PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:520.2 nTPM
HPA:520.2 nTPM
FANTOM5:82.8 Scaled Tags Per Million
Pig:91.9 nTPM
Mouse:50.1 nTPM
Allen mouse:0.1 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 520.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 431.3
2090 Male, age 80, both hemispheres 444.3
2301 Female, age 85, both hemispheres 432.2
1984 Male, age 76, both hemispheres 428.7
2188 Female, age 91, both hemispheres 420.2
Area postrema
nTPM: 519.1
2799 Male, age 61, both hemispheres 636.0
2054 Male, age 76, both hemispheres 473.7
2306 Male, age 80, both hemispheres 447.7
Cuneate nuclei
nTPM: 431.8
2376 Male, age 61, both hemispheres 464.2
2131 Male, age 76, both hemispheres 416.5
2381 Male, age 80, both hemispheres 414.8
Dorsal cochlear nucleus
nTPM: 461.9
2802 Male, age 74, right hemisphere 479.1
2370 Male, age 61, both hemispheres 467.3
2058 Male, age 76, both hemispheres 462.8
2378 Male, age 80, both hemispheres 460.9
2187 Female, age 91, both hemispheres 439.2
Dorsal medullary reticular nucleus
nTPM: 436.2
2040 Female, age 85, both hemispheres 445.4
2088 Male, age 76, both hemispheres 432.8
2373 Male, age 61, both hemispheres 430.5
Dorsal motor vagal complex
nTPM: 455.3
2000 Male, age 74, unknown 483.6
2844 Male, age 55, unknown 478.0
2797 Male, age 61, both hemispheres 473.3
2133 Female, age 91, both hemispheres 455.0
2643 Male, age 74, both hemispheres 451.9
2813 Female, age 72, unknown 442.0
2185 Male, age 76, both hemispheres 433.1
2807 Female, age 85, both hemispheres 425.8
Dorsal tegmental nucleus
nTPM: 453.6
2358 Male, age 61, both hemispheres 477.3
2326 Male, age 74, both hemispheres 448.9
1936 Male, age 76, left hemisphere 446.9
2083 Male, age 80, both hemispheres 441.5
Dorsolateral tegmental area
nTPM: 446.0
2337 Male, age 61, both hemispheres 468.5
2360 Male, age 74, both hemispheres 456.6
2654 Male, age 80, both hemispheres 445.8
2141 Male, age 76, both hemispheres 431.2
2751 Female, age 85, both hemispheres 428.1
Gigantocellular reticular nuclei, medullary
nTPM: 433.2
2462 Male, age 74, both hemispheres 458.0
2314 Male, age 61, both hemispheres 448.5
1876 Female, age 85, both hemispheres 430.5
2310 Male, age 80, both hemispheres 423.1
2387 Female, age 91, both hemispheres 422.1
2022 Male, age 76, right hemisphere 416.9
Gigantocellular reticular nuclei, pars
nTPM: 422.3
2084 Female, age 85, both hemispheres 433.2
2168 Male, age 76, both hemispheres 425.6
2330 Male, age 80, both hemispheres 418.0
2336 Male, age 61, both hemispheres 417.4
2706 Male, age 80, both hemispheres 417.2
Inferior olive
nTPM: 456.4
2563 Male, age 74, both hemispheres 481.7
2178 Male, age 61, both hemispheres 468.8
2085 Female, age 85, both hemispheres 451.5
2379 Male, age 80, both hemispheres 450.3
2628 Female, age 91, both hemispheres 429.7
Kolliker-Fuse nucleus
nTPM: 455.4
2315 Male, age 76, right hemisphere 525.9
2163 Male, age 80, both hemispheres 430.2
2793 Female, age 91, left hemisphere 409.9
Lateral lemniscal nuclei
nTPM: 423.9
2746 Female, age 85, left hemisphere 469.5
2169 Male, age 76, both hemispheres 423.5
2453 Male, age 74, right hemisphere 416.1
2036 Male, age 80, both hemispheres 414.3
2320 Female, age 91, left hemisphere 395.9
Lateral medullary reticular nucleus
nTPM: 459.8
2305 Male, age 74, both hemispheres 505.4
2852 Male, age 80, both hemispheres 467.2
2190 Female, age 85, both hemispheres 454.7
2044 Male, age 76, both hemispheres 450.8
2804 Female, age 91, both hemispheres 445.6
2374 Male, age 61, both hemispheres 434.9
Lateral parabrachial nucleus
nTPM: 459.6
2792 Male, age 76, both hemispheres 468.1
2790 Male, age 61, both hemispheres 465.3
2139 Female, age 85, right hemisphere 454.8
2013 Male, age 80, both hemispheres 450.1
Lateral vestibular nucleus
nTPM: 436.5
2311 Male, age 80, both hemispheres 441.0
2184 Male, age 76, both hemispheres 431.9
Locus coeruleus
nTPM: 457.8
2788 Male, age 74, unknown 484.0
2317 Female, age 72, unknown 469.5
1980 Male, age 76, both hemispheres 465.9
2014 Male, age 55, unknown 460.7
2123 Female, age 91, both hemispheres 455.1
2162 Male, age 80, both hemispheres 437.0
2720 Male, age 74, both hemispheres 432.7
Medial olivary nucleus
nTPM: 483.7
1943 Male, age 61, both hemispheres 523.0
1962 Male, age 76, both hemispheres 492.1
2138 Female, age 91, both hemispheres 477.1
2851 Male, age 80, both hemispheres 442.6
Medial parabrachial nucleus
nTPM: 431.5
2170 Female, age 91, both hemispheres 445.5
2854 Male, age 80, both hemispheres 430.9
2786 Male, age 76, both hemispheres 430.8
2156 Male, age 61, both hemispheres 429.5
2463 Female, age 85, right hemisphere 420.6
Medial periolivary nuclei
nTPM: 436.1
2791 Male, age 74, right hemisphere 453.8
2063 Male, age 76, both hemispheres 448.9
2081 Male, age 80, both hemispheres 435.0
2171 Female, age 85, both hemispheres 434.0
2458 Female, age 91, both hemispheres 408.9
Medial vestibular nucleus
nTPM: 445.2
2801 Male, age 74, both hemispheres 471.5
2134 Male, age 76, both hemispheres 466.1
2743 Female, age 85, both hemispheres 442.7
2624 Male, age 61, both hemispheres 435.5
2803 Female, age 91, both hemispheres 430.5
2093 Male, age 80, both hemispheres 424.5
Motor facial nucleus
nTPM: 432.5
2062 Male, age 76, both hemispheres 451.1
2126 Male, age 61, both hemispheres 448.6
2365 Male, age 74, right hemisphere 432.0
2795 Female, age 91, both hemispheres 424.5
2697 Female, age 85, both hemispheres 424.3
2327 Male, age 80, both hemispheres 414.6
Motor hypoglossal nucleus
nTPM: 436.9
2277 Male, age 76, both hemispheres 469.7
2125 Female, age 91, both hemispheres 442.8
2132 Female, age 85, both hemispheres 426.8
2461 Male, age 61, both hemispheres 422.8
2182 Male, age 80, both hemispheres 422.1
Motor trigeminal nucleus
nTPM: 426.2
2309 Male, age 76, both hemispheres 434.9
2335 Male, age 61, both hemispheres 433.3
2560 Male, age 74, both hemispheres 430.1
2079 Male, age 80, both hemispheres 422.5
2321 Female, age 91, both hemispheres 410.3
Nuclei of the trapezoid body
nTPM: 435.9
1983 Male, age 76, both hemispheres 460.7
2735 Female, age 85, both hemispheres 444.8
2159 Male, age 61, both hemispheres 438.1
2166 Male, age 80, both hemispheres 418.1
2368 Female, age 91, both hemispheres 418.1
Nucleus ambiguus
nTPM: 457.7
2071 Male, age 76, both hemispheres 486.2
2096 Female, age 85, both hemispheres 429.1
Nucleus cuneatus
nTPM: 464.8
2808 Female, age 85, both hemispheres 570.9
2564 Male, age 74, both hemispheres 476.3
2562 Male, age 61, both hemispheres 451.1
2380 Male, age 80, both hemispheres 445.6
2805 Female, age 91, both hemispheres 424.0
2100 Male, age 76, both hemispheres 420.8
Nucleus gracilis
nTPM: 440.2
2627 Male, age 74, both hemispheres 462.1
2299 Female, age 85, both hemispheres 434.3
2382 Male, age 80, both hemispheres 424.2
Nucleus raphe magnus
nTPM: 439.3
2051 Male, age 76, both hemispheres 483.7
2160 Male, age 61, both hemispheres 451.0
2172 Female, age 85, both hemispheres 438.2
2455 Male, age 74, both hemispheres 430.3
2328 Male, age 80, both hemispheres 418.4
2459 Female, age 91, both hemispheres 414.1
Nucleus raphe obscurus
nTPM: 466.9
2142 Male, age 76, midline 488.3
2800 Male, age 61, midline 457.8
2845 Female, age 85, midline 454.5
Nucleus raphe pallidus
nTPM: 520.2
1924 Male, age 61, midline 643.8
2183 Male, age 80, midline 459.1
2145 Male, age 76, midline 457.8
Nucleus tractus solitarii
nTPM: 446.3
2144 Female, age 91, right hemisphere 473.5
2656 Male, age 76, both hemispheres 448.2
2307 Male, age 80, both hemispheres 433.3
2191 Female, age 85, both hemispheres 430.3
Paramedian reticular nucleus
nTPM: 449.7
2052 Male, age 76, both hemispheres 462.2
2057 Male, age 80, both hemispheres 454.4
2050 Female, age 85, both hemispheres 444.3
2313 Male, age 61, both hemispheres 437.9
Parvicellular reticular nuclei
nTPM: 436.8
2119 Male, age 80, both hemispheres 449.8
2095 Male, age 76, both hemispheres 447.5
2558 Male, age 74, both hemispheres 413.1
Parvicellular reticular nuclei, medullary
nTPM: 433.4
2181 Male, age 80, left hemisphere 434.9
2091 Female, age 85, both hemispheres 433.3
2189 Female, age 91, both hemispheres 431.8
Peritrigeminal nucleus
nTPM: 464.3
2067 Female, age 85, both hemispheres 477.6
2136 Male, age 76, both hemispheres 459.3
2179 Male, age 61, both hemispheres 456.1
Pontine nuclei
nTPM: 435.9
2727 Male, age 61, right hemisphere 461.2
2109 Female, age 72, unknown 451.0
2115 Male, age 80, left hemisphere 450.1
1863 Male, age 55, unknown 442.2
2787 Female, age 85, both hemispheres 441.3
1968 Male, age 76, left hemisphere 433.1
2454 Male, age 74, left hemisphere 404.4
2319 Female, age 91, both hemispheres 404.0
Pontine raphe nucleus
nTPM: 433.1
2853 Male, age 76, midline 436.4
2122 Female, age 85, midline 429.9
Posteroventral cochlear nucleus
nTPM: 439.1
2341 Male, age 80, both hemispheres 449.2
2070 Male, age 76, both hemispheres 446.0
2371 Male, age 61, both hemispheres 445.8
2752 Female, age 85, both hemispheres 435.8
2135 Female, age 91, both hemispheres 418.7
Prepositus hypoglossal nucleus
nTPM: 450.3
2855 Female, age 85, right hemisphere 455.6
2086 Male, age 80, both hemispheres 445.1
Principal sensory trigeminal nucleus
nTPM: 426.7
2158 Male, age 61, both hemispheres 442.0
2324 Male, age 76, both hemispheres 436.0
2008 Male, age 80, left hemisphere 427.3
2367 Female, age 91, left hemisphere 401.7
Reticular pontine nucleus, caudal
nTPM: 427.3
2092 Male, age 76, both hemispheres 450.1
2559 Male, age 74, both hemispheres 425.9
2457 Female, age 91, both hemispheres 417.5
2332 Male, age 80, right hemisphere 415.8
Reticular pontine nucleus, oral
nTPM: 426.4
2361 Male, age 74, both hemispheres 443.0
1939 Male, age 80, both hemispheres 441.2
2012 Female, age 85, both hemispheres 428.6
2167 Male, age 76, both hemispheres 422.0
2366 Female, age 91, both hemispheres 397.1
Reticulotegmental nucleus
nTPM: 433.0
2322 Female, age 91, both hemispheres 438.7
2452 Male, age 74, both hemispheres 437.9
2333 Male, age 80, both hemispheres 428.9
2325 Male, age 76, both hemispheres 426.7
Spinal trigeminal nucleus, caudal
nTPM: 433.0
2312 Male, age 61, both hemispheres 435.6
2447 Male, age 76, both hemispheres 435.6
2642 Male, age 74, both hemispheres 435.5
2390 Female, age 91, both hemispheres 431.1
2308 Male, age 80, both hemispheres 427.0
Spinal trigeminal nucleus, interpolar
nTPM: 438.1
2033 Male, age 80, both hemispheres 455.5
2066 Male, age 76, right hemisphere 455.0
2389 Female, age 91, both hemispheres 433.5
2386 Female, age 85, both hemispheres 425.1
2625 Male, age 61, both hemispheres 421.6
Spinal trigeminal nucleus, oral
nTPM: 429.0
1978 Male, age 76, both hemispheres 429.2
2737 Female, age 85, both hemispheres 429.1
2164 Male, age 80, both hemispheres 428.9
Spinal vestibular nucleus
nTPM: 441.9
2748 Male, age 76, both hemispheres 455.3
2780 Male, age 80, both hemispheres 453.1
2384 Male, age 74, both hemispheres 444.9
2806 Female, age 85, both hemispheres 440.0
2796 Male, age 61, both hemispheres 437.0
2186 Female, age 91, both hemispheres 421.1
Subcoeruleus area
nTPM: 428.0
2451 Male, age 74, both hemispheres 437.2
2323 Female, age 91, left hemisphere 432.6
1958 Male, age 80, both hemispheres 431.6
2089 Male, age 76, left hemisphere 420.4
2369 Female, age 85, left hemisphere 418.1
Superior olive
nTPM: 432.0
2364 Male, age 74, right hemisphere 446.0
1875 Female, age 85, both hemispheres 441.7
2020 Male, age 76, both hemispheres 439.2
2561 Female, age 91, both hemispheres 421.2
2329 Male, age 80, right hemisphere 412.1
Superior vestibular nucleus
nTPM: 489.1
2383 Male, age 74, both hemispheres 506.9
2061 Male, age 76, both hemispheres 495.2
2015 Male, age 80, both hemispheres 465.2
Ventral medullary reticular nucleus
nTPM: 438.5
2372 Male, age 61, both hemispheres 438.8
2060 Male, age 76, both hemispheres 438.3
Ventral periolivary nuclei
nTPM: 427.0
2023 Male, age 76, both hemispheres 435.0
2130 Female, age 85, both hemispheres 429.1
2165 Male, age 80, both hemispheres 425.9
2794 Female, age 91, left hemisphere 418.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 448.0
1986 Male, age 76, both hemispheres 465.6
2741 Female, age 85, both hemispheres 457.4
2180 Male, age 61, both hemispheres 452.5
2302 Female, age 91, both hemispheres 434.5
2118 Male, age 80, both hemispheres 429.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 432.8
2840 Female, age 85, both hemispheres 447.1
1959 Male, age 76, both hemispheres 437.8
2359 Male, age 61, both hemispheres 434.9
2161 Male, age 80, both hemispheres 433.7
2449 Male, age 74, both hemispheres 425.7
2456 Female, age 91, both hemispheres 417.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 82.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 80.3
FF:10165-103B3 76 years, female 90.9
FF:10182-103D2 60 years, female 69.6
Medulla oblongata
Scaled Tags Per Million: 82.8
FF:10174-103C3 60 years, female 98.3
FF:10155-103A2 76 years, female 92.9
FF:10038-101F2 18-64 years, mixed 57.1
Pons
Scaled Tags Per Million: 18.0
FF:10033-101E6 18-54 years, mixed 18.0

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 91.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 91.9
Samples: 4

Max nTPM: 159.6
Min nTPM: 26.7
Sample A Female 85.4
Sample B Female 26.7
Sample C Male 96.0
Sample D Male 159.6
Pons
nTPM: 57.8
Samples: 4

Max nTPM: 88.2
Min nTPM: 25.5
Sample A Female 64.6
Sample B Female 25.5
Sample C Male 52.7
Sample D Male 88.2

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 50.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 50.1
Samples: 4

Max nTPM: 62.7
Min nTPM: 44.6
Sample A Male 46.0
Sample B Male 47.0
Sample C Female 44.6
Sample D Female 62.7

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.1
77278967 Antisense, RP_070116_01_A03, Mouse strain C57BL/6J (56 days, male) 0.1
75695667 Antisense, RP_060518_04_D06, Mouse strain C57BL/6J (56 days, male) 0.1
Pons
Expression energy: 0.1
75695667 Antisense, RP_060518_04_D06, Mouse strain C57BL/6J (56 days, male) 0.2
77278967 Antisense, RP_070116_01_A03, Mouse strain C57BL/6J (56 days, male) 0.1

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