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RACK1
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:239.4 nTPM
FANTOM5:557.5 Scaled Tags Per Million
Pig:108.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody CAB004288
Glial cells Medium
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 239.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 239.4
Samples: 246

Max nTPM: 544.4
Min nTPM: 138.3
Std nTPM: 55.3
Median nTPM: 232.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 544.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 520.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 429.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 374.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 372.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 361.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 355.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 354.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 353.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 345.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 343.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 337.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 332.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 330.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 325.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 325.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 323.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 322.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 319.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 316.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 310.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 308.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 308.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 302.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 302.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 301.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 299.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 299.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 297.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 294.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 293.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 293.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 292.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 292.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 292.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 290.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 289.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 287.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 287.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 287.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 286.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 285.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 284.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 284.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 282.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 281.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 279.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 278.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 278.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 277.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 276.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 276.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 275.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 275.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 273.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 272.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 271.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 271.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 270.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 269.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 265.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 265.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 264.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 264.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 264.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 263.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 263.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 263.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 263.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 262.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 261.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 261.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 260.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 256.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 256.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 255.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 254.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 254.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 253.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 253.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 253.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 253.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 252.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 252.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 252.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 251.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 251.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 250.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 249.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 248.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 247.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 246.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 246.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 246.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 244.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 243.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 243.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 243.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 243.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 243.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 242.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 242.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 242.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 242.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 242.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 241.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 241.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 240.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 240.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 239.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 239.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 239.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 238.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 238.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 237.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 237.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 236.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 235.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 234.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 234.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 234.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 233.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 233.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 232.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 232.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 230.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 230.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 230.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 230.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 230.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 228.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 228.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 226.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 226.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 225.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 225.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 224.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 224.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 223.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 222.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 222.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 222.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 221.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 221.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 221.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 221.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 220.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 220.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 220.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 220.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 219.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 219.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 218.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 217.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 217.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 217.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 216.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 216.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 216.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 215.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 214.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 214.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 211.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 211.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 211.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 210.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 209.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 209.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 209.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 209.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 208.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 208.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 208.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 207.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 207.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 207.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 205.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 205.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 204.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 203.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 203.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 203.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 201.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 201.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 201.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 199.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 198.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 198.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 198.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 197.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 196.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 195.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 194.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 194.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 193.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 193.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 193.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 192.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 192.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 192.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 191.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 191.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 191.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 190.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 190.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 188.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 188.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 188.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 188.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 187.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 185.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 185.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 183.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 183.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 183.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 182.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 181.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 181.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 181.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 181.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 180.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 178.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 178.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 177.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 177.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 176.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 175.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 173.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 172.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 172.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 171.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 171.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 169.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 167.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 167.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 166.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 166.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 165.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 165.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 164.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 164.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 164.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 162.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 155.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 144.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 138.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 557.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 557.5
FF:10164-103B2 76 years, female 557.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 108.3
Pig sample Sample description nTPM
Caudate
nTPM: 108.3
Samples: 4

Max nTPM: 124.3
Min nTPM: 88.9
Sample A Female 102.1
Sample B Female 117.7
Sample C Male 124.3
Sample D Male 88.9

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