HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:157.3 nTPM
HPA:157.3 nTPM
GTEx:135.2 nTPM
FANTOM5:70.9 Scaled Tags Per Million
Pig:79.5 nTPM
Mouse:30.4 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039901Antibody HPA040006
Glial cells Not detectedLow
Neuronal cells MediumLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 157.3
Sample id Sample description nTPM
Hippocampus
nTPM: 154.0
1898 Male, age 80, left hemisphere 159.8
2529 Female, age 94, left hemisphere 158.8
2621 Female, age 67, right hemisphere 153.2
1855 Male, age 76, left hemisphere 152.7
1911 Female, age 85, right hemisphere 150.4
2148 Female, age 91, left hemisphere 149.0
Dentate gyrus
nTPM: 152.4
2010 Male, age 76, both hemispheres 158.7
2530 Female, age 94, left hemisphere 157.3
1927 Female, age 91, both hemispheres 153.6
2246 Female, age 85, both hemispheres 150.1
2531 Female, age 67, both hemispheres 148.2
2528 Male, age 74, both hemispheres 146.8
Entorhinal gyrus
nTPM: 154.8
2764 Male, age 80, right hemisphere 161.1
1938 Female, age 85, left hemisphere 159.8
1787 Male, age 76, left hemisphere 157.1
2117 Female, age 91, right hemisphere 152.0
2686 Male, age 75, right hemisphere 151.5
2613 Female, age 94, left hemisphere 147.3
Hippocampus, CA1
nTPM: 154.6
2749 Male, age 80, left hemisphere 163.8
2045 Male, age 76, both hemispheres 154.3
1873 Female, age 85, both hemispheres 153.4
2082 Female, age 91, right hemisphere 151.5
2527 Male, age 74, both hemispheres 149.8
Hippocampus, CA2
nTPM: 156.2
1963 Male, age 80, left hemisphere 162.3
1892 Male, age 76, both hemispheres 161.0
2249 Male, age 74, both hemispheres 157.8
1940 Female, age 85, left hemisphere 153.3
2437 Female, age 94, left hemisphere 153.3
2113 Female, age 91, right hemisphere 149.5
Hippocampus, CA3
nTPM: 154.9
1867 Male, age 76, both hemispheres 161.9
2436 Male, age 74, both hemispheres 160.5
2137 Male, age 80, left hemisphere 155.3
1891 Female, age 85, both hemispheres 153.3
2620 Female, age 94, left hemisphere 149.4
2861 Female, age 67, both hemispheres 149.3
Parahippocampal cortex
nTPM: 154.1
1850 Male, age 80, both hemispheres 161.3
1933 Female, age 85, both hemispheres 158.7
2018 Male, age 76, both hemispheres 156.4
2532 Female, age 72, left hemisphere 156.2
1990 Female, age 91, right hemisphere 156.1
2245 Female, age 91, both hemispheres 156.1
2250 Female, age 67, right hemisphere 153.9
2692 Male, age 74, both hemispheres 150.7
2622 Female, age 67, right hemisphere 146.9
2693 Female, age 94, both hemispheres 144.9
Perirhinal gyrus
nTPM: 157.3
1847 Female, age 91, left hemisphere 163.2
1841 Female, age 85, right hemisphere 160.6
1794 Male, age 80, right hemisphere 158.5
2848 Male, age 76, right hemisphere 154.2
2521 Female, age 94, right hemisphere 149.9
Subiculum
nTPM: 153.5
1901 Male, age 80, both hemispheres 158.3
1977 Female, age 85, both hemispheres 157.5
2042 Male, age 76, both hemispheres 157.5
2619 Male, age 74, both hemispheres 152.1
2438 Female, age 94, left hemisphere 149.2
2729 Female, age 91, right hemisphere 146.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 135.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 135.2
Samples: 197

Max nTPM: 250.1
Min nTPM: 64.6
Std nTPM: 31.8
Median nTPM: 130.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 250.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 247.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 239.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 228.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 218.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 217.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 216.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 214.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 210.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 207.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 197.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.9
FF:10169-103B7 60 years, female 83.7
FF:10153-102I9 76 years, female 58.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 79.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 79.5
Samples: 4

Max nTPM: 114.9
Min nTPM: 57.8
Sample A Female 114.9
Sample B Female 79.5
Sample C Male 65.8
Sample D Male 57.8
Entorhinal cortex
nTPM: 57.0
Samples: 4

Max nTPM: 63.4
Min nTPM: 41.5
Sample A Female 63.4
Sample B Female 62.9
Sample C Male 60.1
Sample D Male 41.5
Subiculum
nTPM: 58.3
Samples: 4

Max nTPM: 85.2
Min nTPM: 47.2
Sample A Female 85.2
Sample B Female 53.0
Sample C Male 47.2
Sample D Male 47.8
Ventral hippocampus
nTPM: 64.6
Samples: 4

Max nTPM: 68.9
Min nTPM: 53.3
Sample A Female 67.7
Sample B Female 53.3
Sample C Male 68.4
Sample D Male 68.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.0
Samples: 4

Max nTPM: 30.5
Min nTPM: 28.0
Sample A Male 28.1
Sample B Male 29.4
Sample C Female 30.5
Sample D Female 28.0
Hippocampal formation
nTPM: 30.4
Samples: 4

Max nTPM: 34.5
Min nTPM: 26.7
Sample A Male 32.0
Sample B Male 28.4
Sample C Female 26.7
Sample D Female 34.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
71654121 Antisense, RP_050927_03_D04, Mouse strain C57BL/6J (56 days, male) 1.9

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