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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:869.7 nTPM
FANTOM5:4294.0 Scaled Tags Per Million
Pig:879.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA001254Antibody CAB047313
Glial cells LowMedium
Neuronal cells Not detectedNot detected





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 869.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 869.7
Samples: 246

Max nTPM: 1864.6
Min nTPM: 263.6
Std nTPM: 279.0
Median nTPM: 873.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1864.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1611.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1531.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1503.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1455.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1444.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1443.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1433.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1418.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1411.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 1398.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1381.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1378.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 1362.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1335.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1321.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 1315.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1314.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1295.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1289.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 1280.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 1276.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1271.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1264.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 1253.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 1252.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1250.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 1248.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1247.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 1206.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1200.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 1193.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 1192.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1189.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1176.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 1169.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1164.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 1159.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1159.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 1146.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 1129.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 1123.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1118.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1107.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 1107.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 1094.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1091.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 1083.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 1082.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1081.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1075.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1074.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 1068.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1066.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 1060.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1059.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1059.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 1055.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1053.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 1042.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 1041.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1041.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 1039.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 1039.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 1037.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 1034.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 1022.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 1021.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 1020.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1018.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 1015.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1015.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1012.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 1012.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 1011.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 1011.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 1010.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 1005.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1003.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 991.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 988.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 983.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 980.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 980.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 971.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 970.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 968.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 962.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 960.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 956.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 956.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 954.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 953.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 953.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 949.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 948.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 946.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 942.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 941.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 940.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 936.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 933.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 930.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 929.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 927.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 926.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 926.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 922.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 920.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 914.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 906.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 904.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 900.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 894.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 892.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 891.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 890.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 890.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 890.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 888.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 883.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 880.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 875.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 872.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 870.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 859.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 851.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 847.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 844.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 836.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 834.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 829.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 826.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 818.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 817.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 816.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 813.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 811.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 807.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 800.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 794.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 788.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 787.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 787.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 782.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 778.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 775.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 774.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 763.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 761.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 760.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 760.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 756.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 755.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 751.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 751.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 739.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 735.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 731.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 730.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 726.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 721.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 720.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 717.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 710.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 700.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 698.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 697.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 696.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 687.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 687.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 686.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 680.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 679.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 673.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 673.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 672.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 672.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 671.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 667.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 665.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 662.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 660.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 659.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 659.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 659.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 658.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 657.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 651.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 649.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 639.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 635.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 635.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 628.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 628.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 625.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 618.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 618.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 615.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 605.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 604.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 602.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 593.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 592.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 583.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 583.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 582.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 582.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 580.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 580.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 574.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 571.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 568.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 562.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 560.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 551.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 546.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 545.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 544.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 544.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 543.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 540.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 539.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 515.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 512.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 504.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 499.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 487.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 485.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 466.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 452.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 450.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 448.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 444.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 442.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 441.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 441.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 433.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 425.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 419.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 392.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 355.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 347.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 338.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 281.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 263.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 4294.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 4294.0
FF:10164-103B2 76 years, female 4294.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 879.4
Pig sample Sample description nTPM
Caudate
nTPM: 879.4
Samples: 4

Max nTPM: 1147.3
Min nTPM: 642.1
Sample A Female 642.1
Sample B Female 929.0
Sample C Male 1147.3
Sample D Male 799.3

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