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RPL38
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BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1533.5 nTPM
HPA:1533.5 nTPM
GTEx:1915.4 nTPM
FANTOM5:1451.4 Scaled Tags Per Million
Pig:419.5 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 1533.5
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 1477.4
2565 Male, age 75, midline 1548.2
1981 Female, age 72, midline 1499.6
2048 Male, age 55, midline 1460.3
2816 Male, age 47, midline 1442.6
2194 Female, age 79, both hemispheres 1436.2
Cervical spinal cord, dorsal horn
nTPM: 1480.8
2296 Male, age 66, both hemispheres 1558.0
2173 Female, age 72, unknown 1555.8
2069 Male, age 47, both hemispheres 1503.5
1877 Male, age 55, unknown 1467.0
2721 Male, age 90, both hemispheres 1400.7
2297 Male, age 75, both hemispheres 1399.9
Cervical spinal cord, ventral horn
nTPM: 1533.5
2480 Male, age 75, both hemispheres 1679.7
2809 Male, age 90, both hemispheres 1616.0
2098 Female, age 72, unknown 1524.0
2068 Male, age 55, unknown 1506.1
2295 Male, age 66, both hemispheres 1442.1
2820 Female, age 79, both hemispheres 1433.2

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1915.4
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1915.4
Samples: 159

Max nTPM: 3661.9
Min nTPM: 603.1
Std nTPM: 630.9
Median nTPM: 1839.8
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 3661.9
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 3649.8
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 3561.8
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 3333.5
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 3157.8
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 3153.3
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 3130.6
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 3098.2
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 3089.8
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 3075.5
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 3068.6
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 2977.3
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 2968.5
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 2957.0
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 2949.9
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 2880.1
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 2845.7
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 2825.2
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 2788.6
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 2786.3
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 2773.9
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 2770.5
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 2684.7
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 2651.2
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 2625.6
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 2575.5
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 2570.0
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 2549.7
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 2510.8
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 2490.8
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 2427.9
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 2399.5
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 2397.1
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 2389.2
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 2380.3
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 2313.6
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 2301.3
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 2297.7
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 2289.8
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 2258.5
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 2257.2
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 2252.1
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 2237.5
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 2231.8
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 2229.5
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 2218.4
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 2216.9
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 2193.8
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 2192.0
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 2151.8
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 2102.8
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 2102.7
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 2093.0
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 2084.9
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 2082.4
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 2076.7
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 2061.6
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 2057.0
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 2026.8
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 2013.9
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 2009.3
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 2006.6
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 1967.3
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 1946.4
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 1941.5
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 1928.4
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1917.6
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 1914.8
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 1908.8
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1898.3
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1893.1
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 1892.9
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 1890.1
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 1866.8
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 1848.4
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 1846.0
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1842.5
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 1842.0
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1841.5
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 1839.8
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 1833.6
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1828.8
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 1812.9
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 1791.8
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 1784.1
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1782.9
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 1780.7
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 1777.4
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 1773.3
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 1770.4
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 1767.8
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 1761.6
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 1754.1
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 1752.3
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1726.9
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 1705.3
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 1704.4
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 1702.2
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1700.5
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 1683.0
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 1657.1
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 1640.7
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 1629.2
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 1579.6
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 1564.2
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 1543.3
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 1543.2
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 1542.5
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 1533.6
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 1532.2
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 1518.9
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 1515.3
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 1513.1
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 1512.3
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 1506.8
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 1474.6
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 1457.3
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 1453.8
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 1437.4
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 1435.9
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 1434.5
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 1415.5
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1390.0
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 1381.8
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 1368.7
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 1352.8
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 1344.9
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 1335.9
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 1323.8
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 1323.4
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 1321.5
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 1319.7
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 1317.0
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 1305.2
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 1304.1
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 1296.2
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 1287.9
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 1284.3
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1279.3
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 1276.7
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 1226.1
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 1209.7
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 1197.4
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 1192.6
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 1174.0
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 1138.5
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 1136.9
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 1135.0
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 1084.4
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 1063.0
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 1033.3
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 1023.3
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 949.8
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 930.4
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 930.0
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 888.6
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 859.7
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 783.7
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 603.1
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1451.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 1451.4
FF:10181-103D1 60 years, female 2217.2
FF:10159-103A6 76 years, female 685.6

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 419.5
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 419.5
Samples: 4

Max nTPM: 600.1
Min nTPM: 264.0
Sample A Female 358.1
Sample B Female 455.6
Sample C Male 600.1
Sample D Male 264.0
Ventral spinal cord
nTPM: 389.4
Samples: 4

Max nTPM: 441.4
Min nTPM: 323.6
Sample A Female 377.9
Sample B Female 414.7
Sample C Male 441.4
Sample D Male 323.6

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