1555.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 1553.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1550.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1530.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1524.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1519.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1517.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1514.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1510.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1509.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1509.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 1509.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1504.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 1502.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 1501.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 1499.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1498.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1496.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 1487.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 1487.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1481.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 1480.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 1478.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 1460.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 1457.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 1457.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 1455.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 1450.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 1449.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 1448.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 1440.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 1437.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 1434.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 1431.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 1412.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 1410.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 1410.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 1406.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1397.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 1396.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1395.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 1393.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 1388.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 1380.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1379.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 1377.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 1373.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1372.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 1365.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 1356.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 1355.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 1353.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 1352.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 1351.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 1348.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 1347.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 1346.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 1345.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 1344.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1344.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 1341.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 1341.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 1335.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 1334.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 1334.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 1333.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 1332.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 1330.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 1330.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 1329.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 1326.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 1323.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 1321.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 1319.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 1316.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 1315.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 1314.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 1314.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 1308.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1308.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1301.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 1297.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1290.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1288.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 1280.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 1280.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 1270.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 1262.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 1258.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 1256.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 1253.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1251.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 1250.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 1247.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 1247.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 1246.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1245.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 1243.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 1242.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1238.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 1236.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 1236.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 1227.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 1225.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 1221.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 1220.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 1219.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 1216.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 1212.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 1209.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 1206.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 1200.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 1189.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 1189.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 1183.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 1175.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 1166.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 1163.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 1160.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 1152.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 1151.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 1145.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 1143.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 1136.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 1132.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 1132.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 1130.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 1129.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 1127.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 1127.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 1123.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 1115.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 1111.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 1105.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 1104.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1100.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 1100.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 1098.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 1095.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 1080.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 1078.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1058.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 1056.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 1051.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 1048.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 1045.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1039.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 1030.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 1027.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 1027.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 1025.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1024.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 1023.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1007.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 1004.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 992.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 991.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 990.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 983.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 979.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 970.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 960.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 959.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 947.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 931.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 911.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 906.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 899.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 896.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 896.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 886.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 884.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 883.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 866.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 824.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 806.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 746.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 598.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 226.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 226.4
FF:10164-103B2 76 years, female 226.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 359.8
Pig sample Sample description nTPM
Caudate
nTPM: 359.8
Samples: 4

Max nTPM: 403.7
Min nTPM: 304.3
Sample A Female 360.7
Sample B Female 370.4
Sample C Male 403.7
Sample D Male 304.3

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