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RPL38
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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1521.8 nTPM
HPA:1521.8 nTPM
FANTOM5:815.8 Scaled Tags Per Million
Pig:340.9 nTPM

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 1521.8
Sample id Sample description nTPM
Area postrema
nTPM: 1458.9
2306 Male, age 80, both hemispheres 1493.3
2799 Male, age 61, both hemispheres 1490.3
2054 Male, age 76, both hemispheres 1393.3
Cuneate nuclei
nTPM: 1443.5
2381 Male, age 80, both hemispheres 1483.4
2376 Male, age 61, both hemispheres 1451.4
2131 Male, age 76, both hemispheres 1395.9
Dorsal medullary reticular nucleus
nTPM: 1445.2
2373 Male, age 61, both hemispheres 1478.1
2040 Female, age 85, both hemispheres 1452.5
2088 Male, age 76, both hemispheres 1405.0
Dorsal motor vagal complex
nTPM: 1466.6
2797 Male, age 61, both hemispheres 1586.0
2643 Male, age 74, both hemispheres 1495.1
2807 Female, age 85, both hemispheres 1470.1
2813 Female, age 72, unknown 1445.4
2133 Female, age 91, both hemispheres 1443.6
2000 Male, age 74, unknown 1434.9
2844 Male, age 55, unknown 1428.8
2185 Male, age 76, both hemispheres 1428.5
Gigantocellular reticular nuclei, medullary
nTPM: 1469.4
2314 Male, age 61, both hemispheres 1555.0
1876 Female, age 85, both hemispheres 1488.9
2387 Female, age 91, both hemispheres 1471.7
2310 Male, age 80, both hemispheres 1457.2
2022 Male, age 76, right hemisphere 1432.4
2462 Male, age 74, both hemispheres 1411.0
Gigantocellular reticular nuclei, pars
nTPM: 1468.0
2168 Male, age 76, both hemispheres 1489.9
2336 Male, age 61, both hemispheres 1467.4
2084 Female, age 85, both hemispheres 1466.3
2706 Male, age 80, both hemispheres 1462.8
2330 Male, age 80, both hemispheres 1453.7
Inferior olive
nTPM: 1496.7
2628 Female, age 91, both hemispheres 1529.6
2178 Male, age 61, both hemispheres 1520.1
2563 Male, age 74, both hemispheres 1506.8
2085 Female, age 85, both hemispheres 1478.6
2379 Male, age 80, both hemispheres 1448.5
Lateral medullary reticular nucleus
nTPM: 1498.6
2374 Male, age 61, both hemispheres 1532.3
2852 Male, age 80, both hemispheres 1519.9
2190 Female, age 85, both hemispheres 1509.5
2804 Female, age 91, both hemispheres 1502.2
2305 Male, age 74, both hemispheres 1482.9
2044 Male, age 76, both hemispheres 1444.6
Medial vestibular nucleus
nTPM: 1484.8
2803 Female, age 91, both hemispheres 1558.5
2624 Male, age 61, both hemispheres 1539.0
2801 Male, age 74, both hemispheres 1502.6
2093 Male, age 80, both hemispheres 1463.1
2743 Female, age 85, both hemispheres 1436.7
2134 Male, age 76, both hemispheres 1408.9
Motor hypoglossal nucleus
nTPM: 1463.6
2132 Female, age 85, both hemispheres 1522.5
2182 Male, age 80, both hemispheres 1504.0
2125 Female, age 91, both hemispheres 1492.7
2461 Male, age 61, both hemispheres 1429.6
2277 Male, age 76, both hemispheres 1369.2
Nucleus ambiguus
nTPM: 1415.3
2071 Male, age 76, both hemispheres 1456.9
2096 Female, age 85, both hemispheres 1373.8
Nucleus cuneatus
nTPM: 1468.5
2808 Female, age 85, both hemispheres 1539.2
2805 Female, age 91, both hemispheres 1484.0
2380 Male, age 80, both hemispheres 1467.0
2562 Male, age 61, both hemispheres 1463.4
2564 Male, age 74, both hemispheres 1448.9
2100 Male, age 76, both hemispheres 1408.5
Nucleus gracilis
nTPM: 1498.0
2382 Male, age 80, both hemispheres 1514.8
2627 Male, age 74, both hemispheres 1512.8
2299 Female, age 85, both hemispheres 1466.4
Nucleus raphe magnus
nTPM: 1457.6
2455 Male, age 74, both hemispheres 1473.3
2328 Male, age 80, both hemispheres 1466.9
2051 Male, age 76, both hemispheres 1460.6
2172 Female, age 85, both hemispheres 1458.2
2459 Female, age 91, both hemispheres 1456.3
2160 Male, age 61, both hemispheres 1430.3
Nucleus raphe obscurus
nTPM: 1521.8
2845 Female, age 85, midline 1561.9
2800 Male, age 61, midline 1528.8
2142 Male, age 76, midline 1474.7
Nucleus raphe pallidus
nTPM: 1496.4
1924 Male, age 61, midline 1523.5
2183 Male, age 80, midline 1505.1
2145 Male, age 76, midline 1460.7
Nucleus tractus solitarii
nTPM: 1411.0
2191 Female, age 85, both hemispheres 1464.5
2307 Male, age 80, both hemispheres 1397.5
2656 Male, age 76, both hemispheres 1394.4
2144 Female, age 91, right hemisphere 1387.6
Parvicellular reticular nuclei
nTPM: 1474.0
2095 Male, age 76, both hemispheres 1503.9
2119 Male, age 80, both hemispheres 1474.3
2558 Male, age 74, both hemispheres 1443.7
Parvicellular reticular nuclei, medullary
nTPM: 1467.9
2189 Female, age 91, both hemispheres 1492.5
2181 Male, age 80, left hemisphere 1460.6
2091 Female, age 85, both hemispheres 1450.4
Peritrigeminal nucleus
nTPM: 1477.9
2067 Female, age 85, both hemispheres 1491.4
2136 Male, age 76, both hemispheres 1486.8
2179 Male, age 61, both hemispheres 1455.5
Prepositus hypoglossal nucleus
nTPM: 1474.0
2855 Female, age 85, right hemisphere 1515.0
2086 Male, age 80, both hemispheres 1432.9
Spinal trigeminal nucleus, caudal
nTPM: 1462.0
2312 Male, age 61, both hemispheres 1491.8
2390 Female, age 91, both hemispheres 1480.9
2308 Male, age 80, both hemispheres 1470.0
2642 Male, age 74, both hemispheres 1464.9
2447 Male, age 76, both hemispheres 1402.1
Spinal trigeminal nucleus, interpolar
nTPM: 1467.0
2389 Female, age 91, both hemispheres 1493.9
2625 Male, age 61, both hemispheres 1476.8
2033 Male, age 80, both hemispheres 1475.5
2066 Male, age 76, right hemisphere 1455.6
2386 Female, age 85, both hemispheres 1433.0
Spinal vestibular nucleus
nTPM: 1514.4
2806 Female, age 85, both hemispheres 1551.4
2796 Male, age 61, both hemispheres 1550.3
2384 Male, age 74, both hemispheres 1516.3
2748 Male, age 76, both hemispheres 1492.9
2186 Female, age 91, both hemispheres 1492.1
2780 Male, age 80, both hemispheres 1483.3
Ventral medullary reticular nucleus
nTPM: 1461.3
2372 Male, age 61, both hemispheres 1492.8
2060 Male, age 76, both hemispheres 1429.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 1479.2
2118 Male, age 80, both hemispheres 1503.2
2180 Male, age 61, both hemispheres 1498.8
2302 Female, age 91, both hemispheres 1483.5
1986 Male, age 76, both hemispheres 1463.2
2741 Female, age 85, both hemispheres 1447.2

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 815.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 815.8
FF:10174-103C3 60 years, female 1381.0
FF:10155-103A2 76 years, female 737.2
FF:10038-101F2 18-64 years, mixed 329.3

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 340.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 340.9
Samples: 4

Max nTPM: 387.3
Min nTPM: 269.8
Sample A Female 324.7
Sample B Female 269.8
Sample C Male 381.7
Sample D Male 387.3

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.