PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:158.6 nTPM
HPA:158.6 nTPM
FANTOM5:42.2 Scaled Tags Per Million
Pig:57.5 nTPM
Mouse:38.6 nTPM
Allen mouse:0.7 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 158.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 123.9
2090 Male, age 80, both hemispheres 129.4
2301 Female, age 85, both hemispheres 123.3
1984 Male, age 76, both hemispheres 121.4
2188 Female, age 91, both hemispheres 121.3
Area postrema
nTPM: 157.3
2799 Male, age 61, both hemispheres 187.8
2306 Male, age 80, both hemispheres 149.8
2054 Male, age 76, both hemispheres 134.2
Cuneate nuclei
nTPM: 135.6
2131 Male, age 76, both hemispheres 141.5
2381 Male, age 80, both hemispheres 132.7
2376 Male, age 61, both hemispheres 132.6
Dorsal cochlear nucleus
nTPM: 142.1
2802 Male, age 74, right hemisphere 151.7
2378 Male, age 80, both hemispheres 144.1
2370 Male, age 61, both hemispheres 140.9
2058 Male, age 76, both hemispheres 138.8
2187 Female, age 91, both hemispheres 135.0
Dorsal medullary reticular nucleus
nTPM: 133.1
2040 Female, age 85, both hemispheres 135.2
2088 Male, age 76, both hemispheres 134.5
2373 Male, age 61, both hemispheres 129.8
Dorsal motor vagal complex
nTPM: 151.7
2844 Male, age 55, unknown 175.5
2797 Male, age 61, both hemispheres 161.2
2133 Female, age 91, both hemispheres 153.4
2643 Male, age 74, both hemispheres 148.9
2185 Male, age 76, both hemispheres 148.0
2813 Female, age 72, unknown 147.7
2000 Male, age 74, unknown 147.5
2807 Female, age 85, both hemispheres 131.2
Dorsal tegmental nucleus
nTPM: 136.0
2358 Male, age 61, both hemispheres 141.2
2083 Male, age 80, both hemispheres 139.0
2326 Male, age 74, both hemispheres 133.1
1936 Male, age 76, left hemisphere 130.8
Dorsolateral tegmental area
nTPM: 133.8
2141 Male, age 76, both hemispheres 141.8
2654 Male, age 80, both hemispheres 136.4
2337 Male, age 61, both hemispheres 130.7
2360 Male, age 74, both hemispheres 130.3
2751 Female, age 85, both hemispheres 130.0
Gigantocellular reticular nuclei, medullary
nTPM: 128.2
2314 Male, age 61, both hemispheres 138.3
2310 Male, age 80, both hemispheres 131.7
1876 Female, age 85, both hemispheres 128.0
2387 Female, age 91, both hemispheres 127.9
2462 Male, age 74, both hemispheres 123.0
2022 Male, age 76, right hemisphere 120.1
Gigantocellular reticular nuclei, pars
nTPM: 127.2
2084 Female, age 85, both hemispheres 138.3
2336 Male, age 61, both hemispheres 134.0
2330 Male, age 80, both hemispheres 127.5
2706 Male, age 80, both hemispheres 124.5
2168 Male, age 76, both hemispheres 111.6
Inferior olive
nTPM: 144.2
2563 Male, age 74, both hemispheres 147.7
2085 Female, age 85, both hemispheres 146.3
2379 Male, age 80, both hemispheres 143.7
2628 Female, age 91, both hemispheres 143.5
2178 Male, age 61, both hemispheres 139.8
Kolliker-Fuse nucleus
nTPM: 140.7
2163 Male, age 80, both hemispheres 163.2
2315 Male, age 76, right hemisphere 136.0
2793 Female, age 91, left hemisphere 122.8
Lateral lemniscal nuclei
nTPM: 116.0
2320 Female, age 91, left hemisphere 123.1
2453 Male, age 74, right hemisphere 120.9
2746 Female, age 85, left hemisphere 113.2
2036 Male, age 80, both hemispheres 112.4
2169 Male, age 76, both hemispheres 110.4
Lateral medullary reticular nucleus
nTPM: 129.8
2190 Female, age 85, both hemispheres 136.1
2804 Female, age 91, both hemispheres 135.4
2374 Male, age 61, both hemispheres 133.8
2852 Male, age 80, both hemispheres 129.4
2305 Male, age 74, both hemispheres 123.7
2044 Male, age 76, both hemispheres 120.5
Lateral parabrachial nucleus
nTPM: 124.8
2790 Male, age 61, both hemispheres 134.7
2792 Male, age 76, both hemispheres 125.4
2013 Male, age 80, both hemispheres 121.0
2139 Female, age 85, right hemisphere 118.1
Lateral vestibular nucleus
nTPM: 158.6
2184 Male, age 76, both hemispheres 181.1
2311 Male, age 80, both hemispheres 136.0
Locus coeruleus
nTPM: 148.8
1980 Male, age 76, both hemispheres 155.5
2317 Female, age 72, unknown 155.2
2014 Male, age 55, unknown 154.5
2123 Female, age 91, both hemispheres 152.4
2720 Male, age 74, both hemispheres 148.5
2162 Male, age 80, both hemispheres 143.6
2788 Male, age 74, unknown 131.7
Medial olivary nucleus
nTPM: 132.0
2138 Female, age 91, both hemispheres 145.2
1962 Male, age 76, both hemispheres 130.5
2851 Male, age 80, both hemispheres 128.7
1943 Male, age 61, both hemispheres 123.7
Medial parabrachial nucleus
nTPM: 131.4
2156 Male, age 61, both hemispheres 144.4
2170 Female, age 91, both hemispheres 137.5
2786 Male, age 76, both hemispheres 128.1
2463 Female, age 85, right hemisphere 125.5
2854 Male, age 80, both hemispheres 121.6
Medial periolivary nuclei
nTPM: 117.5
2458 Female, age 91, both hemispheres 126.1
2081 Male, age 80, both hemispheres 117.4
2791 Male, age 74, right hemisphere 116.8
2171 Female, age 85, both hemispheres 113.9
2063 Male, age 76, both hemispheres 113.5
Medial vestibular nucleus
nTPM: 142.9
2134 Male, age 76, both hemispheres 167.1
2624 Male, age 61, both hemispheres 163.7
2801 Male, age 74, both hemispheres 135.0
2093 Male, age 80, both hemispheres 131.1
2803 Female, age 91, both hemispheres 130.9
2743 Female, age 85, both hemispheres 129.7
Motor facial nucleus
nTPM: 123.4
2795 Female, age 91, both hemispheres 138.2
2126 Male, age 61, both hemispheres 132.8
2365 Male, age 74, right hemisphere 119.7
2327 Male, age 80, both hemispheres 118.8
2062 Male, age 76, both hemispheres 116.6
2697 Female, age 85, both hemispheres 114.5
Motor hypoglossal nucleus
nTPM: 147.5
2461 Male, age 61, both hemispheres 162.0
2277 Male, age 76, both hemispheres 149.3
2182 Male, age 80, both hemispheres 147.0
2125 Female, age 91, both hemispheres 142.9
2132 Female, age 85, both hemispheres 136.3
Motor trigeminal nucleus
nTPM: 126.5
2335 Male, age 61, both hemispheres 135.8
2321 Female, age 91, both hemispheres 130.4
2309 Male, age 76, both hemispheres 127.5
2560 Male, age 74, both hemispheres 124.7
2079 Male, age 80, both hemispheres 114.2
Nuclei of the trapezoid body
nTPM: 116.4
2368 Female, age 91, both hemispheres 127.9
2166 Male, age 80, both hemispheres 115.8
1983 Male, age 76, both hemispheres 115.0
2735 Female, age 85, both hemispheres 111.8
2159 Male, age 61, both hemispheres 111.4
Nucleus ambiguus
nTPM: 139.4
2096 Female, age 85, both hemispheres 147.7
2071 Male, age 76, both hemispheres 131.0
Nucleus cuneatus
nTPM: 141.9
2562 Male, age 61, both hemispheres 151.8
2564 Male, age 74, both hemispheres 146.1
2100 Male, age 76, both hemispheres 145.2
2805 Female, age 91, both hemispheres 141.6
2380 Male, age 80, both hemispheres 135.0
2808 Female, age 85, both hemispheres 131.8
Nucleus gracilis
nTPM: 137.3
2299 Female, age 85, both hemispheres 144.6
2627 Male, age 74, both hemispheres 137.8
2382 Male, age 80, both hemispheres 129.5
Nucleus raphe magnus
nTPM: 118.5
2459 Female, age 91, both hemispheres 125.2
2455 Male, age 74, both hemispheres 121.6
2051 Male, age 76, both hemispheres 121.1
2328 Male, age 80, both hemispheres 120.9
2160 Male, age 61, both hemispheres 111.5
2172 Female, age 85, both hemispheres 110.9
Nucleus raphe obscurus
nTPM: 128.9
2845 Female, age 85, midline 130.5
2142 Male, age 76, midline 130.3
2800 Male, age 61, midline 126.1
Nucleus raphe pallidus
nTPM: 140.1
2183 Male, age 80, midline 150.5
1924 Male, age 61, midline 137.9
2145 Male, age 76, midline 132.0
Nucleus tractus solitarii
nTPM: 144.3
2191 Female, age 85, both hemispheres 156.9
2656 Male, age 76, both hemispheres 148.0
2307 Male, age 80, both hemispheres 144.3
2144 Female, age 91, right hemisphere 128.0
Paramedian reticular nucleus
nTPM: 128.7
2313 Male, age 61, both hemispheres 143.6
2057 Male, age 80, both hemispheres 137.8
2050 Female, age 85, both hemispheres 119.4
2052 Male, age 76, both hemispheres 113.8
Parvicellular reticular nuclei
nTPM: 126.8
2119 Male, age 80, both hemispheres 139.5
2095 Male, age 76, both hemispheres 123.1
2558 Male, age 74, both hemispheres 117.8
Parvicellular reticular nuclei, medullary
nTPM: 146.1
2091 Female, age 85, both hemispheres 157.1
2189 Female, age 91, both hemispheres 141.2
2181 Male, age 80, left hemisphere 139.9
Peritrigeminal nucleus
nTPM: 127.6
2067 Female, age 85, both hemispheres 134.9
2179 Male, age 61, both hemispheres 124.9
2136 Male, age 76, both hemispheres 123.0
Pontine nuclei
nTPM: 116.5
2319 Female, age 91, both hemispheres 123.8
2454 Male, age 74, left hemisphere 121.8
1968 Male, age 76, left hemisphere 119.4
2115 Male, age 80, left hemisphere 117.3
2787 Female, age 85, both hemispheres 113.7
2109 Female, age 72, unknown 113.2
1863 Male, age 55, unknown 112.0
2727 Male, age 61, right hemisphere 110.9
Pontine raphe nucleus
nTPM: 131.2
2853 Male, age 76, midline 137.8
2122 Female, age 85, midline 124.6
Posteroventral cochlear nucleus
nTPM: 128.4
2371 Male, age 61, both hemispheres 136.4
2070 Male, age 76, both hemispheres 130.6
2752 Female, age 85, both hemispheres 127.9
2341 Male, age 80, both hemispheres 124.1
2135 Female, age 91, both hemispheres 123.0
Prepositus hypoglossal nucleus
nTPM: 142.3
2855 Female, age 85, right hemisphere 145.2
2086 Male, age 80, both hemispheres 139.4
Principal sensory trigeminal nucleus
nTPM: 129.3
2324 Male, age 76, both hemispheres 171.5
2367 Female, age 91, left hemisphere 120.1
2158 Male, age 61, both hemispheres 113.2
2008 Male, age 80, left hemisphere 112.4
Reticular pontine nucleus, caudal
nTPM: 121.3
2559 Male, age 74, both hemispheres 125.8
2457 Female, age 91, both hemispheres 122.4
2332 Male, age 80, right hemisphere 119.2
2092 Male, age 76, both hemispheres 117.8
Reticular pontine nucleus, oral
nTPM: 124.0
1939 Male, age 80, both hemispheres 130.8
2167 Male, age 76, both hemispheres 129.4
2366 Female, age 91, both hemispheres 121.7
2361 Male, age 74, both hemispheres 120.2
2012 Female, age 85, both hemispheres 118.0
Reticulotegmental nucleus
nTPM: 133.8
2322 Female, age 91, both hemispheres 139.7
2452 Male, age 74, both hemispheres 137.7
2333 Male, age 80, both hemispheres 131.0
2325 Male, age 76, both hemispheres 127.0
Spinal trigeminal nucleus, caudal
nTPM: 140.5
2390 Female, age 91, both hemispheres 158.8
2447 Male, age 76, both hemispheres 148.0
2308 Male, age 80, both hemispheres 140.9
2312 Male, age 61, both hemispheres 129.1
2642 Male, age 74, both hemispheres 125.7
Spinal trigeminal nucleus, interpolar
nTPM: 141.5
2625 Male, age 61, both hemispheres 202.7
2033 Male, age 80, both hemispheres 136.4
2386 Female, age 85, both hemispheres 129.4
2389 Female, age 91, both hemispheres 122.5
2066 Male, age 76, right hemisphere 116.8
Spinal trigeminal nucleus, oral
nTPM: 147.1
2164 Male, age 80, both hemispheres 160.8
1978 Male, age 76, both hemispheres 143.1
2737 Female, age 85, both hemispheres 137.3
Spinal vestibular nucleus
nTPM: 130.0
2780 Male, age 80, both hemispheres 133.9
2796 Male, age 61, both hemispheres 132.6
2384 Male, age 74, both hemispheres 131.4
2806 Female, age 85, both hemispheres 129.1
2186 Female, age 91, both hemispheres 128.4
2748 Male, age 76, both hemispheres 124.8
Subcoeruleus area
nTPM: 127.0
2451 Male, age 74, both hemispheres 141.1
2323 Female, age 91, left hemisphere 138.6
2369 Female, age 85, left hemisphere 123.1
1958 Male, age 80, both hemispheres 121.2
2089 Male, age 76, left hemisphere 111.2
Superior olive
nTPM: 117.1
2561 Female, age 91, both hemispheres 124.8
2364 Male, age 74, right hemisphere 120.1
2329 Male, age 80, right hemisphere 118.2
2020 Male, age 76, both hemispheres 113.7
1875 Female, age 85, both hemispheres 108.5
Superior vestibular nucleus
nTPM: 136.9
2061 Male, age 76, both hemispheres 144.2
2015 Male, age 80, both hemispheres 136.6
2383 Male, age 74, both hemispheres 129.9
Ventral medullary reticular nucleus
nTPM: 134.0
2372 Male, age 61, both hemispheres 138.3
2060 Male, age 76, both hemispheres 129.7
Ventral periolivary nuclei
nTPM: 116.6
2794 Female, age 91, left hemisphere 122.1
2165 Male, age 80, both hemispheres 117.3
2130 Female, age 85, both hemispheres 114.5
2023 Male, age 76, both hemispheres 112.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 132.1
2302 Female, age 91, both hemispheres 140.9
2741 Female, age 85, both hemispheres 135.3
2180 Male, age 61, both hemispheres 133.7
2118 Male, age 80, both hemispheres 128.4
1986 Male, age 76, both hemispheres 122.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 124.5
2456 Female, age 91, both hemispheres 136.3
2359 Male, age 61, both hemispheres 132.2
2840 Female, age 85, both hemispheres 126.8
2161 Male, age 80, both hemispheres 120.6
2449 Male, age 74, both hemispheres 118.9
1959 Male, age 76, both hemispheres 112.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 39.9
FF:10165-103B3 76 years, female 45.3
FF:10182-103D2 60 years, female 34.4
Medulla oblongata
Scaled Tags Per Million: 42.2
FF:10038-101F2 18-64 years, mixed 57.7
FF:10155-103A2 76 years, female 38.7
FF:10174-103C3 60 years, female 30.3
Pons
Scaled Tags Per Million: 26.1
FF:10033-101E6 18-54 years, mixed 26.1

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 57.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 52.1
Samples: 4

Max nTPM: 61.8
Min nTPM: 44.5
Sample A Female 44.5
Sample B Female 44.7
Sample C Male 61.8
Sample D Male 57.4
Pons
nTPM: 57.6
Samples: 4

Max nTPM: 82.9
Min nTPM: 41.3
Sample A Female 82.9
Sample B Female 41.3
Sample C Male 56.5
Sample D Male 49.5

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 38.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 38.6
Samples: 4

Max nTPM: 43.7
Min nTPM: 33.6
Sample A Male 41.4
Sample B Male 35.6
Sample C Female 43.7
Sample D Female 33.6

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.7
70612727 Antisense, RP_050725_01_C05, Mouse strain C57BL/6J (56 days, male) 1.1
75695661 Antisense, RP_060518_04_C12, Mouse strain C57BL/6J (56 days, male) 0.4
Pons
Expression energy: 0.7
70612727 Antisense, RP_050725_01_C05, Mouse strain C57BL/6J (56 days, male) 1.1
75695661 Antisense, RP_060518_04_C12, Mouse strain C57BL/6J (56 days, male) 0.3

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