HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Mouse brain, Intensity
Hippocampal formationi 		47.960
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:46.5 nTPM
HPA:46.5 nTPM
GTEx:51.3 nTPM
FANTOM5:216.5 Scaled Tags Per Million
Mouse:22.6 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045725Antibody CAB079745
Glial cells MediumMedium
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA071379
Hippocampal formation mean intensity 47.960
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 35.005
Molecular layer of the dentate gyrus 29.447
Granular dentate gyrus 45.905
CA1 - oriens layer 34.386
CA1 - pyramidal layer 47.146
CA1 - radiatum layer 30.723
CA2 - oriens layer 38.426
CA2 - pyramidal layer 44.068
CA2 - radiatum layer 38.950
CA3 - oriens layer 36.372
CA3 - pyramidal layer 42.941
CA3 - radiatum layer 34.015
Stratum lucidum 36.107
Lacunosum moleculare 47.960
Subiculum 33.395

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.5
Sample id Sample description nTPM
Hippocampus
nTPM: 46.2
2529 Female, age 94, left hemisphere 63.7
1911 Female, age 85, right hemisphere 48.0
1855 Male, age 76, left hemisphere 46.5
2148 Female, age 91, left hemisphere 44.0
2621 Female, age 67, right hemisphere 39.3
1898 Male, age 80, left hemisphere 35.5
Dentate gyrus
nTPM: 35.1
2246 Female, age 85, both hemispheres 47.2
2528 Male, age 74, both hemispheres 44.0
2530 Female, age 94, left hemisphere 34.7
2010 Male, age 76, both hemispheres 29.2
1927 Female, age 91, both hemispheres 28.4
2531 Female, age 67, both hemispheres 27.4
Entorhinal gyrus
nTPM: 43.5
1787 Male, age 76, left hemisphere 60.7
2117 Female, age 91, right hemisphere 60.5
2686 Male, age 75, right hemisphere 41.9
1938 Female, age 85, left hemisphere 39.4
2764 Male, age 80, right hemisphere 33.0
2613 Female, age 94, left hemisphere 25.5
Hippocampus, CA1
nTPM: 35.3
2527 Male, age 74, both hemispheres 51.9
1873 Female, age 85, both hemispheres 42.2
2082 Female, age 91, right hemisphere 40.4
2749 Male, age 80, left hemisphere 21.3
2045 Male, age 76, both hemispheres 20.8
Hippocampus, CA2
nTPM: 38.9
2249 Male, age 74, both hemispheres 54.9
2113 Female, age 91, right hemisphere 44.4
1940 Female, age 85, left hemisphere 43.2
2437 Female, age 94, left hemisphere 37.9
1963 Male, age 80, left hemisphere 30.3
1892 Male, age 76, both hemispheres 22.8
Hippocampus, CA3
nTPM: 30.6
1891 Female, age 85, both hemispheres 42.7
2436 Male, age 74, both hemispheres 36.1
2861 Female, age 67, both hemispheres 32.8
1867 Male, age 76, both hemispheres 27.9
2137 Male, age 80, left hemisphere 22.6
2620 Female, age 94, left hemisphere 21.4
Parahippocampal cortex
nTPM: 39.5
2250 Female, age 67, right hemisphere 54.0
2692 Male, age 74, both hemispheres 50.2
2622 Female, age 67, right hemisphere 45.7
2245 Female, age 91, both hemispheres 43.3
1933 Female, age 85, both hemispheres 40.5
1990 Female, age 91, right hemisphere 38.9
2532 Female, age 72, left hemisphere 35.6
1850 Male, age 80, both hemispheres 30.9
2693 Female, age 94, both hemispheres 30.9
2018 Male, age 76, both hemispheres 24.8
Perirhinal gyrus
nTPM: 35.4
2848 Male, age 76, right hemisphere 41.8
2521 Female, age 94, right hemisphere 34.6
1841 Female, age 85, right hemisphere 33.8
1847 Female, age 91, left hemisphere 33.4
1794 Male, age 80, right hemisphere 33.3
Subiculum
nTPM: 46.5
2619 Male, age 74, both hemispheres 56.4
2438 Female, age 94, left hemisphere 55.7
2729 Female, age 91, right hemisphere 53.3
2042 Male, age 76, both hemispheres 43.2
1977 Female, age 85, both hemispheres 36.5
1901 Male, age 80, both hemispheres 34.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 51.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 51.3
Samples: 197

Max nTPM: 126.5
Min nTPM: 15.3
Std nTPM: 20.0
Median nTPM: 47.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 126.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 113.5
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 108.4
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 100.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 96.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 93.1
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 90.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 90.8
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 89.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 88.1
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 86.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 216.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 216.5
FF:10153-102I9 76 years, female 299.2
FF:10169-103B7 60 years, female 133.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.5
Samples: 4

Max nTPM: 23.0
Min nTPM: 19.5
Sample A Male 23.0
Sample B Male 22.8
Sample C Female 20.5
Sample D Female 19.5
Hippocampal formation
nTPM: 22.6
Samples: 4

Max nTPM: 24.9
Min nTPM: 19.6
Sample A Male 24.9
Sample B Male 23.9
Sample C Female 19.6
Sample D Female 22.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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