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NPM1
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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:196.2 nTPM
HPA:196.2 nTPM
FANTOM5:121.1 Scaled Tags Per Million
Pig:41.9 nTPM

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 196.2
Sample id Sample description nTPM
Area postrema
nTPM: 182.5
2799 Male, age 61, both hemispheres 189.8
2306 Male, age 80, both hemispheres 189.4
2054 Male, age 76, both hemispheres 168.4
Cuneate nuclei
nTPM: 177.6
2381 Male, age 80, both hemispheres 184.4
2376 Male, age 61, both hemispheres 184.3
2131 Male, age 76, both hemispheres 163.9
Dorsal medullary reticular nucleus
nTPM: 172.5
2040 Female, age 85, both hemispheres 182.5
2373 Male, age 61, both hemispheres 176.2
2088 Male, age 76, both hemispheres 158.8
Dorsal motor vagal complex
nTPM: 179.4
2797 Male, age 61, both hemispheres 199.4
2813 Female, age 72, unknown 184.0
2807 Female, age 85, both hemispheres 182.7
2133 Female, age 91, both hemispheres 178.0
2643 Male, age 74, both hemispheres 177.6
2000 Male, age 74, unknown 174.8
2844 Male, age 55, unknown 174.0
2185 Male, age 76, both hemispheres 165.1
Gigantocellular reticular nuclei, medullary
nTPM: 182.1
2314 Male, age 61, both hemispheres 203.3
2387 Female, age 91, both hemispheres 190.9
2310 Male, age 80, both hemispheres 177.3
1876 Female, age 85, both hemispheres 175.3
2022 Male, age 76, right hemisphere 174.0
2462 Male, age 74, both hemispheres 172.0
Gigantocellular reticular nuclei, pars
nTPM: 178.0
2168 Male, age 76, both hemispheres 179.9
2336 Male, age 61, both hemispheres 179.4
2330 Male, age 80, both hemispheres 178.1
2706 Male, age 80, both hemispheres 176.5
2084 Female, age 85, both hemispheres 176.3
Inferior olive
nTPM: 195.9
2628 Female, age 91, both hemispheres 202.0
2563 Male, age 74, both hemispheres 197.0
2178 Male, age 61, both hemispheres 195.0
2379 Male, age 80, both hemispheres 193.7
2085 Female, age 85, both hemispheres 191.9
Lateral medullary reticular nucleus
nTPM: 196.2
2305 Male, age 74, both hemispheres 214.2
2804 Female, age 91, both hemispheres 209.3
2374 Male, age 61, both hemispheres 193.8
2852 Male, age 80, both hemispheres 190.0
2190 Female, age 85, both hemispheres 188.4
2044 Male, age 76, both hemispheres 181.6
Medial vestibular nucleus
nTPM: 187.9
2803 Female, age 91, both hemispheres 207.0
2624 Male, age 61, both hemispheres 195.5
2801 Male, age 74, both hemispheres 194.4
2743 Female, age 85, both hemispheres 178.0
2093 Male, age 80, both hemispheres 177.7
2134 Male, age 76, both hemispheres 174.5
Motor hypoglossal nucleus
nTPM: 178.6
2132 Female, age 85, both hemispheres 191.9
2125 Female, age 91, both hemispheres 189.5
2182 Male, age 80, both hemispheres 178.3
2461 Male, age 61, both hemispheres 176.0
2277 Male, age 76, both hemispheres 157.5
Nucleus ambiguus
nTPM: 165.2
2071 Male, age 76, both hemispheres 186.0
2096 Female, age 85, both hemispheres 144.4
Nucleus cuneatus
nTPM: 182.4
2808 Female, age 85, both hemispheres 198.7
2380 Male, age 80, both hemispheres 193.5
2564 Male, age 74, both hemispheres 190.8
2805 Female, age 91, both hemispheres 184.7
2562 Male, age 61, both hemispheres 169.3
2100 Male, age 76, both hemispheres 157.5
Nucleus gracilis
nTPM: 193.0
2627 Male, age 74, both hemispheres 205.2
2382 Male, age 80, both hemispheres 192.1
2299 Female, age 85, both hemispheres 181.7
Nucleus raphe magnus
nTPM: 184.3
2051 Male, age 76, both hemispheres 193.5
2160 Male, age 61, both hemispheres 191.1
2172 Female, age 85, both hemispheres 186.6
2328 Male, age 80, both hemispheres 181.3
2455 Male, age 74, both hemispheres 178.4
2459 Female, age 91, both hemispheres 174.9
Nucleus raphe obscurus
nTPM: 195.9
2845 Female, age 85, midline 212.5
2800 Male, age 61, midline 195.3
2142 Male, age 76, midline 180.0
Nucleus raphe pallidus
nTPM: 191.1
1924 Male, age 61, midline 207.1
2183 Male, age 80, midline 184.8
2145 Male, age 76, midline 181.4
Nucleus tractus solitarii
nTPM: 174.3
2144 Female, age 91, right hemisphere 207.6
2191 Female, age 85, both hemispheres 169.9
2656 Male, age 76, both hemispheres 167.0
2307 Male, age 80, both hemispheres 152.6
Parvicellular reticular nuclei
nTPM: 177.1
2119 Male, age 80, both hemispheres 182.1
2095 Male, age 76, both hemispheres 178.7
2558 Male, age 74, both hemispheres 170.5
Parvicellular reticular nuclei, medullary
nTPM: 175.4
2189 Female, age 91, both hemispheres 182.3
2181 Male, age 80, left hemisphere 172.4
2091 Female, age 85, both hemispheres 171.6
Peritrigeminal nucleus
nTPM: 186.5
2136 Male, age 76, both hemispheres 189.4
2067 Female, age 85, both hemispheres 185.4
2179 Male, age 61, both hemispheres 184.8
Prepositus hypoglossal nucleus
nTPM: 181.6
2855 Female, age 85, right hemisphere 192.4
2086 Male, age 80, both hemispheres 170.8
Spinal trigeminal nucleus, caudal
nTPM: 178.4
2312 Male, age 61, both hemispheres 187.7
2390 Female, age 91, both hemispheres 185.0
2308 Male, age 80, both hemispheres 177.7
2642 Male, age 74, both hemispheres 176.4
2447 Male, age 76, both hemispheres 165.1
Spinal trigeminal nucleus, interpolar
nTPM: 186.3
2625 Male, age 61, both hemispheres 193.7
2389 Female, age 91, both hemispheres 189.3
2066 Male, age 76, right hemisphere 183.6
2033 Male, age 80, both hemispheres 183.3
2386 Female, age 85, both hemispheres 181.8
Spinal vestibular nucleus
nTPM: 188.2
2796 Male, age 61, both hemispheres 200.6
2806 Female, age 85, both hemispheres 196.3
2384 Male, age 74, both hemispheres 195.5
2186 Female, age 91, both hemispheres 180.9
2780 Male, age 80, both hemispheres 178.4
2748 Male, age 76, both hemispheres 177.2
Ventral medullary reticular nucleus
nTPM: 177.2
2372 Male, age 61, both hemispheres 186.8
2060 Male, age 76, both hemispheres 167.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 189.8
2302 Female, age 91, both hemispheres 198.3
2180 Male, age 61, both hemispheres 191.8
2118 Male, age 80, both hemispheres 190.9
2741 Female, age 85, both hemispheres 185.3
1986 Male, age 76, both hemispheres 182.9

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 121.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 121.1
FF:10155-103A2 76 years, female 151.2
FF:10038-101F2 18-64 years, mixed 122.5
FF:10174-103C3 60 years, female 89.7

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 41.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 42.0
Samples: 4

Max nTPM: 45.0
Min nTPM: 37.3
Sample A Female 44.4
Sample B Female 37.3
Sample C Male 45.0
Sample D Male 41.1

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.