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RPL39
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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1342.4 nTPM
HPA:1342.4 nTPM
FANTOM5:20.7 Scaled Tags Per Million
Pig:355.0 nTPM

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 1342.4
Sample id Sample description nTPM
Area postrema
nTPM: 1308.1
2799 Male, age 61, both hemispheres 1343.1
2306 Male, age 80, both hemispheres 1313.4
2054 Male, age 76, both hemispheres 1268.0
Cuneate nuclei
nTPM: 1292.0
2376 Male, age 61, both hemispheres 1331.3
2381 Male, age 80, both hemispheres 1295.8
2131 Male, age 76, both hemispheres 1248.8
Dorsal medullary reticular nucleus
nTPM: 1301.1
2040 Female, age 85, both hemispheres 1324.1
2373 Male, age 61, both hemispheres 1314.3
2088 Male, age 76, both hemispheres 1264.8
Dorsal motor vagal complex
nTPM: 1300.0
2797 Male, age 61, both hemispheres 1375.6
2807 Female, age 85, both hemispheres 1332.2
2643 Male, age 74, both hemispheres 1321.5
2133 Female, age 91, both hemispheres 1303.1
2844 Male, age 55, unknown 1281.4
2000 Male, age 74, unknown 1270.3
2813 Female, age 72, unknown 1259.8
2185 Male, age 76, both hemispheres 1256.0
Gigantocellular reticular nuclei, medullary
nTPM: 1302.2
2314 Male, age 61, both hemispheres 1323.0
2387 Female, age 91, both hemispheres 1320.4
1876 Female, age 85, both hemispheres 1314.1
2022 Male, age 76, right hemisphere 1299.9
2310 Male, age 80, both hemispheres 1280.3
2462 Male, age 74, both hemispheres 1275.6
Gigantocellular reticular nuclei, pars
nTPM: 1271.8
2084 Female, age 85, both hemispheres 1301.9
2706 Male, age 80, both hemispheres 1275.9
2336 Male, age 61, both hemispheres 1266.6
2330 Male, age 80, both hemispheres 1260.3
2168 Male, age 76, both hemispheres 1254.5
Inferior olive
nTPM: 1309.5
2379 Male, age 80, both hemispheres 1326.4
2178 Male, age 61, both hemispheres 1317.9
2563 Male, age 74, both hemispheres 1312.5
2085 Female, age 85, both hemispheres 1307.0
2628 Female, age 91, both hemispheres 1283.9
Lateral medullary reticular nucleus
nTPM: 1310.5
2190 Female, age 85, both hemispheres 1337.0
2852 Male, age 80, both hemispheres 1332.2
2804 Female, age 91, both hemispheres 1321.1
2305 Male, age 74, both hemispheres 1302.4
2044 Male, age 76, both hemispheres 1291.4
2374 Male, age 61, both hemispheres 1279.0
Medial vestibular nucleus
nTPM: 1290.5
2803 Female, age 91, both hemispheres 1326.8
2743 Female, age 85, both hemispheres 1307.2
2093 Male, age 80, both hemispheres 1289.2
2624 Male, age 61, both hemispheres 1282.0
2801 Male, age 74, both hemispheres 1272.0
2134 Male, age 76, both hemispheres 1265.9
Motor hypoglossal nucleus
nTPM: 1273.5
2132 Female, age 85, both hemispheres 1318.1
2125 Female, age 91, both hemispheres 1300.6
2182 Male, age 80, both hemispheres 1269.3
2277 Male, age 76, both hemispheres 1250.6
2461 Male, age 61, both hemispheres 1228.7
Nucleus ambiguus
nTPM: 1275.5
2071 Male, age 76, both hemispheres 1313.7
2096 Female, age 85, both hemispheres 1237.3
Nucleus cuneatus
nTPM: 1304.8
2808 Female, age 85, both hemispheres 1345.4
2380 Male, age 80, both hemispheres 1335.2
2564 Male, age 74, both hemispheres 1304.5
2562 Male, age 61, both hemispheres 1296.1
2805 Female, age 91, both hemispheres 1295.8
2100 Male, age 76, both hemispheres 1251.7
Nucleus gracilis
nTPM: 1303.8
2382 Male, age 80, both hemispheres 1315.0
2299 Female, age 85, both hemispheres 1301.1
2627 Male, age 74, both hemispheres 1295.2
Nucleus raphe magnus
nTPM: 1271.7
2051 Male, age 76, both hemispheres 1285.0
2459 Female, age 91, both hemispheres 1276.7
2455 Male, age 74, both hemispheres 1272.9
2328 Male, age 80, both hemispheres 1270.7
2160 Male, age 61, both hemispheres 1269.3
2172 Female, age 85, both hemispheres 1255.9
Nucleus raphe obscurus
nTPM: 1342.4
2845 Female, age 85, midline 1350.1
2800 Male, age 61, midline 1347.2
2142 Male, age 76, midline 1329.8
Nucleus raphe pallidus
nTPM: 1328.5
1924 Male, age 61, midline 1383.3
2145 Male, age 76, midline 1305.3
2183 Male, age 80, midline 1297.0
Nucleus tractus solitarii
nTPM: 1290.5
2144 Female, age 91, right hemisphere 1338.7
2191 Female, age 85, both hemispheres 1305.2
2656 Male, age 76, both hemispheres 1264.3
2307 Male, age 80, both hemispheres 1253.8
Parvicellular reticular nuclei
nTPM: 1289.6
2119 Male, age 80, both hemispheres 1312.2
2095 Male, age 76, both hemispheres 1301.1
2558 Male, age 74, both hemispheres 1255.4
Parvicellular reticular nuclei, medullary
nTPM: 1289.9
2091 Female, age 85, both hemispheres 1306.6
2189 Female, age 91, both hemispheres 1290.9
2181 Male, age 80, left hemisphere 1272.2
Peritrigeminal nucleus
nTPM: 1324.4
2067 Female, age 85, both hemispheres 1361.9
2136 Male, age 76, both hemispheres 1322.8
2179 Male, age 61, both hemispheres 1288.3
Prepositus hypoglossal nucleus
nTPM: 1311.2
2855 Female, age 85, right hemisphere 1324.1
2086 Male, age 80, both hemispheres 1298.4
Spinal trigeminal nucleus, caudal
nTPM: 1281.6
2390 Female, age 91, both hemispheres 1290.5
2642 Male, age 74, both hemispheres 1289.3
2308 Male, age 80, both hemispheres 1288.3
2312 Male, age 61, both hemispheres 1281.6
2447 Male, age 76, both hemispheres 1258.3
Spinal trigeminal nucleus, interpolar
nTPM: 1303.5
2033 Male, age 80, both hemispheres 1325.7
2386 Female, age 85, both hemispheres 1318.6
2389 Female, age 91, both hemispheres 1302.9
2066 Male, age 76, right hemisphere 1302.3
2625 Male, age 61, both hemispheres 1267.8
Spinal vestibular nucleus
nTPM: 1316.7
2384 Male, age 74, both hemispheres 1363.1
2806 Female, age 85, both hemispheres 1328.9
2780 Male, age 80, both hemispheres 1311.4
2796 Male, age 61, both hemispheres 1310.7
2186 Female, age 91, both hemispheres 1293.4
2748 Male, age 76, both hemispheres 1292.8
Ventral medullary reticular nucleus
nTPM: 1304.7
2372 Male, age 61, both hemispheres 1336.6
2060 Male, age 76, both hemispheres 1272.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 1322.0
2118 Male, age 80, both hemispheres 1349.4
2741 Female, age 85, both hemispheres 1324.5
2302 Female, age 91, both hemispheres 1316.2
1986 Male, age 76, both hemispheres 1312.3
2180 Male, age 61, both hemispheres 1307.6

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 20.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 20.7
FF:10174-103C3 60 years, female 31.1
FF:10155-103A2 76 years, female 21.2
FF:10038-101F2 18-64 years, mixed 9.8

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 355.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 355.0
Samples: 4

Max nTPM: 449.4
Min nTPM: 277.1
Sample A Female 277.1
Sample B Female 291.6
Sample C Male 401.7
Sample D Male 449.4

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.