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NDUFB1
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BRAIN RETINA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Eye
Retina
RETINA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:260.9 nTPM
GTEx:260.9 nTPM
FANTOM5:63.4 Scaled Tags Per Million
Pig:39.8 nTPM
Mouse:154.2 nTPM

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 260.9
GTEx sample id Sample description nTPM
Retina
Average nTPM: 260.9
Samples: 105

Max nTPM: 390.4
Min nTPM: 132.2
Std nTPM: 44.1
Median nTPM:
375_1 74 years, female 390.4
265_1 87 years, male 349.7
35_1 74 years, female 347.3
162_1 79 years, female 343.8
377_1 82 years, female 340.5
413_1 59 years, female 333.2
142_1 61 years, female 329.4
414_1 84 years, female 328.2
379_1 60 years, male 326.7
490_1 67 years, female 322.7
501_1 88 years, male 321.2
396_1 62 years, male 319.8
17_1 71 years, male 312.0
384_1 83 years, male 305.4
4_1 88 years, female 303.0
313_1 79 years, female 299.9
237_1 82 years, male 299.2
126_1 63 years, male 298.8
394_1 75 years, female 298.7
246_1 77 years, male 296.8
415_1 77 years, female 296.6
117_1 61 years, male 295.7
389_1 86 years, female 294.4
386_1 76 years, male 292.6
115_1 83 years, male 291.1
153_1 70 years, female 290.8
466_1 57 years, female 289.2
229_1 69 years, female 288.9
324_1 76 years, male 287.3
120_1 70 years, female 287.0
319_1 81 years, male 285.9
491_1 89 years, female 285.1
145_1 84 years, male 284.7
217_1 76 years, male 281.9
43_1 64 years, female 278.7
254_1 77 years, female 278.4
243_1 75 years, male 278.3
81_1 67 years, male 277.7
266_1 85 years, male 277.6
376_1 75 years, female 277.5
526_1 61 years, male 273.3
468_1 89 years, male 272.3
89_1 63 years, male 271.8
149_1 88 years, male 271.2
119_1 70 years, female 269.0
286_1 68 years, female 268.1
517_1 88 years, male 264.8
518_1 75 years, female 264.7
315_1 62 years, female 264.6
264_1 73 years, female 263.1
109_1 81 years, female 262.1
499_1 55 years, female 262.0
18_1 88 years, male 261.2
9_1 66 years, female 260.1
480_1 63 years, male 259.4
189_1 76 years, male 259.2
347_1 72 years, male 258.6
354_1 81 years, female 256.3
2_1 77 years, female 255.7
139_1 64 years, female 255.5
452_1 88 years, female 253.3
42_1 85 years, male 251.3
316_1 62 years, male 251.0
447_1 81 years, male 250.5
353_1 82 years, female 249.5
163_1 78 years, male 247.8
32_1 67 years, male 246.4
503_1 68 years, male 245.7
322_1 76 years, male 245.5
352_1 62 years, male 245.3
172_1 72 years, female 239.3
137_1 83 years, male 239.1
506_1 65 years, male 238.4
335_1 73 years, female 238.0
406_1 79 years, male 236.7
321_1 62 years, female 236.1
99_1 64 years, male 235.6
349_1 83 years, male 234.8
356_1 87 years, female 234.8
288_1 66 years, female 232.3
6_1 73 years, female 231.9
173_1 67 years, male 225.6
404_1 82 years, female 224.6
251_1 78 years, male 221.4
425_1 59 years, female 221.4
177_1 74 years, male 220.4
292_1 71 years, male 218.4
311_1 78 years, male 218.4
350_1 84 years, female 215.6
405_1 91 years, male 215.4
351_1 91 years, male 215.2
218_1 71 years, female 211.5
355_1 70 years, female 210.9
320_1 89 years, female 202.4
314_1 67 years, male 201.9
348_1 84 years, male 197.7
295_1 61 years, female 196.2
318_1 68 years, male 194.4
307_1 66 years, female 193.2
495_1 57 years, female 191.5
317_1 60 years, male 187.0
291_1 76 years, male 184.2
308_1 70 years, female 176.7
293_1 68 years, female 176.0
41_1 94 years, female 132.2
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 63.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 63.4
FF:10030-101E3 24-65 years, mixed 63.4

RETINA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 39.8
Pig sample Sample description nTPM
Retina
nTPM: 39.8
Samples: 4

Max nTPM: 46.7
Min nTPM: 35.1
Sample A Female 35.1
Sample B Female 42.2
Sample C Male 46.7
Sample D Male 35.1

RETINA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 154.2
Mouse sample Sample description nTPM
Retina
nTPM: 154.2
Samples: 4

Max nTPM: 181.3
Min nTPM: 128.9
Sample A Male 181.3
Sample B Male 129.3
Sample C Female 177.4
Sample D Female 128.9

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.