HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:221.0 nTPM
HPA:221.0 nTPM
GTEx:209.1 nTPM
FANTOM5:33.7 Scaled Tags Per Million
Pig:97.8 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 221.0
Sample id Sample description nTPM
Hippocampus
nTPM: 212.3
1898 Male, age 80, left hemisphere 229.4
2621 Female, age 67, right hemisphere 216.0
1855 Male, age 76, left hemisphere 210.7
1911 Female, age 85, right hemisphere 209.8
2148 Female, age 91, left hemisphere 204.2
2529 Female, age 94, left hemisphere 203.8
Dentate gyrus
nTPM: 213.7
1927 Female, age 91, both hemispheres 225.0
2530 Female, age 94, left hemisphere 217.7
2010 Male, age 76, both hemispheres 217.4
2246 Female, age 85, both hemispheres 210.8
2531 Female, age 67, both hemispheres 206.2
2528 Male, age 74, both hemispheres 205.2
Entorhinal gyrus
nTPM: 208.6
2764 Male, age 80, right hemisphere 214.9
1938 Female, age 85, left hemisphere 213.3
1787 Male, age 76, left hemisphere 211.7
2613 Female, age 94, left hemisphere 210.8
2117 Female, age 91, right hemisphere 201.1
2686 Male, age 75, right hemisphere 199.6
Hippocampus, CA1
nTPM: 221.0
2749 Male, age 80, left hemisphere 253.1
2045 Male, age 76, both hemispheres 216.8
2527 Male, age 74, both hemispheres 216.3
1873 Female, age 85, both hemispheres 215.5
2082 Female, age 91, right hemisphere 203.0
Hippocampus, CA2
nTPM: 216.8
1892 Male, age 76, both hemispheres 233.7
1963 Male, age 80, left hemisphere 222.4
2249 Male, age 74, both hemispheres 221.1
2437 Female, age 94, left hemisphere 215.7
1940 Female, age 85, left hemisphere 205.7
2113 Female, age 91, right hemisphere 202.0
Hippocampus, CA3
nTPM: 218.6
2436 Male, age 74, both hemispheres 236.6
2137 Male, age 80, left hemisphere 222.7
1867 Male, age 76, both hemispheres 222.1
2620 Female, age 94, left hemisphere 217.4
1891 Female, age 85, both hemispheres 213.0
2861 Female, age 67, both hemispheres 200.1
Parahippocampal cortex
nTPM: 210.1
1850 Male, age 80, both hemispheres 219.9
1933 Female, age 85, both hemispheres 217.9
2245 Female, age 91, both hemispheres 211.6
1990 Female, age 91, right hemisphere 211.5
2018 Male, age 76, both hemispheres 210.9
2250 Female, age 67, right hemisphere 210.4
2693 Female, age 94, both hemispheres 209.5
2532 Female, age 72, left hemisphere 206.8
2622 Female, age 67, right hemisphere 205.7
2692 Male, age 74, both hemispheres 196.4
Perirhinal gyrus
nTPM: 217.3
1847 Female, age 91, left hemisphere 231.5
1841 Female, age 85, right hemisphere 220.2
1794 Male, age 80, right hemisphere 218.2
2848 Male, age 76, right hemisphere 209.2
2521 Female, age 94, right hemisphere 207.2
Subiculum
nTPM: 210.8
1901 Male, age 80, both hemispheres 225.3
1977 Female, age 85, both hemispheres 217.2
2042 Male, age 76, both hemispheres 211.2
2619 Male, age 74, both hemispheres 209.3
2438 Female, age 94, left hemisphere 205.0
2729 Female, age 91, right hemisphere 196.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 209.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 209.1
Samples: 197

Max nTPM: 513.9
Min nTPM: 80.4
Std nTPM: 87.5
Median nTPM: 199.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 513.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 509.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 475.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 473.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 447.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 429.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 428.5
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 391.8
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 390.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 381.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 375.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.7
FF:10169-103B7 60 years, female 42.9
FF:10153-102I9 76 years, female 24.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 97.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 97.9
Samples: 4

Max nTPM: 127.8
Min nTPM: 73.2
Sample A Female 127.8
Sample B Female 86.8
Sample C Male 103.6
Sample D Male 73.2
Entorhinal cortex
nTPM: 88.1
Samples: 4

Max nTPM: 102.2
Min nTPM: 77.4
Sample A Female 92.1
Sample B Female 102.2
Sample C Male 80.8
Sample D Male 77.4
Subiculum
nTPM: 77.7
Samples: 4

Max nTPM: 101.8
Min nTPM: 65.9
Sample A Female 101.8
Sample B Female 65.9
Sample C Male 75.8
Sample D Male 67.3
Ventral hippocampus
nTPM: 93.4
Samples: 4

Max nTPM: 118.6
Min nTPM: 53.3
Sample A Female 103.7
Sample B Female 53.3
Sample C Male 118.6
Sample D Male 98.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.