HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:384.9 nTPM
HPA:384.9 nTPM
GTEx:564.4 nTPM
FANTOM5:436.0 Scaled Tags Per Million
Pig:121.9 nTPM
Mouse:148.7 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006757
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 384.9
Sample id Sample description nTPM
Hippocampus
nTPM: 380.9
1911 Female, age 85, right hemisphere 404.7
1898 Male, age 80, left hemisphere 393.8
2529 Female, age 94, left hemisphere 388.4
2148 Female, age 91, left hemisphere 370.1
2621 Female, age 67, right hemisphere 365.4
1855 Male, age 76, left hemisphere 362.8
Dentate gyrus
nTPM: 357.5
2530 Female, age 94, left hemisphere 423.8
2528 Male, age 74, both hemispheres 420.5
2246 Female, age 85, both hemispheres 344.5
2010 Male, age 76, both hemispheres 322.8
2531 Female, age 67, both hemispheres 319.3
1927 Female, age 91, both hemispheres 314.3
Entorhinal gyrus
nTPM: 367.9
2117 Female, age 91, right hemisphere 465.2
2764 Male, age 80, right hemisphere 377.8
1938 Female, age 85, left hemisphere 350.5
1787 Male, age 76, left hemisphere 342.6
2686 Male, age 75, right hemisphere 342.6
2613 Female, age 94, left hemisphere 328.6
Hippocampus, CA1
nTPM: 344.2
2527 Male, age 74, both hemispheres 401.4
1873 Female, age 85, both hemispheres 383.6
2082 Female, age 91, right hemisphere 330.1
2749 Male, age 80, left hemisphere 303.3
2045 Male, age 76, both hemispheres 302.5
Hippocampus, CA2
nTPM: 356.4
2249 Male, age 74, both hemispheres 389.4
1963 Male, age 80, left hemisphere 385.8
1940 Female, age 85, left hemisphere 365.7
2437 Female, age 94, left hemisphere 364.9
2113 Female, age 91, right hemisphere 342.9
1892 Male, age 76, both hemispheres 289.6
Hippocampus, CA3
nTPM: 343.5
1891 Female, age 85, both hemispheres 397.5
2861 Female, age 67, both hemispheres 364.4
2620 Female, age 94, left hemisphere 340.8
2436 Male, age 74, both hemispheres 330.3
1867 Male, age 76, both hemispheres 325.3
2137 Male, age 80, left hemisphere 302.5
Parahippocampal cortex
nTPM: 335.4
2692 Male, age 74, both hemispheres 406.7
2622 Female, age 67, right hemisphere 352.6
1933 Female, age 85, both hemispheres 342.7
1990 Female, age 91, right hemisphere 333.0
2532 Female, age 72, left hemisphere 326.6
2018 Male, age 76, both hemispheres 326.1
1850 Male, age 80, both hemispheres 323.6
2245 Female, age 91, both hemispheres 321.0
2250 Female, age 67, right hemisphere 318.7
2693 Female, age 94, both hemispheres 303.0
Perirhinal gyrus
nTPM: 297.0
1794 Male, age 80, right hemisphere 327.1
1841 Female, age 85, right hemisphere 293.1
1847 Female, age 91, left hemisphere 292.7
2848 Male, age 76, right hemisphere 286.4
2521 Female, age 94, right hemisphere 285.8
Subiculum
nTPM: 384.9
2619 Male, age 74, both hemispheres 423.5
2042 Male, age 76, both hemispheres 412.3
1901 Male, age 80, both hemispheres 398.6
2729 Female, age 91, right hemisphere 389.4
1977 Female, age 85, both hemispheres 350.7
2438 Female, age 94, left hemisphere 335.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 564.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 564.4
Samples: 197

Max nTPM: 1261.6
Min nTPM: 160.9
Std nTPM: 202.3
Median nTPM: 559.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 1261.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1117.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1100.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 1017.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 1015.0
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 990.2
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 990.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 965.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 941.8
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 926.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 895.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 436.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 436.0
FF:10153-102I9 76 years, female 512.1
FF:10169-103B7 60 years, female 359.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 121.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 122.0
Samples: 4

Max nTPM: 162.9
Min nTPM: 75.8
Sample A Female 162.9
Sample B Female 98.9
Sample C Male 150.2
Sample D Male 75.8
Entorhinal cortex
nTPM: 89.5
Samples: 4

Max nTPM: 106.3
Min nTPM: 78.1
Sample A Female 78.1
Sample B Female 106.3
Sample C Male 95.2
Sample D Male 78.2
Subiculum
nTPM: 83.9
Samples: 4

Max nTPM: 104.9
Min nTPM: 71.8
Sample A Female 104.9
Sample B Female 85.6
Sample C Male 71.8
Sample D Male 73.1
Ventral hippocampus
nTPM: 101.9
Samples: 4

Max nTPM: 116.0
Min nTPM: 80.9
Sample A Female 102.9
Sample B Female 80.9
Sample C Male 116.0
Sample D Male 107.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 148.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 129.5
Samples: 4

Max nTPM: 145.7
Min nTPM: 109.3
Sample A Male 145.7
Sample B Male 131.6
Sample C Female 131.3
Sample D Female 109.3
Hippocampal formation
nTPM: 148.7
Samples: 4

Max nTPM: 170.9
Min nTPM: 126.9
Sample A Male 128.3
Sample B Male 126.9
Sample C Female 168.8
Sample D Female 170.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
1465 Antisense, RP_040420_01_D05, Mouse strain C57BL/6J (56 days, male) 5.0
1464 Antisense, RP_040420_01_D05, Mouse strain C57BL/6J (56 days, male) 2.2
74581363 Antisense, RP_060215_03_B02, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

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