We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
IFI27
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • IFI27
BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:203.8 nTPM
HPA:203.8 nTPM
FANTOM5:89.9 Scaled Tags Per Million

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 203.8
Sample id Sample description nTPM
Area postrema
nTPM: 195.6
2054 Male, age 76, both hemispheres 200.0
2306 Male, age 80, both hemispheres 197.8
2799 Male, age 61, both hemispheres 189.2
Cuneate nuclei
nTPM: 192.2
2381 Male, age 80, both hemispheres 199.6
2376 Male, age 61, both hemispheres 196.8
2131 Male, age 76, both hemispheres 180.0
Dorsal medullary reticular nucleus
nTPM: 182.2
2373 Male, age 61, both hemispheres 190.5
2088 Male, age 76, both hemispheres 179.1
2040 Female, age 85, both hemispheres 177.1
Dorsal motor vagal complex
nTPM: 203.8
2844 Male, age 55, unknown 252.6
2797 Male, age 61, both hemispheres 207.6
2000 Male, age 74, unknown 204.8
2807 Female, age 85, both hemispheres 203.3
2133 Female, age 91, both hemispheres 196.5
2185 Male, age 76, both hemispheres 195.8
2813 Female, age 72, unknown 190.4
2643 Male, age 74, both hemispheres 179.4
Gigantocellular reticular nuclei, medullary
nTPM: 184.1
2022 Male, age 76, right hemisphere 192.7
2314 Male, age 61, both hemispheres 186.7
2310 Male, age 80, both hemispheres 186.3
1876 Female, age 85, both hemispheres 184.9
2387 Female, age 91, both hemispheres 180.8
2462 Male, age 74, both hemispheres 173.4
Gigantocellular reticular nuclei, pars
nTPM: 180.8
2706 Male, age 80, both hemispheres 189.9
2330 Male, age 80, both hemispheres 187.4
2336 Male, age 61, both hemispheres 183.4
2084 Female, age 85, both hemispheres 174.7
2168 Male, age 76, both hemispheres 168.6
Inferior olive
nTPM: 185.5
2178 Male, age 61, both hemispheres 199.8
2379 Male, age 80, both hemispheres 186.5
2563 Male, age 74, both hemispheres 182.8
2085 Female, age 85, both hemispheres 180.0
2628 Female, age 91, both hemispheres 178.3
Lateral medullary reticular nucleus
nTPM: 176.5
2190 Female, age 85, both hemispheres 181.7
2044 Male, age 76, both hemispheres 180.3
2374 Male, age 61, both hemispheres 179.1
2804 Female, age 91, both hemispheres 178.9
2852 Male, age 80, both hemispheres 173.1
2305 Male, age 74, both hemispheres 165.6
Medial vestibular nucleus
nTPM: 185.8
2134 Male, age 76, both hemispheres 211.6
2743 Female, age 85, both hemispheres 184.6
2624 Male, age 61, both hemispheres 182.9
2093 Male, age 80, both hemispheres 182.5
2803 Female, age 91, both hemispheres 181.1
2801 Male, age 74, both hemispheres 172.2
Motor hypoglossal nucleus
nTPM: 188.1
2277 Male, age 76, both hemispheres 216.4
2132 Female, age 85, both hemispheres 187.5
2125 Female, age 91, both hemispheres 182.8
2182 Male, age 80, both hemispheres 177.2
2461 Male, age 61, both hemispheres 176.8
Nucleus ambiguus
nTPM: 196.7
2096 Female, age 85, both hemispheres 203.8
2071 Male, age 76, both hemispheres 189.5
Nucleus cuneatus
nTPM: 199.3
2562 Male, age 61, both hemispheres 206.3
2805 Female, age 91, both hemispheres 205.7
2564 Male, age 74, both hemispheres 204.5
2808 Female, age 85, both hemispheres 203.7
2380 Male, age 80, both hemispheres 192.9
2100 Male, age 76, both hemispheres 182.6
Nucleus gracilis
nTPM: 198.8
2299 Female, age 85, both hemispheres 221.7
2382 Male, age 80, both hemispheres 190.2
2627 Male, age 74, both hemispheres 184.5
Nucleus raphe magnus
nTPM: 179.8
2051 Male, age 76, both hemispheres 188.0
2459 Female, age 91, both hemispheres 181.6
2328 Male, age 80, both hemispheres 180.8
2455 Male, age 74, both hemispheres 178.5
2172 Female, age 85, both hemispheres 175.5
2160 Male, age 61, both hemispheres 174.2
Nucleus raphe obscurus
nTPM: 183.5
2800 Male, age 61, midline 186.0
2142 Male, age 76, midline 184.6
2845 Female, age 85, midline 179.8
Nucleus raphe pallidus
nTPM: 182.3
2145 Male, age 76, midline 185.4
1924 Male, age 61, midline 184.2
2183 Male, age 80, midline 177.4
Nucleus tractus solitarii
nTPM: 195.7
2191 Female, age 85, both hemispheres 214.7
2307 Male, age 80, both hemispheres 205.2
2656 Male, age 76, both hemispheres 184.4
2144 Female, age 91, right hemisphere 178.7
Parvicellular reticular nuclei
nTPM: 175.8
2119 Male, age 80, both hemispheres 178.0
2095 Male, age 76, both hemispheres 176.1
2558 Male, age 74, both hemispheres 173.4
Parvicellular reticular nuclei, medullary
nTPM: 199.9
2091 Female, age 85, both hemispheres 217.7
2181 Male, age 80, left hemisphere 199.6
2189 Female, age 91, both hemispheres 182.4
Peritrigeminal nucleus
nTPM: 187.9
2067 Female, age 85, both hemispheres 196.7
2136 Male, age 76, both hemispheres 187.9
2179 Male, age 61, both hemispheres 179.0
Prepositus hypoglossal nucleus
nTPM: 185.2
2086 Male, age 80, both hemispheres 188.2
2855 Female, age 85, right hemisphere 182.3
Spinal trigeminal nucleus, caudal
nTPM: 188.7
2308 Male, age 80, both hemispheres 200.1
2642 Male, age 74, both hemispheres 189.3
2312 Male, age 61, both hemispheres 188.9
2390 Female, age 91, both hemispheres 183.0
2447 Male, age 76, both hemispheres 182.1
Spinal trigeminal nucleus, interpolar
nTPM: 189.9
2386 Female, age 85, both hemispheres 208.4
2033 Male, age 80, both hemispheres 194.4
2625 Male, age 61, both hemispheres 185.0
2066 Male, age 76, right hemisphere 181.6
2389 Female, age 91, both hemispheres 180.2
Spinal vestibular nucleus
nTPM: 184.0
2796 Male, age 61, both hemispheres 190.3
2780 Male, age 80, both hemispheres 188.9
2384 Male, age 74, both hemispheres 186.3
2748 Male, age 76, both hemispheres 180.9
2806 Female, age 85, both hemispheres 180.5
2186 Female, age 91, both hemispheres 177.1
Ventral medullary reticular nucleus
nTPM: 185.5
2372 Male, age 61, both hemispheres 191.1
2060 Male, age 76, both hemispheres 179.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 185.4
2741 Female, age 85, both hemispheres 191.8
2180 Male, age 61, both hemispheres 187.6
1986 Male, age 76, both hemispheres 186.7
2118 Male, age 80, both hemispheres 181.5
2302 Female, age 91, both hemispheres 179.3

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 89.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 89.9
FF:10038-101F2 18-64 years, mixed 106.0
FF:10174-103C3 60 years, female 93.3
FF:10155-103A2 76 years, female 70.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.