We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
S100B
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • S100B
BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

Read more
82.569
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:877.1 nTPM
HPA:877.1 nTPM
GTEx:1025.2 nTPM
FANTOM5:284.9 Scaled Tags Per Million

AMYGDALA - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

Read more
, antibody CAB000073
Amygdala mean intensity 82.569
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

Read more
FRONT BACK
Nucleus of the lateral olfactory tract 51.174
Basal medial amygdaloid nucleus 82.569
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 75.738
Cortical amygdala 81.353
Central amygdala 57.003
Medial amygdaloid nucleus 74.615

AMYGDALA - HPA Brain RNA-seq
Max nTPM 877.1
Sample id Sample description nTPM
Amygdala
nTPM: 877.1
2695 Female, age 67, right hemisphere 949.9
2814 Male, age 76, right hemisphere 922.2
1987 Female, age 91, left hemisphere 874.8
2514 Male, age 75, right hemisphere 845.7
2517 Female, age 94, left hemisphere 793.0
Basal amygdala
nTPM: 787.8
2609 Male, age 75, right hemisphere 831.0
1955 Male, age 76, both hemispheres 818.2
2110 Male, age 80, left hemisphere 774.7
2243 Female, age 91, right hemisphere 772.5
2685 Female, age 94, left hemisphere 771.7
2827 Female, age 67, right hemisphere 759.0
Central amygdala
nTPM: 812.2
1905 Male, age 76, both hemispheres 861.3
2515 Male, age 75, right hemisphere 817.7
2701 Female, age 91, right hemisphere 804.5
2826 Female, age 94, left hemisphere 796.9
2239 Male, age 80, left hemisphere 780.5
Corticomedial amygdala
nTPM: 788.6
2428 Male, age 75, right hemisphere 832.1
2242 Female, age 91, right hemisphere 801.5
2240 Male, age 76, both hemispheres 796.9
2429 Female, age 94, left hemisphere 786.3
2829 Male, age 80, left hemisphere 767.1
2535 Female, age 67, right hemisphere 748.0
Lateral amygdala
nTPM: 809.8
1883 Male, age 76, both hemispheres 874.9
2516 Male, age 75, right hemisphere 825.5
2256 Male, age 80, left hemisphere 812.9
2255 Female, age 91, right hemisphere 785.1
2830 Female, age 67, right hemisphere 783.9
2534 Female, age 94, left hemisphere 776.2
Stria terminalis, bed nucleus
nTPM: 766.7
2201 Male, age 74, unknown 790.3
1974 Female, age 91, both hemispheres 764.8
2486 Female, age 94, both hemispheres 745.0

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1025.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 1025.2
Samples: 152

Max nTPM: 4020.9
Min nTPM: 21.8
Std nTPM: 544.6
Median nTPM: 918.0
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 4020.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 3532.1
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 3120.1
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 2631.6
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 2578.9
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 2236.2
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 1883.8
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 1870.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 1841.7
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 1758.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 1753.4
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 1732.6
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 1602.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 1547.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 1527.2
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 1486.3
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 1480.6
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 1471.9
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 1446.7
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 1430.3
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 1407.4
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 1403.8
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 1396.6
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 1385.2
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 1370.7
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 1355.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 1349.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 1337.7
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 1321.1
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 1320.7
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 1302.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 1301.0
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 1280.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 1279.7
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 1262.2
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 1251.4
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 1251.0
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 1207.0
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 1205.7
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 1194.2
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 1188.9
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 1188.1
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 1176.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 1170.6
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 1160.4
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 1146.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 1134.9
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 1130.6
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 1124.5
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 1120.0
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 1118.6
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 1102.5
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 1094.5
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 1089.0
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 1084.1
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 1069.4
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 1067.6
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 1058.9
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 1043.1
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 1027.5
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 1019.5
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 1006.3
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 990.8
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 977.8
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 976.5
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 970.6
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 968.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 966.0
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 963.7
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 955.0
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 938.2
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 930.7
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 927.6
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 924.0
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 924.0
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 920.9
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 915.0
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 910.0
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 901.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 886.4
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 883.8
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 871.0
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 864.7
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 852.4
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 852.1
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 848.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 841.7
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 838.6
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 832.1
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 824.1
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 822.8
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 818.5
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 805.7
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 797.8
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 797.5
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 797.2
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 793.2
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 786.7
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 767.3
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 763.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 761.7
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 749.9
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 747.0
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 740.9
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 738.4
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 737.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 735.6
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 735.2
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 733.8
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 733.5
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 732.6
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 722.3
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 721.9
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 718.2
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 712.9
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 708.4
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 693.8
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 668.0
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 657.0
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 649.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 648.4
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 637.4
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 635.4
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 632.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 631.7
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 625.3
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 625.1
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 619.8
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 601.7
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 596.1
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 584.2
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 565.5
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 563.1
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 557.8
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 554.5
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 553.0
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 541.5
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 532.4
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 512.8
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 494.6
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 492.0
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 488.1
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 477.3
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 471.8
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 465.4
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 458.4
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 457.6
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 445.0
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 397.7
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 348.6
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 335.1
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 21.8
Show allShow less

AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 284.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 284.9
FF:10151-102I7 76 years, female 284.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.