PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:90.7 nTPM
HPA:90.7 nTPM
FANTOM5:116.4 Scaled Tags Per Million
Pig:59.8 nTPM
Mouse:33.0 nTPM
Allen mouse:0.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 90.7
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 69.3
2090 Male, age 80, both hemispheres 73.9
1984 Male, age 76, both hemispheres 71.4
2188 Female, age 91, both hemispheres 66.8
2301 Female, age 85, both hemispheres 65.2
Area postrema
nTPM: 90.7
2799 Male, age 61, both hemispheres 113.2
2306 Male, age 80, both hemispheres 91.6
2054 Male, age 76, both hemispheres 67.3
Cuneate nuclei
nTPM: 73.2
2381 Male, age 80, both hemispheres 76.1
2376 Male, age 61, both hemispheres 75.0
2131 Male, age 76, both hemispheres 68.5
Dorsal cochlear nucleus
nTPM: 75.4
2802 Male, age 74, right hemisphere 82.0
2378 Male, age 80, both hemispheres 80.3
2370 Male, age 61, both hemispheres 78.4
2058 Male, age 76, both hemispheres 69.9
2187 Female, age 91, both hemispheres 66.3
Dorsal medullary reticular nucleus
nTPM: 67.8
2373 Male, age 61, both hemispheres 76.3
2088 Male, age 76, both hemispheres 64.9
2040 Female, age 85, both hemispheres 62.2
Dorsal motor vagal complex
nTPM: 71.8
2797 Male, age 61, both hemispheres 88.2
2185 Male, age 76, both hemispheres 84.7
2643 Male, age 74, both hemispheres 81.5
2807 Female, age 85, both hemispheres 73.3
2844 Male, age 55, unknown 63.5
2813 Female, age 72, unknown 63.3
2133 Female, age 91, both hemispheres 61.4
2000 Male, age 74, unknown 58.6
Dorsal tegmental nucleus
nTPM: 69.8
2358 Male, age 61, both hemispheres 77.3
1936 Male, age 76, left hemisphere 67.7
2326 Male, age 74, both hemispheres 67.6
2083 Male, age 80, both hemispheres 66.7
Dorsolateral tegmental area
nTPM: 66.0
2337 Male, age 61, both hemispheres 76.7
2654 Male, age 80, both hemispheres 66.4
2751 Female, age 85, both hemispheres 63.8
2360 Male, age 74, both hemispheres 62.0
2141 Male, age 76, both hemispheres 61.0
Gigantocellular reticular nuclei, medullary
nTPM: 65.1
2314 Male, age 61, both hemispheres 72.5
2387 Female, age 91, both hemispheres 71.0
2310 Male, age 80, both hemispheres 65.6
1876 Female, age 85, both hemispheres 64.7
2022 Male, age 76, right hemisphere 62.0
2462 Male, age 74, both hemispheres 54.8
Gigantocellular reticular nuclei, pars
nTPM: 64.5
2330 Male, age 80, both hemispheres 69.8
2706 Male, age 80, both hemispheres 69.5
2336 Male, age 61, both hemispheres 67.8
2084 Female, age 85, both hemispheres 60.0
2168 Male, age 76, both hemispheres 55.3
Inferior olive
nTPM: 77.0
2178 Male, age 61, both hemispheres 84.9
2379 Male, age 80, both hemispheres 83.5
2628 Female, age 91, both hemispheres 76.1
2563 Male, age 74, both hemispheres 72.8
2085 Female, age 85, both hemispheres 67.6
Kolliker-Fuse nucleus
nTPM: 66.0
2793 Female, age 91, left hemisphere 69.9
2315 Male, age 76, right hemisphere 67.1
2163 Male, age 80, both hemispheres 60.9
Lateral lemniscal nuclei
nTPM: 62.0
2320 Female, age 91, left hemisphere 68.9
2036 Male, age 80, both hemispheres 63.0
2746 Female, age 85, left hemisphere 60.4
2169 Male, age 76, both hemispheres 59.2
2453 Male, age 74, right hemisphere 58.3
Lateral medullary reticular nucleus
nTPM: 70.9
2852 Male, age 80, both hemispheres 80.6
2374 Male, age 61, both hemispheres 77.1
2190 Female, age 85, both hemispheres 72.2
2804 Female, age 91, both hemispheres 69.0
2305 Male, age 74, both hemispheres 65.5
2044 Male, age 76, both hemispheres 60.9
Lateral parabrachial nucleus
nTPM: 72.6
2790 Male, age 61, both hemispheres 84.9
2792 Male, age 76, both hemispheres 81.8
2013 Male, age 80, both hemispheres 67.5
2139 Female, age 85, right hemisphere 56.2
Lateral vestibular nucleus
nTPM: 66.3
2311 Male, age 80, both hemispheres 68.3
2184 Male, age 76, both hemispheres 64.4
Locus coeruleus
nTPM: 57.0
2317 Female, age 72, unknown 61.9
2162 Male, age 80, both hemispheres 58.9
1980 Male, age 76, both hemispheres 58.8
2720 Male, age 74, both hemispheres 58.6
2788 Male, age 74, unknown 54.0
2014 Male, age 55, unknown 53.3
2123 Female, age 91, both hemispheres 53.2
Medial olivary nucleus
nTPM: 76.5
1943 Male, age 61, both hemispheres 84.5
1962 Male, age 76, both hemispheres 76.8
2138 Female, age 91, both hemispheres 73.7
2851 Male, age 80, both hemispheres 71.1
Medial parabrachial nucleus
nTPM: 68.0
2156 Male, age 61, both hemispheres 77.3
2463 Female, age 85, right hemisphere 71.7
2786 Male, age 76, both hemispheres 69.7
2170 Female, age 91, both hemispheres 61.3
2854 Male, age 80, both hemispheres 60.1
Medial periolivary nuclei
nTPM: 60.1
2081 Male, age 80, both hemispheres 70.0
2458 Female, age 91, both hemispheres 64.8
2791 Male, age 74, right hemisphere 58.6
2063 Male, age 76, both hemispheres 58.1
2171 Female, age 85, both hemispheres 49.2
Medial vestibular nucleus
nTPM: 63.4
2624 Male, age 61, both hemispheres 67.7
2803 Female, age 91, both hemispheres 66.4
2093 Male, age 80, both hemispheres 65.4
2801 Male, age 74, both hemispheres 63.2
2743 Female, age 85, both hemispheres 59.1
2134 Male, age 76, both hemispheres 58.6
Motor facial nucleus
nTPM: 63.1
2126 Male, age 61, both hemispheres 70.3
2795 Female, age 91, both hemispheres 70.2
2327 Male, age 80, both hemispheres 62.3
2697 Female, age 85, both hemispheres 60.5
2365 Male, age 74, right hemisphere 59.2
2062 Male, age 76, both hemispheres 56.0
Motor hypoglossal nucleus
nTPM: 64.0
2182 Male, age 80, both hemispheres 68.6
2125 Female, age 91, both hemispheres 65.5
2132 Female, age 85, both hemispheres 63.6
2277 Male, age 76, both hemispheres 62.4
2461 Male, age 61, both hemispheres 60.0
Motor trigeminal nucleus
nTPM: 65.5
2321 Female, age 91, both hemispheres 70.0
2560 Male, age 74, both hemispheres 67.7
2309 Male, age 76, both hemispheres 65.5
2335 Male, age 61, both hemispheres 63.4
2079 Male, age 80, both hemispheres 61.1
Nuclei of the trapezoid body
nTPM: 57.6
2368 Female, age 91, both hemispheres 65.4
2166 Male, age 80, both hemispheres 64.2
1983 Male, age 76, both hemispheres 57.8
2159 Male, age 61, both hemispheres 51.0
2735 Female, age 85, both hemispheres 49.7
Nucleus ambiguus
nTPM: 74.5
2071 Male, age 76, both hemispheres 83.7
2096 Female, age 85, both hemispheres 65.2
Nucleus cuneatus
nTPM: 82.0
2380 Male, age 80, both hemispheres 88.0
2805 Female, age 91, both hemispheres 87.1
2564 Male, age 74, both hemispheres 80.9
2808 Female, age 85, both hemispheres 80.5
2100 Male, age 76, both hemispheres 79.8
2562 Male, age 61, both hemispheres 75.4
Nucleus gracilis
nTPM: 86.2
2382 Male, age 80, both hemispheres 91.6
2299 Female, age 85, both hemispheres 90.9
2627 Male, age 74, both hemispheres 76.0
Nucleus raphe magnus
nTPM: 57.9
2459 Female, age 91, both hemispheres 66.4
2051 Male, age 76, both hemispheres 66.0
2328 Male, age 80, both hemispheres 64.0
2455 Male, age 74, both hemispheres 54.3
2172 Female, age 85, both hemispheres 50.2
2160 Male, age 61, both hemispheres 46.4
Nucleus raphe obscurus
nTPM: 76.5
2142 Male, age 76, midline 87.2
2800 Male, age 61, midline 71.6
2845 Female, age 85, midline 70.7
Nucleus raphe pallidus
nTPM: 72.5
2145 Male, age 76, midline 77.6
1924 Male, age 61, midline 76.2
2183 Male, age 80, midline 63.8
Nucleus tractus solitarii
nTPM: 60.0
2191 Female, age 85, both hemispheres 64.4
2307 Male, age 80, both hemispheres 63.8
2656 Male, age 76, both hemispheres 57.7
2144 Female, age 91, right hemisphere 54.3
Paramedian reticular nucleus
nTPM: 60.7
2052 Male, age 76, both hemispheres 64.4
2057 Male, age 80, both hemispheres 64.3
2313 Male, age 61, both hemispheres 57.2
2050 Female, age 85, both hemispheres 56.8
Parvicellular reticular nuclei
nTPM: 64.1
2095 Male, age 76, both hemispheres 66.8
2119 Male, age 80, both hemispheres 64.8
2558 Male, age 74, both hemispheres 60.6
Parvicellular reticular nuclei, medullary
nTPM: 66.0
2181 Male, age 80, left hemisphere 66.7
2091 Female, age 85, both hemispheres 65.9
2189 Female, age 91, both hemispheres 65.4
Peritrigeminal nucleus
nTPM: 70.5
2136 Male, age 76, both hemispheres 73.1
2067 Female, age 85, both hemispheres 70.4
2179 Male, age 61, both hemispheres 67.9
Pontine nuclei
nTPM: 59.9
2115 Male, age 80, left hemisphere 69.0
2319 Female, age 91, both hemispheres 66.7
2454 Male, age 74, left hemisphere 62.5
2109 Female, age 72, unknown 61.0
1863 Male, age 55, unknown 59.1
1968 Male, age 76, left hemisphere 56.9
2787 Female, age 85, both hemispheres 54.3
2727 Male, age 61, right hemisphere 49.7
Pontine raphe nucleus
nTPM: 58.0
2853 Male, age 76, midline 63.4
2122 Female, age 85, midline 52.6
Posteroventral cochlear nucleus
nTPM: 68.4
2371 Male, age 61, both hemispheres 76.5
2135 Female, age 91, both hemispheres 72.8
2341 Male, age 80, both hemispheres 72.1
2070 Male, age 76, both hemispheres 62.9
2752 Female, age 85, both hemispheres 57.8
Prepositus hypoglossal nucleus
nTPM: 64.7
2855 Female, age 85, right hemisphere 65.0
2086 Male, age 80, both hemispheres 64.4
Principal sensory trigeminal nucleus
nTPM: 60.8
2367 Female, age 91, left hemisphere 67.9
2324 Male, age 76, both hemispheres 67.1
2008 Male, age 80, left hemisphere 56.2
2158 Male, age 61, both hemispheres 51.8
Reticular pontine nucleus, caudal
nTPM: 64.8
2559 Male, age 74, both hemispheres 70.2
2457 Female, age 91, both hemispheres 64.9
2092 Male, age 76, both hemispheres 64.4
2332 Male, age 80, right hemisphere 59.7
Reticular pontine nucleus, oral
nTPM: 62.7
2167 Male, age 76, both hemispheres 68.1
2366 Female, age 91, both hemispheres 67.2
1939 Male, age 80, both hemispheres 62.2
2361 Male, age 74, both hemispheres 58.4
2012 Female, age 85, both hemispheres 57.9
Reticulotegmental nucleus
nTPM: 65.0
2452 Male, age 74, both hemispheres 69.3
2322 Female, age 91, both hemispheres 66.9
2333 Male, age 80, both hemispheres 65.9
2325 Male, age 76, both hemispheres 58.2
Spinal trigeminal nucleus, caudal
nTPM: 68.9
2312 Male, age 61, both hemispheres 72.0
2642 Male, age 74, both hemispheres 71.5
2308 Male, age 80, both hemispheres 69.7
2447 Male, age 76, both hemispheres 67.7
2390 Female, age 91, both hemispheres 63.8
Spinal trigeminal nucleus, interpolar
nTPM: 61.0
2386 Female, age 85, both hemispheres 65.7
2389 Female, age 91, both hemispheres 64.2
2033 Male, age 80, both hemispheres 62.9
2625 Male, age 61, both hemispheres 57.3
2066 Male, age 76, right hemisphere 54.9
Spinal trigeminal nucleus, oral
nTPM: 63.4
2164 Male, age 80, both hemispheres 67.5
1978 Male, age 76, both hemispheres 64.0
2737 Female, age 85, both hemispheres 58.6
Spinal vestibular nucleus
nTPM: 67.6
2384 Male, age 74, both hemispheres 75.5
2748 Male, age 76, both hemispheres 68.6
2806 Female, age 85, both hemispheres 66.7
2186 Female, age 91, both hemispheres 66.5
2780 Male, age 80, both hemispheres 64.4
2796 Male, age 61, both hemispheres 63.9
Subcoeruleus area
nTPM: 64.8
2369 Female, age 85, left hemisphere 72.0
2451 Male, age 74, both hemispheres 71.3
2089 Male, age 76, left hemisphere 64.7
2323 Female, age 91, left hemisphere 59.2
1958 Male, age 80, both hemispheres 56.6
Superior olive
nTPM: 62.0
2561 Female, age 91, both hemispheres 67.5
2329 Male, age 80, right hemisphere 65.9
2020 Male, age 76, both hemispheres 64.6
2364 Male, age 74, right hemisphere 59.3
1875 Female, age 85, both hemispheres 52.9
Superior vestibular nucleus
nTPM: 66.9
2061 Male, age 76, both hemispheres 73.8
2015 Male, age 80, both hemispheres 65.1
2383 Male, age 74, both hemispheres 61.8
Ventral medullary reticular nucleus
nTPM: 72.5
2372 Male, age 61, both hemispheres 80.4
2060 Male, age 76, both hemispheres 64.7
Ventral periolivary nuclei
nTPM: 59.9
2023 Male, age 76, both hemispheres 64.3
2794 Female, age 91, left hemisphere 61.6
2165 Male, age 80, both hemispheres 58.6
2130 Female, age 85, both hemispheres 54.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 68.0
2118 Male, age 80, both hemispheres 74.5
2180 Male, age 61, both hemispheres 69.3
2302 Female, age 91, both hemispheres 67.8
1986 Male, age 76, both hemispheres 64.9
2741 Female, age 85, both hemispheres 63.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 64.9
2456 Female, age 91, both hemispheres 72.9
2359 Male, age 61, both hemispheres 71.2
2161 Male, age 80, both hemispheres 67.9
2840 Female, age 85, both hemispheres 61.3
1959 Male, age 76, both hemispheres 60.1
2449 Male, age 74, both hemispheres 56.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 116.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 116.4
FF:10165-103B3 76 years, female 134.7
FF:10182-103D2 60 years, female 98.1
Medulla oblongata
Scaled Tags Per Million: 101.7
FF:10155-103A2 76 years, female 143.7
FF:10038-101F2 18-64 years, mixed 112.3
FF:10174-103C3 60 years, female 49.1
Pons
Scaled Tags Per Million: 68.6
FF:10033-101E6 18-54 years, mixed 68.6

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 59.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 59.8
Samples: 4

Max nTPM: 67.5
Min nTPM: 52.7
Sample A Female 52.7
Sample B Female 59.0
Sample C Male 60.0
Sample D Male 67.5
Pons
nTPM: 48.3
Samples: 4

Max nTPM: 54.3
Min nTPM: 42.1
Sample A Female 46.2
Sample B Female 50.4
Sample C Male 42.1
Sample D Male 54.3

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 33.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 33.0
Samples: 4

Max nTPM: 35.6
Min nTPM: 31.7
Sample A Male 35.6
Sample B Male 32.0
Sample C Female 31.7
Sample D Female 32.8

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.4
68498986 Antisense, RP_050113_02_G04, Mouse strain C57BL/6J (56 days, male) 0.4
Pons
Expression energy: 0.5
68498986 Antisense, RP_050113_02_G04, Mouse strain C57BL/6J (56 days, male) 0.5

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