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NDUFB1
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BRAIN THALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Thalamus
THALAMUS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:376.4 nTPM
HPA:376.4 nTPM
FANTOM5:73.8 Scaled Tags Per Million
Pig:75.5 nTPM
Mouse:121.0 nTPM

THALAMUS - HPA Brain RNA-seq
Max nTPM 376.4
Sample id Sample description nTPM
Anterior thalamic nucleus, ventral
nTPM: 365.9
2032 Female, age 42, unknown 367.9
2396 Male, age 61, right hemisphere 367.4
2497 Male, age 66, unknown 362.4
Centromedial thalamic nucleus
nTPM: 360.8
2401 Male, age 76, right hemisphere 376.9
2279 Female, age 85, left hemisphere 344.7
Habenula
nTPM: 374.4
1957 Male, age 80, both hemispheres 391.2
2203 Male, age 61, left hemisphere 380.2
2252 Male, age 62, unknown 364.0
2276 Male, age 66, unknown 362.0
Lateral geniculate body
nTPM: 376.4
2106 Female, age 67, right hemisphere 389.4
1953 Male, age 62, unknown 386.4
2575 Female, age 94, right hemisphere 382.6
2035 Female, age 72, unknown 380.6
2399 Male, age 61, left hemisphere 380.6
2841 Male, age 80, both hemispheres 365.8
2857 Male, age 74, right hemisphere 363.0
2659 Male, age 66, unknown 362.5
Lateral thalamic nuclei
nTPM: 375.7
2765 Female, age 67, both hemispheres 396.8
2573 Female, age 94, left hemisphere 380.6
1903 Male, age 76, left hemisphere 380.4
2577 Male, age 74, both hemispheres 361.8
2661 Female, age 72, unknown 359.0
Medial dorsal thalamic nucleus
nTPM: 373.5
2572 Female, age 94, right hemisphere 403.5
1859 Male, age 76, both hemispheres 382.7
2026 Male, age 62, unknown 379.6
2498 Male, age 66, unknown 377.2
1971 Male, age 61, right hemisphere 376.4
2402 Female, age 67, both hemispheres 374.3
2283 Male, age 80, right hemisphere 373.5
2039 Female, age 72, unknown 371.8
1930 Female, age 42, unknown 370.5
1810 Male, age 48, unknown 369.0
2492 Male, age 75, right hemisphere 360.5
2576 Male, age 74, both hemispheres 359.4
2660 Female, age 72, unknown 357.2
Medial geniculate body
nTPM: 370.4
2650 Female, age 94, left hemisphere 387.6
1811 Female, age 42, unknown 384.3
2049 Male, age 76, both hemispheres 375.7
2657 Male, age 74, right hemisphere 369.9
2571 Male, age 75, right hemisphere 361.5
2207 Male, age 80, right hemisphere 358.1
2217 Female, age 72, unknown 355.7
Nucleus reuniens
nTPM: 362.2
2212 Female, age 67, left hemisphere 380.9
2205 Male, age 80, left hemisphere 360.4
2210 Female, age 85, left hemisphere 345.3
Nucleus rhomboideus
nTPM: 358.9
2206 Male, age 80, both hemispheres 367.9
2213 Female, age 67, left hemisphere 363.6
2280 Female, age 85, left hemisphere 345.3
Posterior thalamic nucleus
nTPM: 372.2
2649 Female, age 94, both hemispheres 401.2
2655 Male, age 74, right hemisphere 364.5
2495 Female, age 67, right hemisphere 363.2
2266 Male, age 76, right hemisphere 360.1
Pulvinar
nTPM: 372.0
1932 Male, age 80, right hemisphere 386.8
2398 Male, age 61, left hemisphere 375.7
1972 Male, age 62, unknown 374.6
2496 Female, age 67, right hemisphere 373.6
2499 Male, age 66, unknown 372.0
1929 Male, age 48, unknown 371.9
2724 Male, age 74, right hemisphere 370.5
2582 Female, age 72, unknown 365.8
2214 Male, age 76, right hemisphere 365.7
1899 Female, age 42, unknown 363.9
Subthalamic nucleus
nTPM: 364.6
2658 Male, age 74, both hemispheres 377.3
2124 Male, age 62, unknown 370.2
2275 Male, age 66, unknown 370.0
2406 Female, age 72, unknown 366.3
2282 Male, age 61, both hemispheres 362.1
2779 Female, age 42, unknown 360.1
2056 Female, age 72, unknown 356.7
2216 Male, age 48, unknown 353.7
Ventral posterolateral thalamic nucleus
nTPM: 361.9
2197 Male, age 80, both hemispheres 374.1
2740 Male, age 76, right hemisphere 369.3
2578 Male, age 74, both hemispheres 365.8
2397 Male, age 61, right hemisphere 358.0
2570 Male, age 75, right hemisphere 357.6
2581 Female, age 72, unknown 346.4
Ventral posteromedial thalamic nucleus
nTPM: 363.2
2202 Male, age 61, left hemisphere 375.8
2758 Male, age 80, both hemispheres 367.5
2653 Male, age 74, both hemispheres 358.6
2127 Male, age 76, right hemisphere 357.9
2281 Male, age 75, right hemisphere 356.2
Ventral thalamic nuclei
nTPM: 367.7
1860 Male, age 76, both hemispheres 387.6
1845 Male, age 48, unknown 384.8
1912 Female, age 42, unknown 371.7
2580 Male, age 66, unknown 369.9
2285 Male, age 62, unknown 365.8
2291 Female, age 72, unknown 360.0
2858 Female, age 72, unknown 358.1
2652 Male, age 74, left hemisphere 355.7
2204 Male, age 80, both hemispheres 355.4
Ventromedial nucleus
nTPM: 367.7
1822 Female, age 42, unknown 371.1
1982 Female, age 72, unknown 364.4
Zona incerta
nTPM: 367.2
2822 Male, age 74, right hemisphere 379.9
2215 Male, age 66, unknown 378.8
2403 Male, age 62, unknown 364.4
2208 Male, age 80, right hemisphere 360.1
2663 Female, age 72, unknown 352.6

THALAMUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 73.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Thalamus
Scaled Tags Per Million: 73.8
FF:10154-103A1 76 years, female 73.8

THALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 75.5
Pig sample Sample description nTPM
Thalamus
nTPM: 75.5
Samples: 4

Max nTPM: 91.0
Min nTPM: 53.5
Sample A Female 90.5
Sample B Female 67.1
Sample C Male 91.0
Sample D Male 53.5

THALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 121.0
Mouse sample Sample description nTPM
Thalamus
nTPM: 121.0
Samples: 4

Max nTPM: 147.0
Min nTPM: 100.9
Sample A Male 147.0
Sample B Male 119.2
Sample C Female 117.0
Sample D Female 100.9

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