HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:321.9 nTPM
HPA:321.9 nTPM
GTEx:310.8 nTPM
FANTOM5:198.5 Scaled Tags Per Million
Pig:180.6 nTPM
Mouse:876.1 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058978Antibody HPA060520
Glial cells HighMedium
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 321.9
Sample id Sample description nTPM
Hippocampus
nTPM: 301.5
1898 Male, age 80, left hemisphere 324.1
2621 Female, age 67, right hemisphere 302.3
2529 Female, age 94, left hemisphere 302.2
1855 Male, age 76, left hemisphere 297.7
1911 Female, age 85, right hemisphere 294.0
2148 Female, age 91, left hemisphere 289.1
Dentate gyrus
nTPM: 301.2
1927 Female, age 91, both hemispheres 315.2
2010 Male, age 76, both hemispheres 310.3
2246 Female, age 85, both hemispheres 298.8
2530 Female, age 94, left hemisphere 296.9
2528 Male, age 74, both hemispheres 294.4
2531 Female, age 67, both hemispheres 291.7
Entorhinal gyrus
nTPM: 299.1
2764 Male, age 80, right hemisphere 308.9
1938 Female, age 85, left hemisphere 307.1
1787 Male, age 76, left hemisphere 304.6
2613 Female, age 94, left hemisphere 294.0
2686 Male, age 75, right hemisphere 293.3
2117 Female, age 91, right hemisphere 286.6
Hippocampus, CA1
nTPM: 312.7
2749 Male, age 80, left hemisphere 360.5
2527 Male, age 74, both hemispheres 306.2
1873 Female, age 85, both hemispheres 305.2
2045 Male, age 76, both hemispheres 297.3
2082 Female, age 91, right hemisphere 294.4
Hippocampus, CA2
nTPM: 306.6
1963 Male, age 80, left hemisphere 326.5
1892 Male, age 76, both hemispheres 325.2
2249 Male, age 74, both hemispheres 304.4
2437 Female, age 94, left hemisphere 296.3
1940 Female, age 85, left hemisphere 294.7
2113 Female, age 91, right hemisphere 292.3
Hippocampus, CA3
nTPM: 305.3
2137 Male, age 80, left hemisphere 337.6
1867 Male, age 76, both hemispheres 316.1
2436 Male, age 74, both hemispheres 303.3
1891 Female, age 85, both hemispheres 297.3
2620 Female, age 94, left hemisphere 293.5
2861 Female, age 67, both hemispheres 283.8
Parahippocampal cortex
nTPM: 301.8
1850 Male, age 80, both hemispheres 327.1
1990 Female, age 91, right hemisphere 306.5
2250 Female, age 67, right hemisphere 306.1
2018 Male, age 76, both hemispheres 304.7
1933 Female, age 85, both hemispheres 303.4
2245 Female, age 91, both hemispheres 301.1
2693 Female, age 94, both hemispheres 297.1
2532 Female, age 72, left hemisphere 295.0
2692 Male, age 74, both hemispheres 289.0
2622 Female, age 67, right hemisphere 287.9
Perirhinal gyrus
nTPM: 321.9
1794 Male, age 80, right hemisphere 337.3
1847 Female, age 91, left hemisphere 336.0
1841 Female, age 85, right hemisphere 326.7
2848 Male, age 76, right hemisphere 305.5
2521 Female, age 94, right hemisphere 304.1
Subiculum
nTPM: 297.3
1901 Male, age 80, both hemispheres 306.6
1977 Female, age 85, both hemispheres 303.1
2438 Female, age 94, left hemisphere 298.3
2042 Male, age 76, both hemispheres 294.8
2619 Male, age 74, both hemispheres 293.3
2729 Female, age 91, right hemisphere 287.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 310.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 310.8
Samples: 197

Max nTPM: 1043.8
Min nTPM: 113.2
Std nTPM: 130.8
Median nTPM: 292.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1043.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 749.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 693.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 688.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 669.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 664.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 618.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 597.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 581.3
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 568.7
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 523.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 198.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 198.5
FF:10169-103B7 60 years, female 267.8
FF:10153-102I9 76 years, female 129.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 180.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 180.7
Samples: 4

Max nTPM: 266.8
Min nTPM: 132.5
Sample A Female 266.8
Sample B Female 173.2
Sample C Male 150.2
Sample D Male 132.5
Entorhinal cortex
nTPM: 144.3
Samples: 4

Max nTPM: 203.1
Min nTPM: 106.1
Sample A Female 141.2
Sample B Female 203.1
Sample C Male 126.6
Sample D Male 106.1
Subiculum
nTPM: 124.2
Samples: 4

Max nTPM: 163.0
Min nTPM: 91.9
Sample A Female 163.0
Sample B Female 129.5
Sample C Male 91.9
Sample D Male 112.4
Ventral hippocampus
nTPM: 137.5
Samples: 4

Max nTPM: 178.4
Min nTPM: 113.7
Sample A Female 178.4
Sample B Female 113.7
Sample C Male 127.5
Sample D Male 130.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 876.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 801.4
Samples: 4

Max nTPM: 872.5
Min nTPM: 749.7
Sample A Male 749.7
Sample B Male 798.2
Sample C Female 872.5
Sample D Female 785.3
Hippocampal formation
nTPM: 876.1
Samples: 4

Max nTPM: 1014.3
Min nTPM: 775.0
Sample A Male 1014.3
Sample B Male 775.0
Sample C Female 882.0
Sample D Female 833.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
69116709 Antisense, RP_050321_01_A05, Mouse strain C57BL/6J (56 days, male) 3.1

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