HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:932.5 nTPM
HPA:932.5 nTPM
GTEx:740.1 nTPM
FANTOM5:234.8 Scaled Tags Per Million
Pig:23.5 nTPM
Mouse:490.4 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035010
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 932.5
Sample id Sample description nTPM
Hippocampus
nTPM: 931.8
1898 Male, age 80, left hemisphere 950.9
2529 Female, age 94, left hemisphere 945.3
2621 Female, age 67, right hemisphere 931.1
1855 Male, age 76, left hemisphere 927.4
1911 Female, age 85, right hemisphere 924.0
2148 Female, age 91, left hemisphere 912.1
Dentate gyrus
nTPM: 926.6
2530 Female, age 94, left hemisphere 989.9
2010 Male, age 76, both hemispheres 939.5
1927 Female, age 91, both hemispheres 921.2
2246 Female, age 85, both hemispheres 914.5
2531 Female, age 67, both hemispheres 905.7
2528 Male, age 74, both hemispheres 888.6
Entorhinal gyrus
nTPM: 925.2
2686 Male, age 75, right hemisphere 943.0
1787 Male, age 76, left hemisphere 927.6
2764 Male, age 80, right hemisphere 925.3
2117 Female, age 91, right hemisphere 924.7
1938 Female, age 85, left hemisphere 921.9
2613 Female, age 94, left hemisphere 908.7
Hippocampus, CA1
nTPM: 932.5
2749 Male, age 80, left hemisphere 963.6
1873 Female, age 85, both hemispheres 949.7
2527 Male, age 74, both hemispheres 941.1
2045 Male, age 76, both hemispheres 911.0
2082 Female, age 91, right hemisphere 896.9
Hippocampus, CA2
nTPM: 930.1
1892 Male, age 76, both hemispheres 965.0
1963 Male, age 80, left hemisphere 949.2
2437 Female, age 94, left hemisphere 939.7
1940 Female, age 85, left hemisphere 926.8
2249 Male, age 74, both hemispheres 903.4
2113 Female, age 91, right hemisphere 896.1
Hippocampus, CA3
nTPM: 915.1
2137 Male, age 80, left hemisphere 933.6
1891 Female, age 85, both hemispheres 931.5
1867 Male, age 76, both hemispheres 931.4
2436 Male, age 74, both hemispheres 903.4
2861 Female, age 67, both hemispheres 899.4
2620 Female, age 94, left hemisphere 891.2
Parahippocampal cortex
nTPM: 918.9
1850 Male, age 80, both hemispheres 936.8
2245 Female, age 91, both hemispheres 936.8
1933 Female, age 85, both hemispheres 936.3
2532 Female, age 72, left hemisphere 925.5
2018 Male, age 76, both hemispheres 922.8
2250 Female, age 67, right hemisphere 915.9
2692 Male, age 74, both hemispheres 915.9
1990 Female, age 91, right hemisphere 914.1
2622 Female, age 67, right hemisphere 896.7
2693 Female, age 94, both hemispheres 887.9
Perirhinal gyrus
nTPM: 916.8
1847 Female, age 91, left hemisphere 931.8
1794 Male, age 80, right hemisphere 926.7
1841 Female, age 85, right hemisphere 917.1
2848 Male, age 76, right hemisphere 908.4
2521 Female, age 94, right hemisphere 899.9
Subiculum
nTPM: 929.7
1901 Male, age 80, both hemispheres 966.3
2042 Male, age 76, both hemispheres 948.3
1977 Female, age 85, both hemispheres 930.5
2438 Female, age 94, left hemisphere 928.7
2619 Male, age 74, both hemispheres 917.5
2729 Female, age 91, right hemisphere 887.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 740.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 740.1
Samples: 197

Max nTPM: 1908.5
Min nTPM: 292.3
Std nTPM: 233.6
Median nTPM: 697.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1908.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1579.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1462.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1427.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1386.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 1378.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1290.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1260.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 1253.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1224.1
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 1198.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 234.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 234.8
FF:10169-103B7 60 years, female 309.7
FF:10153-102I9 76 years, female 160.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.7
Samples: 4

Max nTPM: 27.4
Min nTPM: 15.6
Sample A Female 27.4
Sample B Female 17.6
Sample C Male 26.2
Sample D Male 15.6
Entorhinal cortex
nTPM: 23.5
Samples: 4

Max nTPM: 27.9
Min nTPM: 19.5
Sample A Female 22.7
Sample B Female 27.9
Sample C Male 23.8
Sample D Male 19.5
Subiculum
nTPM: 20.5
Samples: 4

Max nTPM: 28.7
Min nTPM: 16.4
Sample A Female 28.7
Sample B Female 18.6
Sample C Male 16.4
Sample D Male 18.4
Ventral hippocampus
nTPM: 18.7
Samples: 4

Max nTPM: 20.7
Min nTPM: 14.9
Sample A Female 20.7
Sample B Female 14.9
Sample C Male 19.7
Sample D Male 19.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 490.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 457.0
Samples: 4

Max nTPM: 525.1
Min nTPM: 427.6
Sample A Male 431.4
Sample B Male 427.6
Sample C Female 525.1
Sample D Female 443.7
Hippocampal formation
nTPM: 490.4
Samples: 4

Max nTPM: 600.6
Min nTPM: 424.4
Sample A Male 600.6
Sample B Male 476.6
Sample C Female 424.4
Sample D Female 459.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
74426449 Antisense, RP_051121_02_B10, Mouse strain C57BL/6J (56 days, male) 2.2

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